Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 280 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 207 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464247.185684-UTR-Ecto-sp13_S_contig98482:85..156 | 1681464247.185684-UTR-Ecto-sp13_S_contig98482:85..156 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig98482 86..156 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464247.196418-CDS-Ecto-sp13_S_contig98482:156..316 | 1681464247.196418-CDS-Ecto-sp13_S_contig98482:156..316 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98482 157..316 - |
| 1681464247.206722-CDS-Ecto-sp13_S_contig98482:331..378 | 1681464247.206722-CDS-Ecto-sp13_S_contig98482:331..378 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98482 332..378 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig98482.21490.1 >prot_Ecto-sp13_S_contig98482.21490.1 ID=prot_Ecto-sp13_S_contig98482.21490.1|Name=mRNA_Ecto-sp13_S_contig98482.21490.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
QHGPAKPLSWWWWTRSQALPSSRNDQVRHACVRARTVASSIVPLSRNVQF
ADFCATRTLQACVFSLFF* back to topmRNA from alignment at Ecto-sp13_S_contig98482:86..378- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig98482.21490.1 ID=mRNA_Ecto-sp13_S_contig98482.21490.1|Name=mRNA_Ecto-sp13_S_contig98482.21490.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=293bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98482:86..378- (Ectocarpus species13 EcNAP12_S_4_19m)
CAACACGGACCAGCCAAGCCTCTCAGCTGGTGGTGGTGGACCAGGAGGTG
GTGGACCAGGAGCCAAGCACTTCCGTCGTCACGGAACGATCAGGTGAGAC
ACGCATGTGTACGCGCTCGTACAGTAGCAAGTAGTATTGTTCCACTGTCT
CGAAACGTGCAATTTGCGGACTTTTGCGCCACTCGCACACTCCAGGCTTG
TGTTTTTTCCCTTTTTTTTTGAGCCACACGTTCCCGGTACACATGTTTGA
GTTGTCATGCGCCACCCGCACACCTGACATCGTATATTTTGTT back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig98482:86..378- >mRNA_Ecto-sp13_S_contig98482.21490.1 ID=mRNA_Ecto-sp13_S_contig98482.21490.1|Name=mRNA_Ecto-sp13_S_contig98482.21490.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98482:86..378- (Ectocarpus species13 EcNAP12_S_4_19m)
CAACACGGACCAGCCAAGCCTCTCAGCTGGTGGTGGTGGACCAGGAGCCA
AGCACTTCCGTCGTCACGGAACGATCAGGTGAGACACGCATGTGTACGCG
CTCGTACAGTAGCAAGTAGTATTGTTCCACTGTCTCGAAACGTGCAATTT
GCGGACTTTTGCGCCACTCGCACACTCCAGGCTTGTGTTTTTTCCCTTTT
TTTTTGA back to top
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