mRNA_Ecto-sp13_S_contig9923.21568.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A6H5JEJ5_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ5_9PHAE) HSP 1 Score: 585 bits (1509), Expect = 4.580e-200 Identity = 424/471 (90.02%), Postives = 430/471 (91.30%), Query Frame = 1 Query: 1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGGXXXXXXXXXXXXXXXXXXXXSGRNSGEISDDWRAGYDRSPTPPQIEARRTVGGRSESIDFDEGREGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASKKRTDVKKQSSGPDLLSGDDPFPVTAPSQPQNDFSSFGSFAAAPQAFQGGAPVAPGAWNGGAGVPLQQXXXXXXXXXXXXXXXLAPGSQAGQMVPYGQGAPVPQNXXXXXXXXXXXVQGQTGWGQQTLQGQQGMQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQGVQQQQYVQLQQQMQ 1413 MNI+KLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDR YGTVMR+VWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGY GDMPPRLSGG SGRNSGEI DDWRAGYDRSPTPPQI+ARRTVGGRSESIDFDEGREGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASKKRTD KKQSSGPDLLSGDDPFPV+AP QPQN+F SF SFAAAPQAFQGGAPVAPGAW+GGAGVPLQQXXXXXXXXXXXX LAPG QAGQMVPYGQGAPVPQ XXXXXXXXX VQGQTGWGQQTLQGQQGMQPXXXXXXXXXXXXXXXXXXXXXXXX QQGVQQQQY QLQQQMQ Sbjct: 1 MNIDKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDR--YGTVMRVVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYGGDMPPRLSGGSGGGSRPPHDSSEGAGG---SGRNSGEIIDDWRAGYDRSPTPPQIDARRTVGGRSESIDFDEGREGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASKKRTDGKKQSSGPDLLSGDDPFPVSAPPQPQNEFPSFDSFAAAPQAFQGGAPVAPGAWDGGAGVPLQQXXXXXXXXXXXXQ--LAPGLQAGQMVPYGQGAPVPQXXXXXXXXXXMQVQGQTGWGQQTLQGQQGMQPXXXXXXXXXXXXXXXXXXXXXXXX-----QQGVQQQQYGQLQQQMQ 459
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: D7FUU7_ECTSI (ENTH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU7_ECTSI) HSP 1 Score: 442 bits (1138), Expect = 1.900e-151 Identity = 276/312 (88.46%), Postives = 279/312 (89.42%), Query Frame = 1 Query: 1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGGXXXXXXXXXXXXXXXXXXXXSGRNSGEISDDWRAGYDRSPTPPQIEARRTVGGRSESIDFDEGREGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASKKRTDVKKQSSGPDLLSGDDPFP 936 MNINKLR KAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDR YGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREK+REL+SLMDNPDLIQAQRRNARDLKSQYNGY GDMPPRLSGG XXXXXXXXXXXXXXX SGRNSGEISDDWRAGYDRSPTPPQI+ARR VGGRSESIDFDEGREGYS XXXXXXXXXXXXXXXXXXXXXXXASASKKRTD KKQSSGPDLLSGDDPFP Sbjct: 1 MNINKLRNKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDR--YGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKARELVSLMDNPDLIQAQRRNARDLKSQYNGYGGDMPPRLSGGSGXXXXXXXXXXXXXXX---SGRNSGEISDDWRAGYDRSPTPPQIDARRAVGGRSESIDFDEGREGYSGRLSRFQEQEKREAKLVSGGRRXXXXXXXXXXXXXXXXXXXXXXXASASKKRTDGKKQSSGPDLLSGDDPFP 307
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A835YGI8_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGI8_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.700e-32 Identity = 62/153 (40.52%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 1 MNINKLRTKAEGLVTQLTV-KDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNAR 456 + I+KL+ A + Q+ V K++ E++V D +SN + A ++LN++A D++ D+ YG +M +VW++++SPPR WR + KAL L++HL+K+G ERVV D + +H I L++F Y E D G GVREKS++L+ L+ + D I+ +R+ A+ Sbjct: 8 LTIDKLKNLAADVKNQVAVAKNDTERQVYDVLSNKNWGASSTILNDIARDSYDFDK--YGMIMTIVWQSLESPPREWRKVFKALSLLEHLIKNGTERVVEDARDRMHRITTLSQFNYYEGHADKGSGVREKSKQLIELLKSNDTIREERKRAQ 158
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A7S4DHG0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHG0_HETAK) HSP 1 Score: 126 bits (316), Expect = 4.060e-30 Identity = 60/172 (34.88%), Postives = 109/172 (63.37%), Query Frame = 1 Query: 1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGG 516 + ++ ++ A+ + + K++ EKRV +A+SN + A +L+ E+A+DTF +++ Y + +L+W+ +DSP R WRS+ K L L++ LVKHG+ERV+ D + H H + L F Y + D G GVR+K+R+L+ L+ + + I+ +R+ A+ L+++++G D GG Sbjct: 12 LTLDDVKNIAQDVAINVKPKNDTEKRVHEALSNQNWGASSTLMQEIAKDTFDYEK--YPQITKLIWQALDSPGRAWRSVFKGLSLLEFLVKHGSERVIEDARDHTHRLRLLLNFSYSDGGVDRGQGVRDKARQLVELLSSNETIREERQKAQALRNKFSGISNDSYSYGGGG 181
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A4D9CR71_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR71_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.760e-29 Identity = 65/171 (38.01%), Postives = 106/171 (61.99%), Query Frame = 1 Query: 1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSG 513 +N+ L+ + Q+ + E EKR+ +A+SN + A +L+N++A DT+ +++ Y V++ +W +D P R+WRSI KAL L+DHLVK+GAERVV +V+ H+H+I L +F Y E D G G+REK++ L+ L+ ++ +R AR L+ ++ G PR G Sbjct: 172 INLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEK--YHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRDHLHKIRTLADFNYFEGSLDRGSGIREKAKMLMELVGENGRVREEREKARRLREKFVGIGVTGGPRNGG 340
