Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Model size | 1040 |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Cds size | 546 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681464255.3600583-CDS-Ecto-sp13_S_contig9954:4770..5316 | 1681464255.3600583-CDS-Ecto-sp13_S_contig9954:4770..5316 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9954 4771..5316 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681464255.3765182-UTR-Ecto-sp13_S_contig9954:5316..5810 | 1681464255.3765182-UTR-Ecto-sp13_S_contig9954:5316..5810 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig9954 5317..5810 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9954.21602.1 >prot_Ecto-sp13_S_contig9954.21602.1 ID=prot_Ecto-sp13_S_contig9954.21602.1|Name=mRNA_Ecto-sp13_S_contig9954.21602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MLPFRTTAVLTVGFGVVHRRGCPRANDPLPAAAVLPATQAPVSEPVGVSH LPAAGGARRWWCSGRLTRCCRYQASSGPGTARLPRISGGGGALLCRRRRC RYHRLCYYCRRRRRWGWRRWRRRRLCCRWFAPHPVAQFAHRAPLGLSALL RRHSAVWWVRGGWAAREGQAMGWGPSGGKQR* back to topmRNA from alignment at Ecto-sp13_S_contig9954:4771..5810+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig9954.21602.1 ID=mRNA_Ecto-sp13_S_contig9954.21602.1|Name=mRNA_Ecto-sp13_S_contig9954.21602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1040bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9954:4771..5810+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGCTTCCTTTTCGCACTACAGCAGTACTTACCGTTGGCTTTGGTGTTGT
GCATCGCCGAGGGTGTCCCCGGGCGAACGATCCTCTCCCTGCTGCTGCCG
TCCTTCCTGCGACACAGGCGCCGGTCTCGGAGCCGGTGGGAGTGTCGCAT
CTTCCCGCCGCTGGCGGCGCAAGGCGGTGGTGGTGCAGCGGTAGGTTGAC
GCGGTGCTGCCGGTACCAAGCAAGCTCTGGACCAGGTACCGCCCGCCTCC
CAAGGATTTCGGGAGGGGGTGGGGCACTTTTGTGCCGTCGTCGGCGGTGT
CGCTACCATCGTCTTTGTTACTATTGCCGCCGCCGCCGGCGGTGGGGGTG
GCGACGGTGGCGGCGGCGACGGTTATGCTGTCGCTGGTTTGCTCCTCATC
CCGTTGCACAGTTCGCTCATCGAGCTCCTCTTGGTTTGTCTGCTCTCCTC
CGTCGGCACTCTGCAGTCTGGTGGGTACGTGGCGGGTGGGCTGCTCGTGA
GGGACAAGCGATGGGATGGGGCCCGTCTGGCGGGAAGCAGCGGTGACCCT
TCTGCTGTAATAGCCGCCTCTGCTCCTGTATCTGTCGCGTGAACTGCGAG
GGCGCGGAAGAGGACTTACGTCGGAATCCTGCATCATGTTGCTCCGCGAG
ACAGCTCCTGACCCACCCCTGCTGCTGCTGCTGCTACTGCTGCGAATGCC
GCTAGGCAGAAGGAATCCACACCCAATGGCGCAGCAGATGGCGAGGAATA
GCAGGAGGGTCGGCTTGGCGGCAGGCAGAAGACGACAGAAGACCATGGTT
GCCTTGTGAAATGGCGTCCCTCACCTCCCTCTCGCTCGTTCTCTTCTGAT
GATCAAAATCTGATCCGGTCCAGCGCCTTGCTCAAATATGCGAATATCCT
AGCAGTGAAACACGTGTCACCACCCCTCGCCGAGAACAAGCAAGCGCCTC
AGGCACGCGACAGGGATGCTGACCCCAACCCTAAGCGCGTGCTGGTTCGC
CCCAGTGCGAGCTGCACTAGCGAAGGCGGTGTGCGTGTGC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig9954:4771..5810+ >mRNA_Ecto-sp13_S_contig9954.21602.1 ID=mRNA_Ecto-sp13_S_contig9954.21602.1|Name=mRNA_Ecto-sp13_S_contig9954.21602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9954:4771..5810+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGCTTCCTTTTCGCACTACAGCAGTACTTACCGTTGGCTTTGGTGTTGT GCATCGCCGAGGGTGTCCCCGGGCGAACGATCCTCTCCCTGCTGCTGCCG TCCTTCCTGCGACACAGGCGCCGGTCTCGGAGCCGGTGGGAGTGTCGCAT CTTCCCGCCGCTGGCGGCGCAAGGCGGTGGTGGTGCAGCGGTAGGTTGAC GCGGTGCTGCCGGTACCAAGCAAGCTCTGGACCAGGTACCGCCCGCCTCC CAAGGATTTCGGGAGGGGGTGGGGCACTTTTGTGCCGTCGTCGGCGGTGT CGCTACCATCGTCTTTGTTACTATTGCCGCCGCCGCCGGCGGTGGGGGTG GCGACGGTGGCGGCGGCGACGGTTATGCTGTCGCTGGTTTGCTCCTCATC CCGTTGCACAGTTCGCTCATCGAGCTCCTCTTGGTTTGTCTGCTCTCCTC CGTCGGCACTCTGCAGTCTGGTGGGTACGTGGCGGGTGGGCTGCTCGTGA GGGACAAGCGATGGGATGGGGCCCGTCTGGCGGGAAGCAGCGGTGA back to top
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