mRNA_Ecto-sp13_S_contig9912.21557.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: D8LFK9_ECTSI (BCNT-C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFK9_ECTSI) HSP 1 Score: 333 bits (855), Expect = 1.940e-108 Identity = 192/223 (86.10%), Postives = 198/223 (88.79%), Query Frame = 1 Query: 1 VSQPEDTMGVATSDRQRSKIDDIWASMNASGADATAPPAGGSRTRLAEGKGKKATKXXXXXXXXXNKVLAGIFGKKAASNIVSGAGKGKRXXXXXXXXXXXXXXXXASSRKVEVTEVKKYAGKDIVVKRKV-AGSAEHVAAAGAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 666
V +PEDTMGVATSDRQRSKIDDIWASMNASGA+ATAPPAGGS T LAEGKGKKATKXXXX N+VLAGIFGKKAAS+IVSGAGKGKR A+SRKVEVTEVKKYAGKDIVVKRKV AGSAEHVAAAGAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEG+EGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA
Sbjct: 31 VEEPEDTMGVATSDRQRSKIDDIWASMNASGAEATAPPAGGSGTGLAEGKGKKATKXXXXANKKANEVLAGIFGKKAASDIVSGAGKGKRRVGAAEGAARKKLL--AASRKVEVTEVKKYAGKDIVVKRKVTAGSAEHVAAAGAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGMEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 251
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: A0A7S2PPL4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPL4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.500e-19 Identity = 63/173 (36.42%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 199 KVLAGIFGKKAASNIVSGAGKG-------KRXXXXXXXXXXXXXXXXASSRKVEVTEVKKYAGKDIVVK----------RKVAGSAEHVAAAGAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 666
K+LA IFGK AA N++S A G R ++ VTEVK++AG+D+ V+ G+ + A K GGLD VL+ L GP+ ISTVTK+S DW+ +K G++ ++++ +D YL K++FLQR D+R+FE E R+ KR A
Sbjct: 25 KLLANIFGKNAAENMISSASSGLKKKKRKTRENVVAISDEKLNMLMNGVKQQKRVTEVKRFAGQDVRVEVAPTSVNGTVSSTEGATDTAAPVQHKTGGLDKVLSDLSGPQKISTVTKTSSDWDQFKDKHGLDDELQKKAQDKDAYLVKKEFLQRVDLRRFEHEKADREMKRAA 197
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: A0A6G0WCK9_9STRA (BCNT-C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCK9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.470e-19 Identity = 64/155 (41.29%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 223 KKAASNIVSGAGKGKRXXXXXXXXXXXXXXXXASSRKV-------EVTEVKKYAGKDIVVKRKVAGSAEHVAAAGAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 666
KK + ++SG K+ +++RK +VTEV K+AG++ V +KV+ S + GLD+ LAAL+ PK IST+ KSSMDWE++K EGI +++Q TKDG YL KQDFL R DVRKFE E R R A
Sbjct: 83 KKLLNKLLSGGSSKKKKQKVHEFKIPVLGCSTSATRKTALKAEKDQVTEVLKFAGQEYSVTKKVSSS----------ESGLDSALAALNQPKKISTIEKSSMDWESFKDKEGIADELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 225
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: A0A4D9CWA7_9STRA (BCNT-C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA7_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.020e-18 Identity = 86/200 (43.00%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 202 VLAGIFGKKAASNIVSGAGKGKRXXXXXXXXXXXXXXXX------ASSRKVEVTEVKKYAGKDIVVKRKVAGSA---------------------------EHVAAAG--------------AKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 660
+LAGIFG AS++V+ AG G R XXXXXXXXXXX A + K VTE KK+AG+++ VKR V G + V G KK GLD VL + GP+ ISTV KSS DWET+KA G+E ++ QATKDG YL K+DFL+RCD R FE E +AR + R
Sbjct: 109 LLAGIFGNNTASSMVAKAGGGGRGEXXXXXXXXXXXTAARRALLKAHASKRIVTETKKFAGQEVQVKRVVVGEGAEGEGGREXXXXXXXXXXTLSKRQTALDPVVGPGPGMAEGKGGARGSEGKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 306
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: I2CQ62_NANGC (Craniofacial development protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ62_NANGC) HSP 1 Score: 90.9 bits (224), Expect = 6.350e-18 Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 424 GAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 660
G KK GLD VL + GP+ ISTV KSS DWET+KA G+E ++ QATKDG YL K+DFL+RCD R FE E +AR + R
Sbjct: 40 GKKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 116
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: A0A485K980_9STRA (Aste57867_1012 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K980_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 7.900e-18 Identity = 74/207 (35.75%), Postives = 100/207 (48.31%), Query Frame = 1 Query: 55 KIDDIWASMNASGADATAPPAGGSRTRLAEGKGKKATKXXXXXXXXXNKVLAGIFGKKAASNIVSGAGKGKRXXXXXXXXXXXXXXXXASSRKVE---VTEVKKYAGKDIVVKRKVAGSAEHVAAAGAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 666
K+DD+W+ +NA T +++ K+ K NK+L+G+ GKK + A+ K+ VTEV KYAG++ V +K A K LD+ LAAL+ PK IST+ KSS+DW+T+K EGI +++Q TKDG YL KQDFL R DVRKFE E R R A
Sbjct: 63 KVDDMWSDLNAD-------------TAVSQKSTDKSQKLL-------NKLLSGVAGKKKKQMV---------HEFKIPVLGCSTTTKRATELKMPDETVTEVLKYAGQEYSVTKK---------ATAPKASALDSALAALNQPKKISTIEKSSVDWDTFKDKEGISDELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 229
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: A0A3R7H270_9STRA (BCNT-C domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H270_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.690e-17 Identity = 56/116 (48.28%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 319 ASSRKVEVTEVKKYAGKDIVVKRKVAGSAEHVAAAGAKKGG--LDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 660
A + K +V V K+AGK+ V + AGSA A AK G LD VLA+LD PK +ST+ KSS+DW+ +K AEGI+ +++Q TKDG Y+ KQ+FLQR D+++FE E R +R
Sbjct: 111 AEASKQKVDRVVKFAGKEYSVSTR-AGSAGEAAGKPAKGGAKALDKVLASLDEPKKVSTMEKSSLDWDKFKEAEGIDDELKQYTKDG--YIEKQEFLQRLDLKRFEIEKAERDKQR 223
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: A0A7S2S6Z9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Z9_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.680e-17 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 328 RKVEVTEVKKYAGKDIVVKRKV--AGSAEHVAAAGAKKG---GLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 666
++V VTE ++AG+ + V R+V AG + A+ A G LD L L GP+ ISTV KSS DW+ YK G + D+EQA K GYL++QDFL+RCDVR+FE E + RQ KR A
Sbjct: 168 KRVTVTEKVRFAGQTVEVSRQVLSAGDSADQDASKAPAGPNSSLDKALEVLSGPRKISTVAKSSADWDRYKEESGTQDDLEQAAK--AGYLSRQDFLERCDVRQFEKERDLRQDKRAA 283
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: A0A397DYY6_9STRA (BCNT-C domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DYY6_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 6.890e-17 Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = 1 Query: 319 ASSRKVEVTEVKKYAGKDIVVKRKVAGSAEHVAAAGAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 660
A++ V T+V KYAG++ V +K A S GA++ LD LA+L+ PK +ST+ KSS+DW+++K GI +++Q TKDG YL KQDFL R D RKFE E R +R
Sbjct: 56 AAATPVVSTQVLKYAGQEYSVTKKAAAS-------GARESALDAALASLNQPKKVSTIEKSSLDWDSFKDEAGIVDELDQYTKDG--YLEKQDFLHRVDARKFELEKAVRDKQR 160
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Match: A0A8K1C5W9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5W9_PYTOL) HSP 1 Score: 90.1 bits (222), Expect = 6.970e-17 Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 337 EVTEVKKYAGKDIVVKRKVAGSAEHVAAAGAKKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGIEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 660
EV EV K+AG++ V ++VA A+ K LD+VLA+ +GPK I+T+ K+S+DW+ +K EGIE +++QATKDG Y+ KQ+FLQR D+++FE E R+ +R
Sbjct: 112 EVKEVVKFAGQEYSVSKRVAPVAK-------SKQKLDDVLASFEGPKKINTIEKTSIDWDKFKEQEGIEDELKQATKDG--YIEKQEFLQRMDLKRFEIEKAERERQR 210 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9912.21557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9912.21557.1 >prot_Ecto-sp13_S_contig9912.21557.1 ID=prot_Ecto-sp13_S_contig9912.21557.1|Name=mRNA_Ecto-sp13_S_contig9912.21557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp MGVATSDRQRSKIDDIWASMNASGADATAPPAGGSRTRLAEGKGKKATKKback to top mRNA from alignment at Ecto-sp13_S_contig9912:2..3316+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9912.21557.1 ID=mRNA_Ecto-sp13_S_contig9912.21557.1|Name=mRNA_Ecto-sp13_S_contig9912.21557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9912:2..3316+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9912:2..3316+ >mRNA_Ecto-sp13_S_contig9912.21557.1 ID=mRNA_Ecto-sp13_S_contig9912.21557.1|Name=mRNA_Ecto-sp13_S_contig9912.21557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=648bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9912:2..3316+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |