mRNA_Ecto-sp13_S_contig9845.21488.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: B5LWN3_9PHYC (Putative ubiquitin-like putative cysteine protease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN3_9PHYC) HSP 1 Score: 129 bits (325), Expect = 1.040e-32 Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = 2
Query: 113 LKGFKPAIWFNDTVVNVYFGMLRSNENPSSASCIFMPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEEHRAKRVPFDRREWASMEKKAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
+ F P W+ND +++ Y +L + NP+S + + T F L S + G+TRG+ K++IFIPVN+ N HWILV +D KR+ + VV N+ +W + +++ +W + +K +P Q +G+ CG FVC+ AA LSN R LS+ Q H+ A R+RI WSI
Sbjct: 130 INRFHPGRWYNDNIIDSYMALLGGSSNPASRKKAY---FFNTMFYPLLTHGGS-------------ISGYTRGIPITRKDRIFIPVNVHNNHWILVVVDAESKRIQHYNSMASVSEVVLENIKNWASKTYKS-------GDWVAEDKTSPMQKNGSDCGVFVCVNAALLSNKRKLSYTQNHMSAYRQRIAWSI 299
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: H3GKI7_PHYRM (ULP_PROTEASE domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKI7_PHYRM) HSP 1 Score: 116 bits (291), Expect = 1.170e-26 Identity = 68/202 (33.66%), Postives = 96/202 (47.52%), Query Frame = 2
Query: 113 LKGFKPAIWFNDTVVNVYFGMLRSNENPSSASCI------FMPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEE-HRAKRVPFDRREW--ASMEKKAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
L+ PA W ND V+N YF M+ + ++ + F ++ YTK + E + VR WTR +D +KIFIPVN+GN HW + I M KR+ D +L +L +E K+ FD W + PTQ +G+ CG F C+FA +LS NRPLSF Q +P R R+V +
Sbjct: 278 LQVMLPATWLNDEVINFYFQMMCDRDEALVSAGVLPKRSHFFNSFFYTKVS-------------ENGYNFINVRRWTRKIDLFALDKIFIPVNVGNMHWCMAVIFMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFDAEGWELVTTTTDTPTQNNGSDCGVFSCMFADYLSQNRPLSFTQKDIPFHRHRMVLHV 466
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: A0A7K6RXR6_9GRUI (SENP2 protease (Fragment) n=1 Tax=Rhynochetos jubatus TaxID=54386 RepID=A0A7K6RXR6_9GRUI) HSP 1 Score: 110 bits (276), Expect = 2.970e-26 Identity = 69/214 (32.24%), Postives = 108/214 (50.47%), Query Frame = 2
Query: 71 KILRAAFQPRSLIA-LKGFKPAIWFNDTVVNVYFGML--RSNENPSSASCIFMPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEEHRAKR-VPFDRREWASMEKKA---PTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
+++ +AF+ + A + K W ND V+N Y +L RS ++ A F T+ Y K YK VR WTRGVD + IF+P++L + HW L+ ID+R+K + D + + VL +L EE + KR + EW +A P Q +G+ CG FVC +A ++S +P++F Q H+P R+++VW I
Sbjct: 25 EVMSSAFKLKVTRADIHTLKICRWLNDEVINFYMSLLVERSRKDGYPAVHAFS-TFFYPKLIS---------------GGYKDVRRWTRGVDIFKMDLIFVPIHL-DAHWTLLVIDVRKKTIRYFDSMGQEGDNICQTVLQYLQEESQEKRKLELIASEWTLHSMQAHEIPQQMNGSDCGVFVCKYADYVSQEKPMTFTQSHMPYFRKKMVWEI 221
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: A0A7K9EI37_BARMA (SENP2 protease (Fragment) n=1 Tax=Baryphthengus martii TaxID=176943 RepID=A0A7K9EI37_BARMA) HSP 1 Score: 110 bits (275), Expect = 3.700e-26 Identity = 66/192 (34.38%), Postives = 95/192 (49.48%), Query Frame = 2
Query: 137 WFNDTVVNVYFGMLRSNENPSSASCIF-MPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPR--YVVRTNVLDWLGEEHRAKR-VPFDRREWA--SMEK-KAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
W ND +VN YF +L SS + T+ YTK Y V+ WTRGVD K+ I +PV+L HW L IDMR+K++ D R V +L++L EE KR +P +W S+E + P Q++ CG F+C +A ++S +P++F Q H+P R+RI W I
Sbjct: 41 WLNDEIVNFYFALLMERSKKSSYPTVHAFNTFFYTKLVS---------------GGYTSVKRWTRGVDIFKKDLILVPVHL-KVHWTLAVIDMRKKKISYYDSMGRSGKGMDVCETLLEYLQEESLQKRNLPLTLSKWTLRSVEPYEIPQQSNDRDCGVFMCKYADYISQEKPMNFTQTHMPYFRKRIAWEI 216
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: A0A091K8G6_COLST (Sentrin-specific protease 2 (Fragment) n=2 Tax=Colius striatus TaxID=57412 RepID=A0A091K8G6_COLST) HSP 1 Score: 112 bits (281), Expect = 2.090e-25 Identity = 67/213 (31.46%), Postives = 106/213 (49.77%), Query Frame = 2
Query: 71 KILRAAFQPRSLIA-LKGFKPAIWFNDTVVNVYFGMLRSNENPSSASCIF-MPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEEHRAKR-VPFDRREWA--SMEK-KAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
+IL +AF+ + ++ + W ND V+N Y +L + I T+ Y K YK V WTR VD ++ +F+P++L HW LV +D+R+K + LD + + + V +L EH KR + EW+ SME + P Q++G+ CG F+C +A FLS ++P++F Q H+P R R+VW I
Sbjct: 240 EILSSAFKLKVTRGDIQTLRNLCWVNDEVINFYMNLLMARSKKEGYPAIHAFSTFFYPKLLS---------------GGYKAVMRWTRNVDLFKQDMVFVPIHL-KLHWALVVVDVRKKSIRYLDSLGQNGHKICETVFKYLQAEHLEKRKLELSCWEWSLCSMEPHEIPQQSNGSDCGIFLCKYADFLSQDKPMTFSQPHMPYFRRRMVWEI 436
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: A0A5F8G528_MONDO (ULP_PROTEASE domain-containing protein n=1 Tax=Monodelphis domestica TaxID=13616 RepID=A0A5F8G528_MONDO) HSP 1 Score: 108 bits (270), Expect = 2.940e-25 Identity = 59/189 (31.22%), Postives = 95/189 (50.26%), Query Frame = 2
Query: 137 WFNDTVVNVYFGMLRSNENPSSASCIFMPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEEHRAKR-VPFDRREWASMEK---KAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
W ND ++N Y +L + + ++ F P R A Y+ VR WT+GVD ++ + +P++ HW LV ID+R+K + LD + T +L +L EE +++R D EW E K P Q++ CG F+C +A ++S ++PL+F Q H+P R+R+VW I
Sbjct: 59 WLNDGIINFYMNLLVDRNQKQGLPRL----HAFSTFFYPKLRAAG----------YQAVRRWTKGVDLFQQDLLLVPIHQ-RAHWSLVLIDLRKKSIQYLDSLGGKEPGICTMMLQYLKEESKSRRNAELDPTEWTLDEGRSWKIPQQSNSEDCGVFLCKYADYISQDKPLAFTQNHMPHFRKRMVWEI 232
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: UPI000522C328 (sentrin-specific protease 2-like n=1 Tax=Leptosomus discolor TaxID=188344 RepID=UPI000522C328) HSP 1 Score: 109 bits (272), Expect = 1.940e-24 Identity = 61/190 (32.11%), Postives = 93/190 (48.95%), Query Frame = 2
Query: 137 WFNDTVVNVYFGMLRSNENPSSASCIF-MPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEEHRAKR---VPFDRREWASMEK-KAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
W ND V+N Y +L + + T+ Y K Y+ VR WTRGVD ++ + +P++L + HW L IDMR+K + LD + + + +L EE R KR +PF SME + P Q + + CG F+C +A ++S ++PL+F Q H+P R R+VW I
Sbjct: 202 WLNDEVINFYMMLLIERSKKAGYPTLHAFSTFFYRKLVS---------------GGYQAVRRWTRGVDLFKQDLVLVPIHLTD-HWTLAAIDMRKKTIKYLDSLGQKGDKICATLFQYLQEESREKRKMELPFSEWTLRSMEPHEIPQQFNNSDCGMFLCKYADYISQDKPLAFTQSHMPYFRRRMVWEI 375
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: A0A7K8T0K0_9AVES (SENP2 protease (Fragment) n=1 Tax=Nyctibius bracteatus TaxID=48426 RepID=A0A7K8T0K0_9AVES) HSP 1 Score: 105 bits (263), Expect = 2.440e-24 Identity = 71/218 (32.57%), Postives = 103/218 (47.25%), Query Frame = 2
Query: 50 NPSRCVLKILRAAFQPRSLIALKGFKPAIWFNDTVVNVYFGMLRSNENPSSASCIFMPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEEHRAKR-VPFDRREWA--SMEK-KAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
+PS + + S+ L+ F+ W +D V+N Y +L N + ++++ F P +A Y VR WTRGVD + I +PV++ +HW LV ID R K V S D + +L EE R KR V EW SME + P Q + + CG FVC +A +LS ++PL+F Q H+P R R+VW I
Sbjct: 22 SPSEVLSSAFKLEVTRESMCTLRNFQ---WLDDEVINFYMKLLMERSNKEG----YPKVHVFSTFFYPKLISAG----------YDAVRRWTRGVDLFSCDVILVPVHM-REHWTLVVIDTREKTVKSFDSLGISGDWSCEVLFLYLQEESRKKRNVELTVSEWTLHSMEPDEIPQQYNTSDCGVFVCKYADYLSQDKPLTFSQIHMPYFRRRMVWEI 221
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: A0A7L2Z333_JACJC (SENP2 protease (Fragment) n=1 Tax=Jacana jacana TaxID=54508 RepID=A0A7L2Z333_JACJC) HSP 1 Score: 104 bits (260), Expect = 5.740e-24 Identity = 62/199 (31.16%), Postives = 99/199 (49.75%), Query Frame = 2
Query: 113 LKGFKPAIWFNDTVVNVYFGM-LRSNENPSSASCIFMPTYLYTK-FAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEEHRAKR-VPFDRREWA--SMEK-KAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
L+ + W ND V+N Y + + N+ + T+ + K ++G YK V WT+ VD + I +P++L HW LV I++R K V D + + +L +L +E R KR V + EW SME + P Q +G+ CG F+C +A + + N+P++FKQ H+P R+R+VW I
Sbjct: 33 LQTLRNLCWLNDEVINFYMNLVIERNKKEGYPAVHAFSTFFFPKLYSG----------------GYKAVARWTKNVDLFKYDIILVPIHL-RSHWALVVINIREKTVKYFDSMEQKGDYICKTLLKYLNDESRVKRNVVINILEWTVHSMESHEIPQQYNGSDCGVFMCQYANYAACNKPMNFKQAHMPYFRKRMVWEI 214
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Match: A0A6A3TAC2_9STRA (ULP_PROTEASE domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TAC2_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.070e-23 Identity = 63/202 (31.19%), Postives = 93/202 (46.04%), Query Frame = 2
Query: 113 LKGFKPAIWFNDTVVNVYFGMLRS------NENPSSASCIFMPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWTRGVDTLGKEKIFIPVNLGNKHWILVYIDMRRKRVLSLDGFRRPRYVVRTNVLDWLGEE-HRAKRVPFDRREW--ASMEKKAPTQTDGNSCGPFVCLFAAFLSNNRPLSFKQGHVPAMRERIVWSI 691
L+ P +W ND V+N Y+ M+ N S F ++ +TK + E + VR WTR +D +KIF+PVN+GN HW + I M KR+ D +L +L +E K+ FD W + P Q +G+ CG F C+FA +LS N+PL+FKQ + R R+V +
Sbjct: 293 LQVLLPGVWLNDEVINFYYQMMSDRDEALVNAGVLSKRSHFFNSFFFTKVS-------------ENGYNFINVRRWTRKIDLFAMDKIFLPVNVGNMHWCMAVIFMTEKRIQYYDSMLGSGAACLKILLRYLHDESEHKKKQKFDEEGWELVTCTPDTPQQNNGSDCGVFSCMFADYLSQNKPLTFKQKDISFHRHRMVLHV 481 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9845.21488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9845.21488.1 >prot_Ecto-sp13_S_contig9845.21488.1 ID=prot_Ecto-sp13_S_contig9845.21488.1|Name=mRNA_Ecto-sp13_S_contig9845.21488.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp MLRSNENPSSASCIFMPTYLYTKFAGPLPRNASRDPDDEAKERYKLVRGWback to top mRNA from alignment at Ecto-sp13_S_contig9845:1017..1719+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9845.21488.1 ID=mRNA_Ecto-sp13_S_contig9845.21488.1|Name=mRNA_Ecto-sp13_S_contig9845.21488.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=703bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9845:1017..1719+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9845:1017..1719+ >mRNA_Ecto-sp13_S_contig9845.21488.1 ID=mRNA_Ecto-sp13_S_contig9845.21488.1|Name=mRNA_Ecto-sp13_S_contig9845.21488.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9845:1017..1719+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |