mRNA_Ecto-sp13_S_contig9853.21495.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: D8LD91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD91_ECTSI) HSP 1 Score: 228 bits (582), Expect = 9.240e-71 Identity = 109/121 (90.08%), Postives = 111/121 (91.74%), Query Frame = 1 Query: 7 LPGAGKSGSGGGPHEADPRQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQA 369 LPGAGKSG GGGPH+AD R ECWFCLASPQLEDHLVCSVADEIYLAQPK LVPGHVLIVPVSHQQRYSELSAEGAKEAE+YKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQA Sbjct: 237 LPGAGKSGFGGGPHKADGRLECWFCLASPQLEDHLVCSVADEIYLAQPKGG-----LVPGHVLIVPVSHQQRYSELSAEGAKEAEQYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQA 352
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: A0A836CFA8_9STRA (CwfJ C-terminus 1-domain-containing protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFA8_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.810e-35 Identity = 67/112 (59.82%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 34 GGGPHEADPRQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQA 369 GGGPHE D ++ECWFCLASP LE+HLV +VA+E Y+A PK LVP HVLIVP++H QRYSELS KE E +K + K Y CE F FERC TKGA+H+HIQA Sbjct: 595 GGGPHEGDQQRECWFCLASPTLEEHLVTNVAEEAYVALPKGG-----LVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQA 701
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: A0A7S2F7S3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7S3_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.200e-20 Identity = 47/104 (45.19%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 61 RQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKR-YCLSCGCEPFFFERCVPTKGAHHLHIQA 369 R +CWFCLASPQLE HL+ SVA+ +YLA PK +VP HVL+VP+ H R S+L E RYK+ + FERC T+G +H+H QA Sbjct: 121 RHDCWFCLASPQLEAHLIVSVAEHVYLAIPKGG-----MVPQHVLLVPIDHVTRQSDLGPPVLSELLRYKQGLAASFSADLDSAMVVFERCADTRGTYHMHQQA 219
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: T0PL36_SAPDV (HIT domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PL36_SAPDV) HSP 1 Score: 91.3 bits (225), Expect = 8.280e-19 Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 61 RQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQ 366 R ECWFCLA+P +E HL+ S+ DE Y+A PK +VP HVLI+P+ H LS A E +++K + ++ S G F +R V T GA H H+Q Sbjct: 284 RSECWFCLATPTVETHLIVSIGDEAYVAIPKGP-----IVPDHVLIIPIQHVSSMRSLSPAAAAEVDKFKSALEKLFASQGKSLIFMDRNVSTLGAAHAHLQ 380
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: K3X1K7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1K7_GLOUD) HSP 1 Score: 90.5 bits (223), Expect = 1.730e-18 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 61 RQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQ 366 R ECWFCLA+P +E HL+ S+ E YLA PK + + P H+LIVP++H+ +L A+ KE ER+K + + + S + F+R + T GA H H+Q Sbjct: 361 RTECWFCLATPSVERHLIVSIGQEAYLAMPKGA-----INPDHLLIVPIAHEASSMKLRADTWKEVERFKSALREFFASQDKDMIVFDRNIQTIGATHCHLQ 457
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: A0A1V9YNL6_9STRA (HIT domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNL6_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.080e-18 Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 61 RQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQ 366 R+ECWFCLA+P +E HL+ S+ DE Y+A PK +VP HVLIVP+ H + L A E +R++E+ Y S G +R V T GA H H+Q Sbjct: 277 REECWFCLATPTVETHLLVSIGDEAYVAIPKGP-----IVPDHVLIVPIQHVSSMAALKPAAAAEVQRFQEALAAYFASVGKALVTMDRNVATLGAAHAHLQ 373
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: A0A1E1XD38_9ACAR (Uncharacterized protein (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XD38_9ACAR) HSP 1 Score: 89.0 bits (219), Expect = 2.970e-18 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 1 Query: 58 PRQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQASTRDKDLFP 396 P+ CWFCLASP++E HLV SV D YLA K + L P HVLI+P+ H Q EL E ++ ++KES K++ + G P +FER + HL IQ + L P Sbjct: 161 PKGPCWFCLASPEVEKHLVISVGDTCYLALAKGA-----LTPDHVLILPIGHHQSTVELDEETLEDVVKFKESLKQFFKAKGKRPVYFERNYKSS---HLQIQVVPVPESLMP 265
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: A0A2D4CI85_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CI85_PYTIN) HSP 1 Score: 89.4 bits (220), Expect = 4.370e-18 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 43 PHEADPRQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQ 366 P R ECWFCLA+P +E HL+ S+ E YLA PK + + HVLIVP++H+ + LSA KE R+K + + Y + E F+R + T GA H H+Q Sbjct: 350 PPPVPERTECWFCLATPSVERHLIVSIGQEAYLAMPKGA-----INEDHVLIVPIAHEASTTRLSASCLKEITRFKAALREYNAAQDKEMILFDRNIATIGATHCHLQ 452
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: A0A1V9YUN7_9STRA (HIT domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUN7_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.300e-18 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 61 RQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQ 366 R ECWFCLA+P +E HL+ S+ +E YLA PK +VP HVLI+P+ H LS E +++K + +++ S G +R VPT GA H H+Q Sbjct: 274 RSECWFCLATPTVETHLIISIGNEAYLAIPKGP-----IVPDHVLIIPIHHVSGIKHLSQAALDEIKQFKSALQKFFESQGKSFIIIDRNVPTMGAAHAHLQ 370
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Match: A0A024G3I8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3I8_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.910e-18 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 61 RQECWFCLASPQLEDHLVCSVADEIYLAQPKASKRYSCLVPGHVLIVPVSHQQRYSELSAEGAKEAERYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQ 366 R ECWFCLA+P+LE HL+ S+ E YLA PK + + H+LI+P+ H++ +LS +E ER+K +R S G E F+R V + GA H H+Q Sbjct: 316 RTECWFCLATPELERHLIVSIGQEAYLALPKGALSHD-----HILIIPIVHEKSTIQLSPSCKEEIERFKSQLRRMFASEGKEMIVFDRNVHSIGAAHCHMQ 412 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9853.21495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9853.21495.1 >prot_Ecto-sp13_S_contig9853.21495.1 ID=prot_Ecto-sp13_S_contig9853.21495.1|Name=mRNA_Ecto-sp13_S_contig9853.21495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp MQLPGAGKSGSGGGPHEADPRQECWFCLASPQLEDHLVCSVADEIYLAQPback to top mRNA from alignment at Ecto-sp13_S_contig9853:2594..4118- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9853.21495.1 ID=mRNA_Ecto-sp13_S_contig9853.21495.1|Name=mRNA_Ecto-sp13_S_contig9853.21495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1525bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9853:2594..4118- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9853:2594..4118- >mRNA_Ecto-sp13_S_contig9853.21495.1 ID=mRNA_Ecto-sp13_S_contig9853.21495.1|Name=mRNA_Ecto-sp13_S_contig9853.21495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=411bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9853:2594..4118- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |