Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 1 |
Model size | 678 |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Cds size | 429 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681464251.7239492-UTR-Ecto-sp13_S_contig9906:4309..4556 | 1681464251.7239492-UTR-Ecto-sp13_S_contig9906:4309..4556 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig9906 4310..4556 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681464251.7348914-CDS-Ecto-sp13_S_contig9906:4556..4985 | 1681464251.7348914-CDS-Ecto-sp13_S_contig9906:4556..4985 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9906 4557..4985 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9906.21551.1 >prot_Ecto-sp13_S_contig9906.21551.1 ID=prot_Ecto-sp13_S_contig9906.21551.1|Name=mRNA_Ecto-sp13_S_contig9906.21551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=143bp
MRGVGGSRCVHRQSCWFNFILTERTTDLTFLESGLNQTIFEMSHEDFLSG IIGEGPLITWWDERQLINRLDHYNNAEDCICLEEQEIIWAAIVHYEACFV ADWMVFRGYIATPEWHDDCDSVFLCVPHDASTWDQWLQSNLMM back to topmRNA from alignment at Ecto-sp13_S_contig9906:4310..4985+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig9906.21551.1 ID=mRNA_Ecto-sp13_S_contig9906.21551.1|Name=mRNA_Ecto-sp13_S_contig9906.21551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=676bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9906:4310..4985+ (Ectocarpus species13 EcNAP12_S_4_19m) CTTCGTACATTTCTATTCGAAGTTGAGACGCGACGCGTATTATAGGAGGG
AGAGAGATTCACCAACTGTCTTTGTCGCAGACAAGAGTTGTTTAGGGTGC
TACCCTTCTGTATCGAGCCAGGCATGCTAGAGACTCGGTTGGCTTCTCGT
CCCCCGTACCGAAATAAAAAAAAGCCGTTGAGCGGAACAAAGCAGAAAGT
TGTTTGTTCAGAATGCAACGGGGCCACGCTGACGAGACCGATTTTATATG
AGGGGTGTAGGGGGTTCAAGGTGTGTTCACAGACAAAGTTGTTGGTTCAA
TTTTATCCTCACAGAGCGCACTACCGACCTCACTTTCCTCGAATCTGGGC
TAAACCAAACCATTTTTGAGATGTCTCACGAAGACTTCCTCTCGGGTATT
ATCGGTGAAGGACCATTGATCACCTGGTGGGATGAGCGCCAGCTTATAAA
TCGTTTGGACCACTATAATAATGCTGAAGACTGCATATGCCTCGAAGAGC
AGGAGATTATCTGGGCTGCGATAGTACACTACGAAGCGTGTTTTGTTGCC
GACTGGATGGTTTTCAGGGGATATATTGCAACACCGGAGTGGCACGACGA
TTGTGATAGTGTTTTTTTATGTGTCCCCCATGACGCTTCCACATGGGACC
AGTGGTTGCAATCCAATTTGATGATG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig9906:4310..4985+ >mRNA_Ecto-sp13_S_contig9906.21551.1 ID=mRNA_Ecto-sp13_S_contig9906.21551.1|Name=mRNA_Ecto-sp13_S_contig9906.21551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=429bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9906:4310..4985+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGAGGGGTGTAGGGGGTTCAAGGTGTGTTCACAGACAAAGTTGTTGGTT CAATTTTATCCTCACAGAGCGCACTACCGACCTCACTTTCCTCGAATCTG GGCTAAACCAAACCATTTTTGAGATGTCTCACGAAGACTTCCTCTCGGGT ATTATCGGTGAAGGACCATTGATCACCTGGTGGGATGAGCGCCAGCTTAT AAATCGTTTGGACCACTATAATAATGCTGAAGACTGCATATGCCTCGAAG AGCAGGAGATTATCTGGGCTGCGATAGTACACTACGAAGCGTGTTTTGTT GCCGACTGGATGGTTTTCAGGGGATATATTGCAACACCGGAGTGGCACGA CGATTGTGATAGTGTTTTTTTATGTGTCCCCCATGACGCTTCCACATGGG ACCAGTGGTTGCAATCCAATTTGATGATG back to top
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