mRNA_Ecto-sp13_S_contig9869.21513.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: D7G364_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G364_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 7.080e-184 Identity = 261/286 (91.26%), Postives = 270/286 (94.41%), Query Frame = 1 Query: 1 MQWVGTSGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKRPSGEEEHDWRHEESEASMRLLEEGDRDASCIGRRLSSGLE 858 MQ VG+SGEKMPQ LFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALIT GIVIFNLA+ S E+DK+NS YGLCLLV SL+FDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQW+KGSLFCADNPLV GYVVAFSLAAACGQFFIYYTI+TFNPLACATITTTRKFFTIVFSVITFGH+ISLKQWGGVAMVFV IGFYMHGKHKRPS EEEHD EESEASMRLLEEGDRDASCIG+RLSS E Sbjct: 63 MQCVGSSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITTGIVIFNLAERSNNEQDKRNSMYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWMKGSLFCADNPLVTGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDCCQEESEASMRLLEEGDRDASCIGQRLSSSPE 348
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A6H5JQ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ56_9PHAE) HSP 1 Score: 425 bits (1093), Expect = 6.490e-149 Identity = 216/237 (91.14%), Postives = 221/237 (93.25%), Query Frame = 1 Query: 148 MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKRPSGEEEHDWRHEESEASMRLLEEGDRDASCIGRRLSSGLE 858 MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGL LLVTSL+FDGVMTSSQERLK ICKPT YEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSL AACGQFFIYYTI+TF+PLACATITTTRKFFTIVFSVITFGH+ISLKQWGGVAMVFV IGFYMHGKHKRP E HD RH+ESEASMRLLEEGD DAS I RR S LE Sbjct: 1 MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLSLLVTSLIFDGVMTSSQERLKTICKPTAYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLTAACGQFFIYYTITTFSPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPRDEGGHDLRHDESEASMRLLEEGDCDASFIDRRPPSSLE 237
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: D7G358_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G358_ECTSI) HSP 1 Score: 352 bits (904), Expect = 1.090e-118 Identity = 178/242 (73.55%), Postives = 198/242 (81.82%), Query Frame = 1 Query: 13 GTSGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738 G SG+KMP HLFG G AYIGAM+ SIEAL+YVNFPTKELGKSCKMIPVMLFGVLFAKKQYS++EYLCVALIT+GIV FNL+ +EDK+NSTYGL LL SL+ DGV S+QERLKA CKPTV+EMMF+ NAWAL LSAAA+ SGQ V+G FC+ NP VM YV+ FSLAAA GQ FIYYTIS FNPL C TITTTRKFFTIV SVI FGH I KQWGGVAMVF IG+ M GK++R Sbjct: 85 GRSGDKMPHHLFGTAGFAYIGAMVCSIEALKYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSLQEYLCVALITVGIVTFNLSGKPHNKEDKENSTYGLGLLAFSLILDGVTGSAQERLKAACKPTVHEMMFFMNAWALAILSAAAYLSGQAVEGYAFCSANPSVMSYVLGFSLAAAFGQNFIYYTISNFNPLVCTTITTTRKFFTIVCSVIIFGHAIGPKQWGGVAMVFTGIGYEMRGKYQR 326
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A835ZCP5_9STRA (UAA transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP5_9STRA) HSP 1 Score: 271 bits (693), Expect = 1.930e-86 Identity = 142/240 (59.17%), Postives = 175/240 (72.92%), Query Frame = 1 Query: 19 SGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738 SGE +P LF + G+ YI AMI S+E+L Y+NFPTKELGKSCKMIPVMLFGV+FA K+YSVR+Y+ VALIT GIV FNLA K + ++NSTYGL LL SLV DGV S+Q+ +K K TV+EMMF+ NAWAL L+ A +GQ G FC +NP V+ + F+L AA GQ FIY+TIS F+ L C TITTTRKFFTI+FSV+ FGH +S KQW GVAMVF ++ M KH++ Sbjct: 100 SGEAIPHKLFSMAGAGYISAMICSLESLNYINFPTKELGKSCKMIPVMLFGVVFAGKRYSVRDYVGVALITAGIVTFNLA--GKHKSGRENSTYGLALLFMSLVLDGVTGSTQDNIKRAHKHTVHEMMFWMNAWALVVLTPMAVLTGQAAGGYAFCQENPAVLRDLFGFALTAALGQNFIYFTISHFSSLVCTTITTTRKFFTILFSVLFFGHPMSPKQWAGVAMVFTALIDNMWSKHQK 337
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A2D4BZF8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF8_PYTIN) HSP 1 Score: 252 bits (644), Expect = 2.760e-79 Identity = 120/236 (50.85%), Postives = 165/236 (69.92%), Query Frame = 1 Query: 31 MPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738 MP F +T SAY+GAM+ S EAL++V++PT+ LGKSCKMIPVML GVL +K+Y++R+Y+CV LIT GI +F L K S ++NSTYGL LL TSL DG+ QE + +PTV++ MFYTN WA+ + A A +GQ V G FC +NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH+++ W GVA+VF +G+ + K+++ Sbjct: 92 MPLKPFAVTSSAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLLITTGIAVFQLGKASSKHASQENSTYGLLLLFTSLTLDGISGPKQEEISQTLRPTVHQQMFYTNLWAVLYTGAGALVTGQAVSGFQFCVENPAILNSVFYFSICSAXGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHSLTAMSWIGVAIVFTGLGWELSSKYQK 327
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A5D6XRA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA2_9STRA) HSP 1 Score: 248 bits (633), Expect = 7.250e-78 Identity = 121/237 (51.05%), Postives = 161/237 (67.93%), Query Frame = 1 Query: 28 KMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738 +MP F T AY+GAM+ S EAL++V++PT+ LGKSCKMIPVML GVL +K+YS REY CV LIT GI +F L K S ++NS+YGL LL SL DGV QE + +P+V++ MFYTN WA+ + A A A+GQ + G FCA+NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH +S W GVA+VF +G+ + K+ + Sbjct: 73 RMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLLRRKKYSAREYFCVLLITAGIAVFQLGKASAKHAAQENSSYGLVLLFLSLTLDGVSGPKQEEIAQTLRPSVHQQMFYTNLWAVIYTGAGALATGQGLAGLAFCAENPAILSSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSATSWAGVAVVFAGLGWELVSKYHK 309
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A6V2XTI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XTI4_HETAK) HSP 1 Score: 249 bits (636), Expect = 1.800e-77 Identity = 122/246 (49.59%), Postives = 170/246 (69.11%), Query Frame = 1 Query: 1 MQWVGTSGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738 M +G SG+KMPQ++F G+ YIGAM+ S E+L++VN+PT+ LGKSCKMIPVMLFGVLFA K+YS++EYLCV LIT GI +F ++ G K+NS +GL LL SL DG+ S+Q +LK KPTV+E+MF+TN WA+ L+ +GQ G + NP + + FS +A GQ FI++T+S F+PL C TITTTRKFFT++FSV FGH ++ W V++VF + ++GK+++ Sbjct: 110 MLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMS-GKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGLTGEVYGKYQK 354
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: K3X0M7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0M7_GLOUD) HSP 1 Score: 246 bits (627), Expect = 7.220e-77 Identity = 118/237 (49.79%), Postives = 161/237 (67.93%), Query Frame = 1 Query: 28 KMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738 MP F T AY+GAM+ S EAL++V++PT+ LGKSCKMIPVM+ GVL +K+Y++REY+CV LIT+GI +F L K S ++NSTYGL LL SL DGV QE + +P+V++ MFYTN WA+ + A A +GQ G FC +NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH +S W GV +VFV +G+ + K+++ Sbjct: 80 SMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMIMGVLIRRKKYTMREYICVLLITVGIAVFQLGKASSKHAAQENSTYGLILLFLSLTLDGVSGPKQEEISQTLRPSVHQQMFYTNLWAVIYTGAGALLTGQAFSGFFFCVENPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHQLSAMSWIGVTIVFVGLGWELTSKYQK 316
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: H3GWN5_PHYRM (Uncharacterized protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=H3GWN5_PHYRM) HSP 1 Score: 243 bits (621), Expect = 5.980e-76 Identity = 115/237 (48.52%), Postives = 164/237 (69.20%), Query Frame = 1 Query: 28 KMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738 +MP F +T AY+GAM+ S EAL++V+FPT+ LGKSCKMIPVML GVL +K+Y++R+Y+CV +IT GI +F L K S +++NSTYGL LL SL DG+ QE + +P+V++ M TN WA+ + A +GQ ++G FC +NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH +SL W GVA+VF+ +G+ + K+++ Sbjct: 82 RMPLAPFAMTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVVVITTGIAVFQLGKASAKHAERENSTYGLLLLFASLTLDGISGPKQEEIAHQLRPSVHQQMLNTNIWAVVYTGVGALVTGQALEGFFFCIENPSILNSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWLGVAVVFIGLGWELSSKYQK 318
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A0P1AG43_PLAHL (Solute carrier family 35 member b1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AG43_PLAHL) HSP 1 Score: 243 bits (619), Expect = 1.200e-75 Identity = 116/237 (48.95%), Postives = 164/237 (69.20%), Query Frame = 1 Query: 28 KMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738 +MP F LT AY+GAM+ S EAL++V+FPT+ LGKSCKMIPVML GVL +K+Y++R+Y+CV +IT GI +F L K S +++NSTYGL LL SL DG+ QE + +P+V++ MF TN WA+ + A +GQ ++G FC +NP ++ V FS+ +A GQ FIY+TI F+ L C TITTTRKFFTI+FSV+ +GH +SL W GVA+V + +G+ + K+++ Sbjct: 82 RMPLAPFALTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLVITSGIAVFQLGKSSAKHAERENSTYGLLLLFLSLTLDGISGPKQEEIAHQLRPSVHQQMFNTNIWAVVYTGIGALVTGQALEGLYFCINNPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWFGVAIVNIGLGWELSSKYRK 318 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9869.21513.1 >prot_Ecto-sp13_S_contig9869.21513.1 ID=prot_Ecto-sp13_S_contig9869.21513.1|Name=mRNA_Ecto-sp13_S_contig9869.21513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp MQWVGTSGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMback to top mRNA from alignment at Ecto-sp13_S_contig9869:1881..5727+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9869.21513.1 ID=mRNA_Ecto-sp13_S_contig9869.21513.1|Name=mRNA_Ecto-sp13_S_contig9869.21513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3847bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9869:1881..5727+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9869:1881..5727+ >mRNA_Ecto-sp13_S_contig9869.21513.1 ID=mRNA_Ecto-sp13_S_contig9869.21513.1|Name=mRNA_Ecto-sp13_S_contig9869.21513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9869:1881..5727+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |