mRNA_Ecto-sp13_S_contig9867.21511.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9867.21511.1
Unique NamemRNA_Ecto-sp13_S_contig9867.21511.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: A0A6H5KX71_9PHAE (Dolichyl-phosphate beta-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX71_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.700e-37
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 1 
Query:    1 KSNKEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            KSNKEAFPVCGDPPSKTLSVIVPAHNEE RLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT
Sbjct:   59 KSNKEAFPVCGDPPSKTLSVIVPAHNEEDRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 126
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BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: UPI001CFB76C8 (dolichyl-phosphate beta-glucosyltransferase n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB76C8)

HSP 1 Score: 78.2 bits (191), Expect = 1.470e-15
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 1 
Query:   10 KEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            KE FP   DPPSK LSV+VP++NEE RLP M+ +   YL  R+K   +SFTYEVIVVDDGSTD T
Sbjct:   53 KELFPSVHDPPSKELSVVVPSYNEESRLPVMMDEALEYLEKRQK-QHNSFTYEVIVVDDGSTDQT 116
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BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: A0A7C9ARJ4_OPUST (Glyco_trans_2-like domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ARJ4_OPUST)

HSP 1 Score: 73.6 bits (179), Expect = 1.890e-15
Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 1 
Query:   22 PVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            P   DP  K +S+I+PA+NEE RLPG L +T  YL  RRK  D SFTYEV++VDDGS DGT
Sbjct:   11 PSIFDPAEKYISLIIPAYNEEHRLPGALDETINYLQKRRK-KDDSFTYEVVIVDDGSVDGT 70
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BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: A0A6J2MXU7_9CHIR (Dolichyl-phosphate beta-glucosyltransferase n=7 Tax=Phyllostomidae TaxID=9415 RepID=A0A6J2MXU7_9CHIR)

HSP 1 Score: 77.8 bits (190), Expect = 2.090e-15
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 1 
Query:    1 KSNKEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            +  KEA P  GDPPSK LSV+VP++NEE RLP M+ +   YL  R++  D +FTYEVIVVDDGS D T
Sbjct:   54 RGRKEALPSLGDPPSKRLSVVVPSYNEEKRLPVMMDEALGYLEERQR-RDPTFTYEVIVVDDGSKDQT 120
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BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: UPI00187C8F70 (dolichyl-phosphate beta-glucosyltransferase isoform X2 n=1 Tax=Artibeus jamaicensis TaxID=9417 RepID=UPI00187C8F70)

HSP 1 Score: 77.8 bits (190), Expect = 2.090e-15
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1 
Query:    1 KSNKEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            K +KEA P  GDPP+K LSV+VP++NEE RLP M+ +   YL  R++  D +FTYEVIVVDDGS D T
Sbjct:   54 KGHKEALPGIGDPPTKQLSVVVPSYNEEKRLPVMMDEALGYLEERQR-RDPTFTYEVIVVDDGSKDQT 120
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BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: A0A813UXB3_ADIRI (Dolichyl-phosphate beta-glucosyltransferase n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A813UXB3_ADIRI)

HSP 1 Score: 77.4 bits (189), Expect = 2.630e-15
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:    7 NKEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            ++  FP   DPPSK LSVI+PA+ E  RLP M+KDT +YL  R+   DSSFTYE+I+VDDGS D T
Sbjct:   48 SRNKFPSLNDPPSKYLSVIIPAYKEVDRLPSMIKDTMSYLENRQA-KDSSFTYELIIVDDGSPDKT 112
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BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: A0A0D6R0U1_ARACU (Glyco_trans_2-like domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R0U1_ARACU)

HSP 1 Score: 75.1 bits (183), Expect = 2.720e-15
Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 1 
Query:   10 KEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            K   P   DPP K +S+I+PA+NEE RLPG + +T +YL  +R  AD SF+YEVI+VDDGSTDGT
Sbjct:   58 KVPCPSIFDPPEKYMSLIIPAYNEESRLPGTVDETLSYLQ-QRAFADKSFSYEVIIVDDGSTDGT 121
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BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: UPI0003F0BB73 (dolichyl-phosphate beta-glucosyltransferase isoform X1 n=2 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0BB73)

HSP 1 Score: 77.4 bits (189), Expect = 2.810e-15
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 1 
Query:    1 KSNKEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            K  KE  P   DPP+K LSV+VP++NEE RLP M+ +  +YL  R+K  DS+FTYEVIVVDDGS D T
Sbjct:   50 KGQKETLPSIWDPPTKQLSVVVPSYNEEKRLPVMMDEALSYLEKRQK-QDSTFTYEVIVVDDGSQDKT 116
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: UPI00187C0CF5 (dolichyl-phosphate beta-glucosyltransferase isoform X1 n=1 Tax=Artibeus jamaicensis TaxID=9417 RepID=UPI00187C0CF5)

HSP 1 Score: 77.8 bits (190), Expect = 2.830e-15
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1 
Query:    1 KSNKEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            K +KEA P  GDPP+K LSV+VP++NEE RLP M+ +   YL  R++  D +FTYEVIVVDDGS D T
Sbjct:   54 KGHKEALPGIGDPPTKQLSVVVPSYNEEKRLPVMMDEALGYLEERQR-RDPTFTYEVIVVDDGSKDQT 120
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Match: A0A480WTA7_PIG (Dolichyl-phosphate beta-glucosyltransferase isoform 1 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A480WTA7_PIG)

HSP 1 Score: 75.5 bits (184), Expect = 4.500e-15
Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 1 
Query:   10 KEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTADSSFTYEVIVVDDGSTDGT 204
            KEA P   DPP+K LSV+VP++NEE RLP ML +   YL  R+K  D +FTYEVIVVDDGS D T
Sbjct:   52 KEALPSIRDPPTKQLSVVVPSYNEENRLPVMLDEALGYLEERQK-RDPTFTYEVIVVDDGSKDQT 115
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9867.21511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX71_9PHAE1.700e-3798.53Dolichyl-phosphate beta-glucosyltransferase n=2 Ta... [more]
UPI001CFB76C81.470e-1563.08dolichyl-phosphate beta-glucosyltransferase n=1 Ta... [more]
A0A7C9ARJ4_OPUST1.890e-1560.66Glyco_trans_2-like domain-containing protein (Frag... [more]
A0A6J2MXU7_9CHIR2.090e-1558.82Dolichyl-phosphate beta-glucosyltransferase n=7 Ta... [more]
UPI00187C8F702.090e-1558.82dolichyl-phosphate beta-glucosyltransferase isofor... [more]
A0A813UXB3_ADIRI2.630e-1559.09Dolichyl-phosphate beta-glucosyltransferase n=2 Ta... [more]
A0A0D6R0U1_ARACU2.720e-1558.46Glyco_trans_2-like domain-containing protein n=1 T... [more]
UPI0003F0BB732.810e-1558.82dolichyl-phosphate beta-glucosyltransferase isofor... [more]
UPI00187C0CF52.830e-1558.82dolichyl-phosphate beta-glucosyltransferase isofor... [more]
A0A480WTA7_PIG4.500e-1561.54Dolichyl-phosphate beta-glucosyltransferase isofor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9867contigEcto-sp13_S_contig9867:5421..6116 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score136.0
Seed ortholog evalue6.7e-30
Seed eggNOG ortholog2880.D8LR86
Preferred nameALG5
Model size204
KEGG rclassRC00005,RC02795
KEGG koko:K00729,ko:K03027
KEGG ReactionR00435,R00441,R00442,R00443,R01005
KEGG Pathwayko00230,ko00240,ko00510,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map00510,map01100,map03020,map04623,map05169
KEGG ModuleM00055,M00181,M00182
Hectar predicted targeting categoryother localisation
GOsGO:0001667,GO:0001703,GO:0001704,GO:0001707,GO:0003002,GO:0003674,GO:0003824,GO:0004576,GO:0004581,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006493,GO:0006629,GO:0006807,GO:0006928,GO:0006996,GO:0007009,GO:0007029,GO:0007030,GO:0007043,GO:0007275,GO:0007368,GO:0007369,GO:0007389,GO:0007498,GO:0007509,GO:0008078,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009888,GO:0009953,GO:0009987,GO:0010004,GO:0010256,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0019991,GO:0022607,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0034329,GO:0034330,GO:0034645,GO:0035251,GO:0036211,GO:0040003,GO:0040011,GO:0042074,GO:0042175,GO:0042335,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043297,GO:0043412,GO:0043413,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045216,GO:0046527,GO:0048332,GO:0048598,GO:0048646,GO:0048729,GO:0048856,GO:0048870,GO:0051179,GO:0051674,GO:0061024,GO:0070085,GO:0071704,GO:0071840,GO:0090130,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons2
EggNOG free text desc.dolichyl-phosphate beta-glucosyltransferase activity
EggNOG OGsCOG0463@1,KOG2977@2759
EC2.4.1.117
Cds size204
COG Functional cat.M
CAZyGT2
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko01003,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464248.5747185-CDS-Ecto-sp13_S_contig9867:5420..55721681464248.5747185-CDS-Ecto-sp13_S_contig9867:5420..5572Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9867 5421..5572 +
1681464248.5885592-CDS-Ecto-sp13_S_contig9867:6064..61161681464248.5885592-CDS-Ecto-sp13_S_contig9867:6064..6116Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9867 6065..6116 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9867.21511.1prot_Ecto-sp13_S_contig9867.21511.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9867 5421..6116 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9867.21511.1

>prot_Ecto-sp13_S_contig9867.21511.1 ID=prot_Ecto-sp13_S_contig9867.21511.1|Name=mRNA_Ecto-sp13_S_contig9867.21511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
KSNKEAFPVCGDPPSKTLSVIVPAHNEEGRLPGMLKDTFTYLNTRRKTAD
SSFTYEVIVVDDGSTDGT
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mRNA from alignment at Ecto-sp13_S_contig9867:5421..6116+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9867.21511.1 ID=mRNA_Ecto-sp13_S_contig9867.21511.1|Name=mRNA_Ecto-sp13_S_contig9867.21511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=696bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9867:5421..6116+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAATCAAACAAGGAGGCGTTTCCCGTCTGCGGGGACCCTCCAAGCAAGAC
TCTCAGCGTGATCGTGCCCGCACACAACGAGGAGGGTAGGCTTCCGGGGA
TGCTCAAGGATACCTTCACCTATCTCAACACTCGCCGAAAAACTGCAGAC
AGGTGTTGTGAGTAGAGTCACGTGAGGCTGTGGTGTCTTTTAAGACAGCA
GTCGGTCAGACAGGCAAACTCGTTGGAGCTTTGGTGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCACAGCAGCAGAGTATTCAGCAGATGCACTACGC
ACACACCACACGAAACATTTGAGACAGGAGGCGTTCACGTAGCACCACCG
TGCTGTGTTATTCGGCGACGAGGCTGTACGGCAGGAGGGAGAGAATAGGG
GCCCAGTTAGTGGCCCGAATGGAGACAGCAACGTTTGTTACCTTCCCAGA
GTCGAGTGTTGGATGGCCGTGCTTCTGGTCGCGCGGAAACGAAAGCATGC
CGCCGCACTATCGCCGCCATTCCTTTCGATGGAAAGTTTCATGTACGCCC
GTGCTACTACCATGCGCGTGCCGAGACTTACTGTCCTCGTAACGTCCCGG
GTATGGCGTTTGACCACCAACCACCTTGACCTTACCAATGGCAGCTCCTT
CACCTACGAGGTGATCGTTGTTGACGACGGTTCGACGGACGGCACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9867:5421..6116+

>mRNA_Ecto-sp13_S_contig9867.21511.1 ID=mRNA_Ecto-sp13_S_contig9867.21511.1|Name=mRNA_Ecto-sp13_S_contig9867.21511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=204bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9867:5421..6116+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAATCAAACAAGGAGGCGTTTCCCGTCTGCGGGGACCCTCCAAGCAAGAC
TCTCAGCGTGATCGTGCCCGCACACAACGAGGAGGGTAGGCTTCCGGGGA
TGCTCAAGGATACCTTCACCTATCTCAACACTCGCCGAAAAACTGCAGAC
AGCTCCTTCACCTACGAGGTGATCGTTGTTGACGACGGTTCGACGGACGG
CACC
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