mRNA_Ecto-sp13_S_contig9951.21599.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: D7FJL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL8_ECTSI) HSP 1 Score: 577 bits (1488), Expect = 1.680e-202 Identity = 294/307 (95.77%), Postives = 300/307 (97.72%), Query Frame = 1 Query: 4 LGEQLDEILVWSPKSEIMKRAKSTGGRT-TGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGDDLVESVLKEGTGGAMGETSCPSNFVAEAIVDREV 921 LGEQLDEI+VWSPKSEIMKRAKSTGGRT TGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFS LEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSF+EESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVT+SGSQAGKQATAR VLRETGHLVGVRLKDCGSSKSFEAPP VYVSAPADPEGVQA+ARAILDKRQG ISAIEITNPGSGYNTALAPVTVEVFGS+VDETGD LVESVL EGTGGAMGET+CPSNFVAEAIVDREV Sbjct: 20 LGEQLDEIVVWSPKSEIMKRAKSTGGRTATGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSMLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFMEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTVSGSQAGKQATARVVLRETGHLVGVRLKDCGSSKSFEAPPRVYVSAPADPEGVQAEARAILDKRQGSISAIEITNPGSGYNTALAPVTVEVFGSDVDETGDYLVESVLNEGTGGAMGETACPSNFVAEAIVDREV 326
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A6H5LAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAW5_9PHAE) HSP 1 Score: 589 bits (1518), Expect = 4.450e-202 Identity = 299/305 (98.03%), Postives = 304/305 (99.67%), Query Frame = 1 Query: 10 EQLDEILVWSPKSEIMKRAKSTGGRT-TGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGDDLVESVLKEGTGGAMGETSCPSNFVAEAIVDREV 921 EQLDEILVWSPKSEIMKRAKSTGGRT TGTNETYPVRFVTYLARFLLNYD+ASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKR+GFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGD+LVESVLKEGTGGA+GET+CPSNFVAEAIVDREV Sbjct: 249 EQLDEILVWSPKSEIMKRAKSTGGRTATGTNETYPVRFVTYLARFLLNYDRASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRKGFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGDELVESVLKEGTGGALGETACPSNFVAEAIVDREV 553
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A835ZA12_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA12_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.590e-53 Identity = 140/376 (37.23%), Postives = 183/376 (48.67%), Query Frame = 1 Query: 19 DEILVWSPKSEIMKRAKSTGGRTTGTN---ETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECK------RQLAILFSFIEESQPTESIEL----------------------LLGEVDNGQVNNIVVTDPGGGYTGKVPK-VTISGSQAGKQ-ATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQ------------------------------------AKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVFG-SEVDETGDDLVESVLKEGTGGA-----MGETSCPSNFVAEAIVDREV 921 D LVWSP+S I++RAK GGR N TY RFVTYLARFLLNYD+ SRQLW+R A IP + E RR QFAEFA AV+VGLLD+QG QG +A FSL+RSRYG G + K RQLAILFSF+ QP ++ +LGE+D+ ++ I V G GY+ P VTIS Q G + A A AVL ETG + +RL + +++PP A A+LD G + A+++ PG+GYN+A APVTV++ G +++D G V S G GG G +C + A++D V Sbjct: 28 DTDLVWSPRSAILERAKGAGGRAAPENLKNSTYGPRFVTYLARFLLNYDRGSRQLWERRAQDIPSSIPVREATKQRRQQFAEFAGAVEVGLLDYQGAQGARALFSLLRSRYGWGADSKGGEERLRQLAILFSFLNRYQPVAQLQAXXXXXXXXXXXXXXXXXXXXXSVLGEIDDAGISQISVVTGGSGYSADAPPAVTISQPQWGTRGAQASAVLGETGRIAALRLAGSPCAYRYQSPPEXXXXXXXXXXXXXXXXXXXRCAVXXXXXXXXXXXXXXXXXXXXXXXXXXATGEAVLDAT-GRLIAVKLLQPGAGYNSAEAPVTVDLVGVADIDMPG---VNSATLTGAGGVGASDEQGIMACGAYPQVTAVLDTAV 399
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: W7TIQ8_9STRA (Mitochondrial phosphate carrier protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIQ8_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.380e-44 Identity = 105/269 (39.03%), Postives = 149/269 (55.39%), Query Frame = 1 Query: 4 LGEQLDE--ILVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVP-KVTISGSQ--AGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPA-DPEGVQAKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVF 792 LGE+ + L W SE+ RA+ + G +TYPVRFVTYL RFL+N+D+ + LW ++A IP + V RR QFA A + ++GL D+QG +G++ F L++ RYGQ E +RQLAILFSF+E+ QP + I +L + DN +V + G GYT + P +VTIS + A ARAVLRETG L + L GS + PP V +S P P+ +A+A A+L++ G + PVTV + Sbjct: 271 LGEKANRKGYLGWRRLSEVEGRARD---QNRG-QKTYPVRFVTYLTRFLVNFDEDDKLLWAKLARDIPFTYKEALVAETRRGQFAAIADSAEIGLYDYQGTEGVQRLFELLKDRYGQTSEARRQLAILFSFLEKDQPVQGIARMLVDTDNARVAAFRLVTGGDGYTARTPPRVTISSPMMPTPQPARARAVLRETGSLRRLVLTSSGSIYTQGIPPEVVISEPPRGPDARRARAEAVLERGTGRVXXXXXXXXXXXXRKDGPPVTVTIL 535
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A0M0K1B3_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K1B3_9EUKA) HSP 1 Score: 168 bits (426), Expect = 1.850e-43 Identity = 107/282 (37.94%), Postives = 155/282 (54.96%), Query Frame = 1 Query: 25 ILVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEES-QPTESIELLLGEVDNGQVNNIVVTDPGGGYTG-KVPKVTISGSQAG-----KQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGDDLVESVLKEG 849 +L W P+S I + + T +Y RF+TYLARFLLN+D+ S W + +P+ + + AVR QF +F+++V+VGL+ +QG QG++ FSLMRSRYG+ K QLA+LFS I + QP++ IE LGE +NG VN + +T G GYT + PKVT++ G A RAVL +G++ GV L + G + + P V S P D G A+A AI++ G + A+E+ G GY A V DE G L + + +G Sbjct: 42 VLEWEPRSSIPRLTEKT---------SYQPRFITYLARFLLNFDRGSAAWWAEQSRQLPVGLNREALRAVRERQFGQFSESVEVGLVRYQGQQGVRVLFSLMRSRYGKTPLAKVQLALLFSLISAANQPSDLIENALGEAENGHVNQVFLTSGGRGYTSAEPPKVTLTPPDGGLGKMKTPAQIRAVLEVSGNVRGVTLTNSGGG--YSSAPAVSFSPPRD-GGRPAEAIAIVEG--GRVVAVEMMYAGDGYTERDANSVVVTIEPPRDEQGVPLADGISAQG 309
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A7S2CVF3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CVF3_9EUKA) HSP 1 Score: 141 bits (355), Expect = 1.630e-37 Identity = 73/170 (42.94%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 28 LVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEES-QPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQA 534 LVW P+S + +A+S+ +Y RFVTYLARFLLN+D S W +P S E+ A+R+ F +F+++V+VGLL +QG G++ FSL+RSRYG + K QLA+LFS I S QP + IE LGEV+ G + I +T+PG GYT + P + + A Sbjct: 32 LVWQPRSSVPVKAQSS---------SYAPRFVTYLARFLLNFDAGSAAWWAEQGQRLPSKLSRDELAAIRQKSFGQFSESVEVGLLKYQGRTGVRNLFSLLRSRYGSSAQAKIQLALLFSLISASNQPVDKIERALGEVEQGAIKVITLTNPGSGYTNRTPPAVLVSAPA 192
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A7S4FCX2_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCX2_CHRCT) HSP 1 Score: 132 bits (332), Expect = 2.930e-34 Identity = 80/167 (47.90%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 28 LVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQ-GIKAFFSLMRSRYGQGEECKRQLAILFSFIEES-QPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTIS 522 LVW P+SE+ RA +GG YP RFVTYLARFLLNYD SRQ W ++++P+ S + +R QF +F+++VQVGL F P G + +SL+RSRYG + K QLAILFS I QP++ I LGE DN V I V D G GYT + P V IS Sbjct: 17 LVWEPRSELPVRA--SGG------VEYPPRFVTYLARFLLNYDAGSRQWWSDQSSSLPLGVSRAALVELRIKQFEQFSQSVQVGLQQFSKPMDGPRQLYSLLRSRYGVSRQNKLQLAILFSLIPAPRQPSDLIRRALGEYDNASVATITVIDGGSGYT-EAPVVAIS 174