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A6H5JZR7_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR7_9PHAE) HSP 1 Score: 130 bits (328), Expect = 4.470e-29 Identity = 59/160 (36.88%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNG 480 ++++K++ + + +++ EKRV +A+SN + A +LLN++A DT+ ++ YG V+ L+W + SP R WR + KAL L++HL+K+GAERV+ D + ++H + L++F Y E D G GVREKS++++ L+ + D+I+ +R R L+ +Y G Sbjct: 12 LSLDKVKNMVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEK--YGIVLPLIWTALQSPSREWRKVFKALCLLEHLIKNGAERVIEDARDNLHRVRMLSDFNYYEGPIDKGSGVREKSKQVIELLKDNDMIREEREKCRKLRDKYVG 169
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A7S2LFQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LFQ5_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.570e-27 Identity = 59/172 (34.30%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGG 516 ++++K+R AE ++ Q + + EK+VL+ +S+ + A + LNE+A +T HD Y + +L+W+ +D P WR + KAL L++HL+K+G +R+V D + H H++ L F Y E D G GVREKS++++ ++ + D ++ +R+ AR L+ ++ G G +GG Sbjct: 11 LSLDKIRNAAEDVINQTIPRTDLEKKVLEVLSHKNWGASSTTLNELARET--HDYEKYNVITKLMWEAMDGRPAAWRVVFKALTLLEHLLKNGTDRIVEDARGHGHKLRSLYNFNYYEGTTDRGIGVREKSKQIMEILQDNDRVREERQKARQLREKFGGGLGMAAVGSNGG 180
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A7S2LE80_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LE80_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.540e-26 Identity = 59/172 (34.30%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGG 516 ++++K+R AE ++ Q + + EK+VL+ +S+ + A + LNE+A +T HD Y + +L+W+ +D P WR + KAL L++HL+K+G +R+V D + H H++ L F Y E D G GVREKS++++ ++ + D ++ +R+ AR L+ ++ G G +GG Sbjct: 11 LSLDKIRNAAEDVINQTIPRTDLEKKVLEVLSHKNWGASSTTLNELARET--HDYEKYNVITKLMWEAMDGRPAAWRVVFKALTLLEHLLKNGTDRIVEDARGHGHKLRSLYNFNYYEGTTDRGIGVREKSKQIMEILQDNDRVREERQKARQLREKFGGGLGMAAVGSNGG 180
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A8K1FFS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFS9_PYTOL) HSP 1 Score: 118 bits (296), Expect = 9.460e-25 Identity = 53/139 (38.13%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 64 ECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNG 480 + EK++ +A+SN + A +LLNE+A+ T+ ++ Y +M +W+ +DS R WR++ KAL L+DHL+K+G ERVV + + H+ ++ L++F Y + D G GVREK++++L +++N DLI+ +R +R ++ +Y G Sbjct: 27 DVEKKLEEALSNKNWGASSTLLNEIAQLTYDYES--YNVIMTKIWEAMDSHARQWRTVFKALTLLDHLIKNGTERVVENARDHMFKLRALSDFSYHDGSADKGAGVREKTKQILDMLNNNDLIREEREKSRKMRDKYVG 163
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A024TDZ4_9STRA (ENTH domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TDZ4_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.730e-24 Identity = 59/151 (39.07%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 28 AEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNG 480 A+GLV D EK++ +A+SN + A +LLNE+A+ TF ++ Y VM+ VW+ +D+ R WR++ KAL L+DHL+K+G ERVV + + H+ ++ L++F Y + D G GVREK +++L ++++ D I+ +R A+ L+ +Y G Sbjct: 16 AKGLVKSKMGTDT-EKKLEEALSNKNWGASSTLLNEIAQLTFEYES--YNLVMKKVWEAMDAEGRQWRTVFKALALLDHLIKNGTERVVENARDHMFKLRTLSDFNYYDGSADKGAGVREKVKQILDMLNDNDRIRDEREKAKRLRDKYIG 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9923.21568.1 >prot_Ecto-sp13_S_contig9923.21568.1 ID=prot_Ecto-sp13_S_contig9923.21568.1|Name=mRNA_Ecto-sp13_S_contig9923.21568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=484bp MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTback to top mRNA from alignment at Ecto-sp13_S_contig9923:330..3943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9923.21568.1 ID=mRNA_Ecto-sp13_S_contig9923.21568.1|Name=mRNA_Ecto-sp13_S_contig9923.21568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3614bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9923:330..3943- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9923:330..3943- >mRNA_Ecto-sp13_S_contig9923.21568.1 ID=mRNA_Ecto-sp13_S_contig9923.21568.1|Name=mRNA_Ecto-sp13_S_contig9923.21568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1452bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9923:330..3943- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |