mRNA_Ecto-sp13_S_contig9855.21498.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE) HSP 1 Score: 370 bits (949), Expect = 9.400e-126 Identity = 188/268 (70.15%), Postives = 218/268 (81.34%), Query Frame = 1 Query: 4 LGGAAQGHPSLEGRTK---------SRRGFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGGSTVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLMHPAGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLPSK 780 LGG AQGHPS+EG + SRRG+LN+LVEAT LD +QV NVAFVKTHKTASTT+A+IMYRYAARH LKLS+FGG S L+SAA ETKEN Q VD+MHYHI+ +GQY GTW+EAV YR IMR+PDDINFVTVLREPRSHLLSYYYY++QP +Q SIEEFL+ ++ +H++L NPLSAEFGVRTAE++DS IS LPDFKL+L+ RL+EGLL L RMLHWHMIDLTYCDLNETK GSRRWDGK V+ P FDSLP + Sbjct: 4 LGGTAQGHPSVEGTPRKTAGDVGPQSRRGYLNQLVEATTLDHGNQVTNVAFVKTHKTASTTVASIMYRYAARHHLKLSYFGGSSVTDLRSAANETKENGQRVDLMHYHISPRGQYMGTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQPLHQQSIEEFLLSGHRNNIEHRMLSNPLSAEFGVRTAEEMDSFISSALPDFKLVLM--RLDEGLLTLGRMLHWHMIDLTYCDLNETKEGSRRWDGKTVVTWPQFDSLPKQ 269
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: D8LRU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU7_ECTSI) HSP 1 Score: 328 bits (840), Expect = 1.880e-109 Identity = 183/260 (70.38%), Postives = 185/260 (71.15%), Query Frame = 1 Query: 1 GLGGAAQGHPSLEGRTKSRRGFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGGSTVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLMHPAGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLPSK 780 GLGG AQ HPSLEGR K RR +LNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGGS VSLKSAAA+ ISIEEFLMH AGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLPSK Sbjct: 86 GLGGVAQDHPSLEGRMKPRRSYLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGGSAVSLKSAAAK--------------------------------------------------------------------ISIEEFLMHTAGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLPSK 277
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE) HSP 1 Score: 293 bits (750), Expect = 2.040e-95 Identity = 151/256 (58.98%), Postives = 195/256 (76.17%), Query Frame = 1 Query: 22 GHPSLEGRTKSRR--GFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGG--STVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLMHPA--GSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSL 771 G PS RT S G LN+LVEA+ D D+QVANV FVKTHKT STTLAA+ YRYA RH+LKL+HFG G + +LK AA +T+++ +LVD+MHYHI+ G+YTGTW +A +RRIMR PD IN+VTVLREPRSHLLS YY+YI P ++SIE++LM PA G H+L NPLSAEFGV+TA+++++ I + LPDFKL++LTER++E L++L +L WHMID+TY LN T+AG+RR+DGKP + RP F L Sbjct: 23 GEPSTP-RTSSGELAGHLNDLVEASARDADNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGKGKGTIANLKKAATQTRKSGELVDVMHYHISHSGEYTGTWPQAENYFRRIMRHPDSINYVTVLREPRSHLLSCYYFYIFPECELSIEDYLMDPAHAGDENRHRLR-NPLSAEFGVKTAKEMNTFIVNHLPDFKLVMLTERMDESLVLLRSLLGWHMIDVTYASLNATRAGARRYDGKPLIDRPDFCHL 276
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI) HSP 1 Score: 248 bits (634), Expect = 2.740e-77 Identity = 124/258 (48.06%), Postives = 177/258 (68.60%), Query Frame = 1 Query: 19 QGHPSLEGRTKSRRGFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGG-GSTVSLKSAAAET--KENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLM---HPAGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLP 774 +G G + R +LN LV + T+ Q++N+AF+KTHKTASTT A ++YRYA RH +KL+HF S + L+ A +T ++ + DIMHYH++ GQ+ G+W +A + YRRI+R+ +NFVTV+REPRSHLLSYYYY++QP+ Q +I EFL HP H+ L+NPLSAEFGV+ + L ++ LP+ K++LLTE +EGL+VL R+L W M+D+TY + +T AG+RR+DGKP V+ P F+ LP Sbjct: 68 RGEGKTVGGEPTNRSYLNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHFDDHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFEGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQTQKTIGEFLTQAKHPRDPI--HRRLFNPLSAEFGVKKRQDLRYVLEKALPNAKMVLLTEEFDEGLMVLRRLLRWEMVDMTYVSVYKTTAGARRYDGKPLVNAPRFEDLP 323
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI) HSP 1 Score: 239 bits (610), Expect = 1.700e-74 Identity = 121/249 (48.59%), Postives = 162/249 (65.06%), Query Frame = 1 Query: 58 RGFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGG--STVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLMHPAGSSKD-------HKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLPS 777 R +LN LVE T T Q N+AF KTHKTASTT+A I+ RYA RH++KL+ FGG S + L A + +E+ + VD+MHYH T G + G W EA Y +IMR+ + IN++TV+R RSH LSYYYYY+QP Q+S++ F GS++ + L NPL AEFG+ EQL I LPDF+L+LLTE +EGL+++ R+L W MID+TY + ETKAG RWDGK + PH++ LP+ Sbjct: 17 RAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFF----GSNRQDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGARWDGKELKNVPHWEDLPT 261
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE) HSP 1 Score: 239 bits (611), Expect = 1.910e-72 Identity = 121/249 (48.59%), Postives = 163/249 (65.46%), Query Frame = 1 Query: 58 RGFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGG--STVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLMHPAGSSKD-------HKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLPS 777 R +LN LVE T T Q N+AF KTHKTASTT+A I+ RYA RH++KL+ FGG S + L A + +E+ + VD+MHYH TT G + G W EA Y +IMR+ + IN++TV+R RSH LSYYYYY+QP Q+S++ F GS+++ + L NPL AEFG+ EQL I LPDF+L+LLTE +EGL+++ R+L W MID+TY + ETKAG RWDGK + P ++ LP+ Sbjct: 206 RAYLNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTTYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFF----GSNREDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGTRWDGKELKNVPRWEDLPT 450
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI) HSP 1 Score: 232 bits (591), Expect = 3.270e-70 Identity = 115/242 (47.52%), Postives = 161/242 (66.53%), Query Frame = 1 Query: 49 KSRRGFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFG-GGSTVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLMHPAGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSL 771 ++ R +LN LV + Q++N+AF+KTHKTASTTLA+I+YRY RH+ ++ F GG+ V L A+ + + + VDIMHYH G Y+GTWD+A Y +IM + D+N+VTVLREP +H LSYYYY++ P N++ I+E+L+ + KLLYNPL+AEFG+ Q++ I +P FK++LLTER +EGL +L RML W ID+TYC + +TK G RWDGKP + P L Sbjct: 141 EAMRDYLNGLVYDSASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKFDQGGTYVDLDVASKQVAKQGKRVDIMHYHHAWNGFYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNPINKMPIDEYLL----KNPHKKLLYNPLAAEFGIEDMAQMNHFIKKQMPKFKMVLLTERFDEGLALLQRMLQWDPIDMTYCKMLQTKKGEMRWDGKPLENVPKISDL 378
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: D7G4H5_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI) HSP 1 Score: 222 bits (566), Expect = 2.980e-68 Identity = 114/227 (50.22%), Postives = 149/227 (65.64%), Query Frame = 1 Query: 100 TDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGG--STVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLMHPAGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLP 774 T Q+ NVAFVKTHKTASTTLA I RYA RH+ KL+ F G S V L A + +EN Q VD+MHYH+ +G + GTW++ K Y++IM++ + IN++TV+R PR H LSYYYYY+QP N++SIE++L H + NP+ EFGV +QLD I LP F L++LTE + GL+ L R++ W MID+TY + ETK G RWD KP V P F SLP Sbjct: 9 TGGQMCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQENGQRVDVMHYHVH-EGVWEGTWEDNTKMYKQIMQEAEPINYITVVRSPREHFLSYYYYYMQPMNKLSIEQYLERTKRHPAQHMM--NPMCVEFGVHDKDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVRWDNKPLVDVPRFASLP 232
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: A0A6H5JVG3_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG3_9PHAE) HSP 1 Score: 222 bits (565), Expect = 2.890e-67 Identity = 121/257 (47.08%), Postives = 158/257 (61.48%), Query Frame = 1 Query: 10 GAAQGHPSLEGRTKSRRGFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGG--STVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEEFLMHPAGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLP 774 G+ G S T R LN +V + T Q NVAFVKTHKTASTTLA I RYA RH+ KL+ F G S V L A + +E+ Q VD+MHYH+ +G + GTW++ Y++IM+D + IN++TV+R PR H LSYYYYY+QP N++SIE++L H + NP+ EFGV +QLD I LP F L++LTE + GL+ L R++ W MID+TY + ETK G RWD KP V P F SLP Sbjct: 79 GSDHGEVSGLEETAKCRELLNLMVTESAGKTGGQKCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQESGQRVDVMHYHVH-EGVWEGTWEDNTNMYQQIMQDAEPINYITVVRSPREHFLSYYYYYMQPMNKLSIEQYLERTKRHPAQHMM--NPMCLEFGVHDEDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVRWDNKPLVDVPRFVSLP 332
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Match: D8LK91_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI) HSP 1 Score: 219 bits (558), Expect = 1.180e-66 Identity = 120/258 (46.51%), Postives = 160/258 (62.02%), Query Frame = 1 Query: 58 RGFLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGGG-STVSLKSAAAETKENRQLVDIMHYHITTQGQYTGTWDEAVKCYRRIMRDPDDINFVTVLREPRSHLLSYYYYYIQPRNQISIEE----------------FLMHPAGSSKDH--KLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTYCDLNETKAGSRRWDGKPFVSRPHFDSLP 774 R +LN LV+ ++ T +Q N+AFVKTHKTASTT A ++YRY RH+L ++HF G S++ L A +++ + VD+MHYH G Y G W EA Y++IMRDP +N VTV+REP +H +SYYYY++QP +SI E F AG + H KLL+NPL AEFG+RTA +L+S I D L F ++LLTE EEGL V RM +W ID+T+C + ETKAG R+DGK + P LP Sbjct: 7 REYLNLLVDESVAATKNQTCNIAFVKTHKTASTTAATLLYRYGKRHDLNVAHFHGHQSSIELPEAI---EDSGKPVDLMHYHHAWDGFYEGGWAEAKAAYKKIMRDPTKVNLVTVMREPVAHYMSYYYYFLQPETGLSIAEYFELSAKPGDPRYRGVFQRRRAGKAGWHGFKLLHNPLCAEFGIRTATELESFIRDDLQGFAMVLLTEHFEEGLAVFMRMFNWRPIDMTFCRVIETKAGVSRYDGKKLTNVPKTRDLP 261 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9855.21498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9855.21498.1 >prot_Ecto-sp13_S_contig9855.21498.1 ID=prot_Ecto-sp13_S_contig9855.21498.1|Name=mRNA_Ecto-sp13_S_contig9855.21498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp GLGGAAQGHPSLEGRTKSRRGFLNELVEATMLDTDSQVANVAFVKTHKTAback to top mRNA from alignment at Ecto-sp13_S_contig9855:2221..6109- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9855.21498.1 ID=mRNA_Ecto-sp13_S_contig9855.21498.1|Name=mRNA_Ecto-sp13_S_contig9855.21498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3889bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9855:2221..6109- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9855:2221..6109- >mRNA_Ecto-sp13_S_contig9855.21498.1 ID=mRNA_Ecto-sp13_S_contig9855.21498.1|Name=mRNA_Ecto-sp13_S_contig9855.21498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=783bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9855:2221..6109- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |