mRNA_Ecto-sp13_S_contig9833.21479.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig9833.21479.1
Unique Name	mRNA_Ecto-sp13_S_contig9833.21479.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: D8LMR9_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR9_ECTSI)

HSP 1 Score: 663 bits (1711), Expect = 2.020e-239
Identity = 356/379 (93.93%), Postives = 359/379 (94.72%), Query Frame = 1

Query:    1 MSADPMDVEV-------------TXXXXXXXXXXMADPGAPGPTTSAAAVARLAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYECS 1092
            MSADPMDVE+             T  XXXXXXXXMADPGAPGPTTSAAAVARLAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI  ELALKVM+IELPA VMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATAR+  S
Sbjct:    1 MSADPMDVELESSCFATTKQVTATSKXXXXXXXXMADPGAPGPTTSAAAVARLAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPAAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARHMMS 379

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: A0A835YQB5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB5_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 7.160e-152
Identity = 225/340 (66.18%), Postives = 269/340 (79.12%), Query Frame = 1

Query:   70 DPGAPGPTTSAAAVARLAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARY 1083
            DP A    + AAA A       A  TLPWVEKYRPSSL+ELVAHEDIV IL  LI SNKLPHLLFYGPPGTGKTSTILACA+KLYG  F  M LELNASDDRGIDVVR QIKEFAGTKRLFSSGVKLVILDEADAMT+DAQFALRRVIE++T+HTRFC+ICNYV KIIPALQSRCT+FRFAPL+P+QI+ RL HV+  EKV  TP G +A++ LGQGDMRRVLNLLQSTHMA+ KVDE   YL A APL  D++  +  L+T + +D  + +  +T  KGY++GD+  EL L+++ +++P  V+ HLL+ +S+ E R+A GG+E+LQL +LVGAF  AR+
Sbjct:    6 DPAAKAMDSDAAARALAL---AASSTLPWVEKYRPSSLDELVAHEDIVSILTTLIESNKLPHLLFYGPPGTGKTSTILACARKLYGPTFSSMTLELNASDDRGIDVVRDQIKEFAGTKRLFSSGVKLVILDEADAMTSDAQFALRRVIERHTRHTRFCLICNYVGKIIPALQSRCTRFRFAPLRPDQIRSRLAHVIASEKVDATPAGEQAILNLGQGDMRRVLNLLQSTHMAHVKVDEDTVYLTAGAPLVSDVDAAQQWLMTGNIRDVVNLMQNMTVTKGYAIGDMITELTLRIIKLDMPPTVLAHLLEALSDIEHRMAFGGTEQLQLAALVGAFIIARH 342

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: A0A7S3UU54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU54_HETAK)

HSP 1 Score: 418 bits (1074), Expect = 4.310e-143
Identity = 210/311 (67.52%), Postives = 252/311 (81.03%), Query Frame = 1

Query:  154 WVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATAR 1080
            WVEKYRP++L++LVAHEDIVG+L KLI SN+LPHLLFYGPPGTGKTSTILACA++LYG  F  MVLELNASDDRGIDVVR Q+KEFAGT+RLFSSGVKLV+LDEADAMT DAQFALRRVIEKYT+HTRFCMICNYVN++IPALQSRCT+FRFAPL+  Q+ GRLQHVV+QE V +T DG +A++ LGQGDMRRVLNLLQ+T MAY +V +++ YL +  PL+EDM+ I   L     K  +D IL + ++KGY+L DI  ++ + V   E P  VM  LL  +S+ E RLA G +ERLQLG+L GAF  AR
Sbjct:   22 WVEKYRPATLDDLVAHEDIVGVLNKLIDSNRLPHLLFYGPPGTGKTSTILACARRLYGKSFASMVLELNASDDRGIDVVRNQVKEFAGTRRLFSSGVKLVVLDEADAMTADAQFALRRVIEKYTRHTRFCMICNYVNRVIPALQSRCTRFRFAPLQHGQVVGRLQHVVEQEGVPLTEDGRQALLDLGQGDMRRVLNLLQATFMAYGEVTKQNVYLTSGHPLEEDMDLIYQKLNNEDLKPTYDCILHMMSSKGYALTDILHDVGILVAATEYPPEVMCQLLIALSDIEHRLASGATERLQLGALAGAFQAAR 332

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: A0A7S2XZS5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZS5_9STRA)

