Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 468 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 312 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464250.3695345-UTR-Ecto-sp13_S_contig98925:1..7 | 1681464250.3695345-UTR-Ecto-sp13_S_contig98925:1..7 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig98925 2..7 + |
| 1681464250.3949268-UTR-Ecto-sp13_S_contig98925:319..469 | 1681464250.3949268-UTR-Ecto-sp13_S_contig98925:319..469 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig98925 320..469 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464250.381086-CDS-Ecto-sp13_S_contig98925:7..319 | 1681464250.381086-CDS-Ecto-sp13_S_contig98925:7..319 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98925 8..319 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig98925.21533.1 >prot_Ecto-sp13_S_contig98925.21533.1 ID=prot_Ecto-sp13_S_contig98925.21533.1|Name=mRNA_Ecto-sp13_S_contig98925.21533.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
MGGVALGILLSGSSSFPRPLRPRSRLSNRAISLLWHTYALQAEPPTRCPH
SSTGHRRSRSLALASASSAVFKKMTRRCLHFSLSLYPEKEGGQLCCSNGV
KHS* back to topmRNA from alignment at Ecto-sp13_S_contig98925:2..469+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig98925.21533.1 ID=mRNA_Ecto-sp13_S_contig98925.21533.1|Name=mRNA_Ecto-sp13_S_contig98925.21533.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=468bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98925:2..469+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCTTGATGGGTGGTGTGGCTCTCGGCATCCTTTTGTCGGGCAGCAGCTC
TTTCCCGAGACCCTTGAGGCCGAGATCGAGACTGAGCAACCGAGCAATAT
CTCTCCTCTGGCACACGTATGCGCTTCAAGCGGAGCCGCCAACGCGGTGT
CCTCACTCATCGACGGGGCACCGCCGCTCTCGTTCGCTCGCTTTAGCGTC
GGCAAGTAGCGCCGTCTTCAAGAAAATGACACGCAGATGTTTGCATTTTT
CGCTCAGTTTGTATCCGGAAAAAGAAGGGGGGCAACTTTGCTGCAGCAAC
GGAGTGAAGCACTCTTGACGATTGAACGTTGTCCCCGACTGTTGTTGCCT
TATTTTGAGCCTGTGGCCCCCTGGTAGCCGCACACTCGTATTTCCTCCGC
TCGATGGCGCCCTCCTGTCTTTCAGCCAACCAACTGCTGTAGCGCGTCAA
TTTGGCCCATTCGCAGCT back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig98925:2..469+ >mRNA_Ecto-sp13_S_contig98925.21533.1 ID=mRNA_Ecto-sp13_S_contig98925.21533.1|Name=mRNA_Ecto-sp13_S_contig98925.21533.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=312bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98925:2..469+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGTGGTGTGGCTCTCGGCATCCTTTTGTCGGGCAGCAGCTCTTTCCC
GAGACCCTTGAGGCCGAGATCGAGACTGAGCAACCGAGCAATATCTCTCC
TCTGGCACACGTATGCGCTTCAAGCGGAGCCGCCAACGCGGTGTCCTCAC
TCATCGACGGGGCACCGCCGCTCTCGTTCGCTCGCTTTAGCGTCGGCAAG
TAGCGCCGTCTTCAAGAAAATGACACGCAGATGTTTGCATTTTTCGCTCA
GTTTGTATCCGGAAAAAGAAGGGGGGCAACTTTGCTGCAGCAACGGAGTG
AAGCACTCTTGA back to top
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