Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 758 |
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Cds size | 423 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464250.8908775-UTR-Ecto-sp13_S_contig99:31421..31433 | 1681464250.8908775-UTR-Ecto-sp13_S_contig99:31421..31433 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig99 31422..31433 + |
| 1681464250.9134328-UTR-Ecto-sp13_S_contig99:31856..32179 | 1681464250.9134328-UTR-Ecto-sp13_S_contig99:31856..32179 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig99 31857..32179 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464250.9026496-CDS-Ecto-sp13_S_contig99:31433..31856 | 1681464250.9026496-CDS-Ecto-sp13_S_contig99:31433..31856 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig99 31434..31856 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig99.21542.1 >prot_Ecto-sp13_S_contig99.21542.1 ID=prot_Ecto-sp13_S_contig99.21542.1|Name=mRNA_Ecto-sp13_S_contig99.21542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp
MKKKEAFLGWLFCRFFLVVRGVISRSNCSNQTPHKPKLIHPKSGSTEIQS
NAKQYSLVHITEDGWAPVSPRTPKNRVFRGRRPPPVSTVAHHFLTMITGW
CTPLNVLLELIIADNDGGRPTPRAVFVSCMTCAASLWGRQ* back to topmRNA from alignment at Ecto-sp13_S_contig99:31422..32179+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig99.21542.1 ID=mRNA_Ecto-sp13_S_contig99.21542.1|Name=mRNA_Ecto-sp13_S_contig99.21542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=758bp|location=Sequence derived from alignment at Ecto-sp13_S_contig99:31422..32179+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCCACCGAGTCATGAAAAAAAAAGAAGCATTTTTGGGTTGGTTGTTCTG
TCGTTTTTTTCTGGTCGTTAGAGGCGTAATCTCGAGGTCTAACTGTTCAA
ACCAAACCCCGCATAAACCAAAACTGATTCATCCGAAATCCGGTTCCACC
GAAATCCAGTCCAACGCAAAACAGTATTCTCTTGTGCATATAACAGAAGA
CGGCTGGGCTCCTGTGTCGCCAAGAACGCCGAAAAATAGGGTGTTTCGTG
GACGGCGTCCACCTCCAGTATCAACCGTAGCACACCATTTCCTCACAATG
ATAACTGGTTGGTGCACCCCACTGAATGTGTTATTGGAACTGATCATTGC
CGATAATGATGGAGGTAGGCCTACACCGAGAGCTGTTTTCGTGTCGTGTA
TGACGTGTGCAGCCTCTCTGTGGGGCCGCCAATGATTGGGTGGCCGGAAA
CAGGCCGCTCGAAAAGAAGGCTGAGCGCTACATCATACACTGGGGAGGGG
GGCATGGTCACGTAGCCCCGTCGACGCAGCGGACGGCGCGGAATCTGGCG
TCGCCGTAACGATTACCAGGACAACAGTCTTCCCCAAAATGTGTGGAAAA
ATAACTTGCAACAGGTTGGAAAGTCCGTACAACACTATATTGTACCCACC
CAAATCGGCGATATCTCACAAGAACTTACCTCCAGCCAACAGAACAAAAC
TTTCGGCGTCTCTTGAACTTCATGATGCTGGTTGTTCCAATAACTTCAGC
CGTCACAG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig99:31422..32179+ >mRNA_Ecto-sp13_S_contig99.21542.1 ID=mRNA_Ecto-sp13_S_contig99.21542.1|Name=mRNA_Ecto-sp13_S_contig99.21542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=423bp|location=Sequence derived from alignment at Ecto-sp13_S_contig99:31422..32179+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAAAAAAAAGAAGCATTTTTGGGTTGGTTGTTCTGTCGTTTTTTTCT
GGTCGTTAGAGGCGTAATCTCGAGGTCTAACTGTTCAAACCAAACCCCGC
ATAAACCAAAACTGATTCATCCGAAATCCGGTTCCACCGAAATCCAGTCC
AACGCAAAACAGTATTCTCTTGTGCATATAACAGAAGACGGCTGGGCTCC
TGTGTCGCCAAGAACGCCGAAAAATAGGGTGTTTCGTGGACGGCGTCCAC
CTCCAGTATCAACCGTAGCACACCATTTCCTCACAATGATAACTGGTTGG
TGCACCCCACTGAATGTGTTATTGGAACTGATCATTGCCGATAATGATGG
AGGTAGGCCTACACCGAGAGCTGTTTTCGTGTCGTGTATGACGTGTGCAG
CCTCTCTGTGGGGCCGCCAATGA back to top
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