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A6S8WEP6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8WEP6_9STRA) HSP 1 Score: 139 bits (349), Expect = 5.130e-33 Identity = 96/288 (33.33%), Postives = 143/288 (49.65%), Query Frame = 1 Query: 22 EILVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYG----------------------------QGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAG------KQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPE-----GVQAKARAILDK---RQGFISAIEITNPGSGYN 759 E + W+ S + KR+ G ETY VRF+TYL+RFLL++D ++ W + A IP S +VE+ R QF F+ +V+VGL +++G +G K L+ RYG + +E KRQ+A+LFS ++ QP E I LL +DNG V +V+ +PGGGY + + ++ G AT RAVLR +G ++ V + G + PP V +S P + A A+A L K +G I I +T+PG+GYN Sbjct: 164 EEITWTA-SPVNKRS---GVSFFKAEETYNVRFITYLSRFLLSFDDECQKWWYQRAKDIPRTASADQVESKRLSQFGAFSASVEVGLQEYEGAEGPKQLIKLLLDRYGGDLEEVKAAREVKGQAALKPNEEEMEKREIKEAKRQIALLFSLLKTYQPVEEITALLAAIDNGMVKKVVIENPGGGYAPEYGEPVVTFPPPGGYVDGINAATGRAVLRPSGKVLRVDISKRGFG--YTKPPTVVISPPIAEDFGSLTAKAATAKASLFKDGVNEGRIERILLTSPGNGYN 445
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A8J6C5U2_DIALT (Uncharacterized protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5U2_DIALT) HSP 1 Score: 126 bits (316), Expect = 1.170e-28 Identity = 83/231 (35.93%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 31 VWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGL-LDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEES-QPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPK--------VTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARA 693 VW P ++RA + E YP RF TYLARFLL YD+ SR+ W+ A IP++FS +V +R + +AEF ++V++GL ++ GP+G++ L+R+R+ E +RQLA+L + + + QP + LLGE DN V + V D G GY P + +G + G +A RAV+ E G +V V + G SF P + + AP P A RA Sbjct: 76 VWMP----LERAMGSSPGDARGREEYPPRFSTYLARFLLKYDRKSRRWWNSKAEEIPLSFSASKVRELRLEHYAEFTRSVELGLEREYAGPRGVQELVQLLRARFTSTAE-RRQLALLLTLLPPAHQPAADVAELLGEADNATVRTVRVLDGGAGYDELAPPDVALTPPAASTAGGRNGARAQLRAVV-ERGRVVAVEVLAPGLGYSFVQPLELTI-APXPPHRTAAPPRA 299
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A7S3ZFI1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZFI1_9EUKA) HSP 1 Score: 118 bits (296), Expect = 1.520e-28 Identity = 64/158 (40.51%), Postives = 98/158 (62.03%), Query Frame = 1 Query: 100 ETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFI-EESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISG--SQAGKQATARAVL 564 + +P+RFVTYL RFLLNYD S + W++ IP+++++ +V +R Q+ +FA +V++GL F+ +GI A + + + + KRQL+ILFSF+ + QP IE L+ E DN V+ I VTD G GY + P V IS ++G ATA+A + Sbjct: 56 QVFPLRFVTYLTRFLLNYDAKSSKFWEQAGANIPLSYTSEQVREMRLRQYGDFAASVELGLKPFESKEGIIALTTALSNTF-TSNSAKRQLSILFSFLTNDDQPVSYIESLIAEADNATVSQITVTDAGSGYL-RPPAVRISSPIGRSGATATAKAAM 211 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9951.21599.1 >prot_Ecto-sp13_S_contig9951.21599.1 ID=prot_Ecto-sp13_S_contig9951.21599.1|Name=mRNA_Ecto-sp13_S_contig9951.21599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp KLGEQLDEILVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNback to top mRNA from alignment at Ecto-sp13_S_contig9951:858..5602+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9951.21599.1 ID=mRNA_Ecto-sp13_S_contig9951.21599.1|Name=mRNA_Ecto-sp13_S_contig9951.21599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4745bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9951:858..5602+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9951:858..5602+ >mRNA_Ecto-sp13_S_contig9951.21599.1 ID=mRNA_Ecto-sp13_S_contig9951.21599.1|Name=mRNA_Ecto-sp13_S_contig9951.21599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9951:858..5602+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |