mRNA_Ecto-sp13_S_contig99373.21585.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: A0A6H5K166_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K166_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 5.420e-19 Identity = 40/44 (90.91%), Postives = 44/44 (100.00%), Query Frame = 1 Query: 22 KKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVQQ 153 ++VSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKV++ Sbjct: 761 QQVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVRE 804
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: D7FUM0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUM0_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 7.400e-19 Identity = 39/44 (88.64%), Postives = 44/44 (100.00%), Query Frame = 1 Query: 22 KKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVQQ 153 ++VSYTSWFLDAFNYALFLGVDI+NLSIGGPDFKDQPFVDKV++ Sbjct: 486 EQVSYTSWFLDAFNYALFLGVDIVNLSIGGPDFKDQPFVDKVRE 529
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: A0A7S1XRI8_9STRA (Subtilisin n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRI8_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.800e-15 Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1 Query: 22 KKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVQQ 153 +++SYTSWFLDAFNYALFL VD++NLSIGGPDF DQPF DKV + Sbjct: 132 QQMSYTSWFLDAFNYALFLQVDVLNLSIGGPDFLDQPFADKVHE 175
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: A0A336MN80_CULSO (CSON001589 protein n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336MN80_CULSO) HSP 1 Score: 77.0 bits (188), Expect = 3.350e-15 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 1 Query: 22 KKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVQQ 153 +VSYTSWFLDAFNYA+F G++I+NLSIGGPDF D+PFV+KVQ+ Sbjct: 247 NQVSYTSWFLDAFNYAIFKGINILNLSIGGPDFLDKPFVEKVQE 290
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: A0A336LTD3_CULSO (CSON004411 protein n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336LTD3_CULSO) HSP 1 Score: 77.0 bits (188), Expect = 3.350e-15 Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 1 Query: 22 KKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVQQ 153 +VSYTSWFLDAFNYA+F G++I+NLSIGGPDF D+PFV+KVQ+ Sbjct: 576 NQVSYTSWFLDAFNYAIFKGINILNLSIGGPDFLDKPFVEKVQE 619
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: T2MD49_HYDVU (Membrane-bound transcription factor site-1 protease n=3 Tax=Hydra vulgaris TaxID=6087 RepID=T2MD49_HYDVU) HSP 1 Score: 75.5 bits (184), Expect = 1.170e-14 Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 1 Query: 22 KKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKV 147 K+VSYTSWFLDAFNYA+ +DI+NLSIGGPDF D+PFVDKV Sbjct: 250 KQVSYTSWFLDAFNYAILKNIDILNLSIGGPDFMDKPFVDKV 291
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: A0A5D6XLG2_9STRA (Subtilisin n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLG2_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.170e-14 Identity = 31/44 (70.45%), Postives = 41/44 (93.18%), Query Frame = 1 Query: 22 KKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVQQ 153 +++S+TSWFLDAFNYALF GV ++NLS GGPDF+D+PFVDK+Q+ Sbjct: 268 EQLSFTSWFLDAFNYALFQGVHVLNLSTGGPDFRDRPFVDKIQE 311
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: R7QB87_CHOCR (Peptidase_S8 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB87_CHOCR) HSP 1 Score: 75.5 bits (184), Expect = 1.170e-14 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 1 Query: 25 KVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVQQ 153 +VSYTSWFLDAFNYAL +G+D++NLSIGGPDF D PF DKV + Sbjct: 226 QVSYTSWFLDAFNYALHVGIDVLNLSIGGPDFADSPFTDKVNE 268
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: A0A7S0WN64_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WN64_9CHLO) HSP 1 Score: 74.7 bits (182), Expect = 2.180e-14 Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 25 KVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKV 147 +VS+TSWFLDAFNYAL GV IINLSIGGPDF DQPFVDKV Sbjct: 82 QVSFTSWFLDAFNYALISGVQIINLSIGGPDFLDQPFVDKV 122
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Match: UPI0006C9A9DE (membrane-bound transcription factor site-1 protease isoform X1 n=2 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C9A9DE) HSP 1 Score: 74.7 bits (182), Expect = 2.180e-14 Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 22 KKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKV 147 K+SYTSWFLDAFNYA+ L + I+NLSIGGPDF DQPFVDKV Sbjct: 258 SKISYTSWFLDAFNYAMLLKIKILNLSIGGPDFLDQPFVDKV 299 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig99373.21585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig99373.21585.1 >prot_Ecto-sp13_S_contig99373.21585.1 ID=prot_Ecto-sp13_S_contig99373.21585.1|Name=mRNA_Ecto-sp13_S_contig99373.21585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp MSGCDFVKKVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVQback to top mRNA from alignment at Ecto-sp13_S_contig99373:2..154- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig99373.21585.1 ID=mRNA_Ecto-sp13_S_contig99373.21585.1|Name=mRNA_Ecto-sp13_S_contig99373.21585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=153bp|location=Sequence derived from alignment at Ecto-sp13_S_contig99373:2..154- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig99373:2..154- >mRNA_Ecto-sp13_S_contig99373.21585.1 ID=mRNA_Ecto-sp13_S_contig99373.21585.1|Name=mRNA_Ecto-sp13_S_contig99373.21585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=153bp|location=Sequence derived from alignment at Ecto-sp13_S_contig99373:2..154- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |