Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 489 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 300 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464255.4789221-UTR-Ecto-sp13_S_contig9955:2370..2497 | 1681464255.4789221-UTR-Ecto-sp13_S_contig9955:2370..2497 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig9955 2371..2497 + |
| 1681464255.5043046-UTR-Ecto-sp13_S_contig9955:2797..2859 | 1681464255.5043046-UTR-Ecto-sp13_S_contig9955:2797..2859 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig9955 2798..2859 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464255.4909558-CDS-Ecto-sp13_S_contig9955:2497..2797 | 1681464255.4909558-CDS-Ecto-sp13_S_contig9955:2497..2797 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9955 2498..2797 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9955.21603.1 >prot_Ecto-sp13_S_contig9955.21603.1 ID=prot_Ecto-sp13_S_contig9955.21603.1|Name=mRNA_Ecto-sp13_S_contig9955.21603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
MTTLLVLNPPASLGQSRGDLSLLLSRACCARSQCIRSTQSFGNLGGVCGM
HGGPNGVAGEGVHLSATTLLWWSGMSDRGEQRGAMMILQPSICRSHCCT* back to topmRNA from alignment at Ecto-sp13_S_contig9955:2371..2859+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig9955.21603.1 ID=mRNA_Ecto-sp13_S_contig9955.21603.1|Name=mRNA_Ecto-sp13_S_contig9955.21603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=489bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9955:2371..2859+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCCTCTCCTCGCTGCAAGTGTACGTGCGCGTGTGACTGCAGGTAGAAGG
GTAGACTGGTTGTTCACGCCGCGTGGCTGAAGTTGGATAAAGTTGTATAG
AGTTTACTTCAACAGCAGCAGCAGCATATGACGACTCTCTTGGTGCTGAA
TCCCCCAGCATCTCTGGGGCAATCTCGGGGCGACCTGTCACTGCTGTTGA
GCCGTGCTTGCTGTGCACGATCGCAGTGCATCCGAAGCACACAGAGCTTC
GGGAACCTCGGTGGTGTGTGTGGCATGCATGGTGGGCCGAATGGTGTAGC
TGGGGAAGGTGTCCACCTTAGTGCGACGACTCTCCTGTGGTGGTCAGGGA
TGAGCGACAGAGGTGAGCAGCGAGGTGCAATGATGATACTTCAACCGTCG
ATTTGCCGCTCTCACTGCTGTACGTAACCACACCCTGGATAACACCCTGT
TGGACAGGCTATTGGTCGTCAGAATAGGTATTGGAGCAG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig9955:2371..2859+ >mRNA_Ecto-sp13_S_contig9955.21603.1 ID=mRNA_Ecto-sp13_S_contig9955.21603.1|Name=mRNA_Ecto-sp13_S_contig9955.21603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=300bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9955:2371..2859+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGACTCTCTTGGTGCTGAATCCCCCAGCATCTCTGGGGCAATCTCG
GGGCGACCTGTCACTGCTGTTGAGCCGTGCTTGCTGTGCACGATCGCAGT
GCATCCGAAGCACACAGAGCTTCGGGAACCTCGGTGGTGTGTGTGGCATG
CATGGTGGGCCGAATGGTGTAGCTGGGGAAGGTGTCCACCTTAGTGCGAC
GACTCTCCTGTGGTGGTCAGGGATGAGCGACAGAGGTGAGCAGCGAGGTG
CAATGATGATACTTCAACCGTCGATTTGCCGCTCTCACTGCTGTACGTAA back to top
|