HSP 1 Score: 406 bits (1043), Expect = 1.440e-138
Identity = 199/318 (62.58%), Postives = 253/318 (79.56%), Query Frame = 1

Query:  145 TLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYECS 1092
            +LPWVEKYRP +L++LV+ E I+ IL KLI SN+LPHLLFYGPPGTGKTSTILACA+++YG +F  M LE+NASDDRGIDVVR QIK FA T+RLFSSG+KLVILDEADAMT+DAQFALRRVIE+YT+HTRFCMICNYV+KIIPALQSRC +FRF PL+ +Q+Q RL  V+D+E V ITP+G E++++ G GDMRR+LNLLQST MAY +V     +L + +PL +D+E + + LL +SFK+++  IL L   KGY+L D+  EL + V  ++LP  V+  LL E+SN E RL+ G S++LQLG+LVGAF   +Y  S
Sbjct:   13 SLPWVEKYRPETLDDLVSQEAIISILNKLIDSNRLPHLLFYGPPGTGKTSTILACARRIYGKNFSSMTLEMNASDDRGIDVVREQIKNFASTRRLFSSGMKLVILDEADAMTSDAQFALRRVIEQYTRHTRFCMICNYVSKIIPALQSRCMRFRFGPLRSDQVQDRLNEVIDKEGVAITPEGKESILKHGNGDMRRILNLLQSTSMAYDEVTLETVHLTSGSPLPDDVEAVLHQLLNSSFKESYQFILGLAVTKGYALADLLSELVVLVSRVQLPPAVLCPLLSELSNIEYRLSSGASDKLQLGALVGAFVKGKYMMS 330

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: W2G592_PHYPR (AAA domain-containing protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=W2G592_PHYPR)

HSP 1 Score: 391 bits (1005), Expect = 1.750e-132
Identity = 190/327 (58.10%), Postives = 250/327 (76.45%), Query Frame = 1

Query:  118 LAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYECS 1092
            ++ R  + ++ PWVEKYRPSSL++L+AH++I+  L +LI + KLPHLLFYGPPGTGKTS I+A A++LYG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFS GVKL+ILDEAD+MTNDAQF+LRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRFAPL   Q+ GR++H+   EK+ +T DG +A++RLGQGDMRR+LN+LQ+T MA+  V+E + YLC   PL +D+E +   L   +F  A     ++   KGY+  DI  ++    M++ELP    ++L DE++N E RL++G +E LQL SLV  FA AR + S
Sbjct:   18 ISSRNRSTESWPWVEKYRPSSLDDLIAHQEIISTLNRLIDAQKLPHLLFYGPPGTGKTSMIIAAARRLYGKNYGSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSQGVKLIILDEADSMTNDAQFSLRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFAPLNESQVSGRVKHIAQLEKLNMTEDGFKAILRLGQGDMRRILNILQATSMAHDVVNEANVYLCTGNPLPKDIESVTQWLFNENFATAVRKCAEMQKLKGYATSDILQDVYRYTMELELPPRCRMYLYDELANLEHRLSNGTTEELQLASLVAIFAIAREQMS 344

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: A0A484DYU8_BRELC (AAA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYU8_BRELC)

HSP 1 Score: 390 bits (1001), Expect = 6.830e-132
Identity = 192/327 (58.72%), Postives = 248/327 (75.84%), Query Frame = 1

Query:  118 LAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYECS 1092
            ++ R  + ++ PWVEKYRPSSL +L+AH+ I+  L +LI + KLPHLLFYGPPGTGKTS I+A A+K+YG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFS GVKLVILDEAD+MTNDAQF+LRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRFAPL   Q+  R++H+V  EK+ +T DG +A++RLGQGDMRR+LN+LQ+T MA++ V+E + Y+C   PL +D+E I   L   SF  A    L++   KGY+  DI  ++    M++ELP    ++L DE++  E RLA+G +E LQL SLV  FA  R + S
Sbjct:   17 ISSRNRSTESWPWVEKYRPSSLSDLIAHQAIISTLNRLIDAQKLPHLLFYGPPGTGKTSMIIAAARKMYGKNYSSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSQGVKLVILDEADSMTNDAQFSLRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFAPLNDSQVSDRVKHIVQLEKLNMTEDGFKAILRLGQGDMRRILNILQATSMAHEIVNETNVYMCTGNPLPKDIELITQWLFNESFPTAVRKCLEVQKIKGYATSDILQDVYRYTMELELPPRCRMYLYDELAKLEHRLANGTTEELQLASLVAIFAITRNQMS 343

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: A0A2D4BMT8_PYTIN (Replication factor C subunit 5 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BMT8_PYTIN)

HSP 1 Score: 389 bits (1000), Expect = 1.070e-131
Identity = 191/323 (59.13%), Postives = 247/323 (76.47%), Query Frame = 1

Query:  118 LAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATAR 1080
            ++ R+ A ++ PWVEKYRPSSL +L+AH++I+  L +LI + KLPHLLFYGPPGTGKTS I+A A++LYG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFSSGVKL+ILDEAD+MTNDAQF+LRRVIEKYTK+TRFC+ICNYV+KIIPALQSRCT+FRFAPL   Q++ R+QH+   E++ +T DG +A++RLGQGDMRR+LN++Q+T MAY  VDE + Y+    PL +D+E I   LL   +  A     ++   KGY+  DI  ++    +D+ELP    ++L DE++  E RLA+G SE LQL SLV  F  AR
Sbjct:   20 ISSRDRATESWPWVEKYRPSSLNDLIAHQEIISTLNRLIDAQKLPHLLFYGPPGTGKTSMIIAAARRLYGKNYGSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSSGVKLIILDEADSMTNDAQFSLRRVIEKYTKNTRFCLICNYVSKIIPALQSRCTRFRFAPLHENQVKDRVQHIAQLERLNMTEDGFKAILRLGQGDMRRILNIMQATSMAYDTVDETNVYMTTGNPLPKDIETIVGWLLNEGYASAVQKCAEMQKLKGYATTDILQDVYKFTLDLELPPGCRMYLYDELAKLEHRLANGSSEDLQLASLVSVFFLAR 342

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: H3G8T3_PHYRM (AAA domain-containing protein n=5 Tax=Peronosporaceae TaxID=4777 RepID=H3G8T3_PHYRM)

HSP 1 Score: 387 bits (993), Expect = 1.150e-130
Identity = 188/327 (57.49%), Postives = 248/327 (75.84%), Query Frame = 1

Query:  118 LAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYECS 1092
            ++ R  + ++ PWVEKYRPSSL++L+AH++I+  L +LI + KLPHLLFYGPPGTGKTS ++A A++LYG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFS GVKL+ILDEAD+MTNDAQF+LRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRFAPL   Q+ GR++H+ + EK+ +T DG  A++RLGQGDMRR+LN+LQ+T MA+  V+E + YLC   PL +D+E +   L   SF  A     ++   KGY+  DI  ++     ++ELP    ++L DE++  E RL++G +E LQL SLV  FA AR + S
Sbjct:   18 ISSRNRSTESWPWVEKYRPSSLDDLIAHQEIISTLNRLIDAQKLPHLLFYGPPGTGKTSMMIAAARRLYGKNYGSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSQGVKLIILDEADSMTNDAQFSLRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFAPLNESQVGGRVKHIAELEKLNMTEDGFRAILRLGQGDMRRILNILQATSMAHDVVNEANVYLCTGNPLPKDIESVTQWLFNESFPTAVRKCAEMQKLKGYATSDILQDVYRYTTELELPPRCRMYLYDELAKLEHRLSNGTTEELQLASLVAVFAIAREQMS 344

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BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: M4BQG7_HYAAE (AAA domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQG7_HYAAE)

HSP 1 Score: 386 bits (992), Expect = 1.810e-130
Identity = 188/323 (58.20%), Postives = 243/323 (75.23%), Query Frame = 1

Query:  118 LAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATAR 1080
            ++ R  + +T PWVEKYRPSSL +L+AH++I+  L +LI + KLPHLLFYGPPGTGKTS I+A A++LYG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFS GVKL+ILDEAD+MTNDAQF+LRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRFAPL   Q+ GR++H+ + EK+ +T DG +A++RLGQGDMRR+LN+LQ+T MAY  VDE + Y C   PL +D+E +   L    F  A     ++   KGY+  DI  ++    MD+EL     ++L DE++  E RL++G +E LQL S+V  FA  R
Sbjct:   16 ISSRNRSTETWPWVEKYRPSSLSDLIAHQNIISTLNRLIDAQKLPHLLFYGPPGTGKTSMIIAAARRLYGKNYGSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSQGVKLIILDEADSMTNDAQFSLRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFAPLDESQVSGRVKHIAELEKLNMTDDGFKAILRLGQGDMRRILNILQATSMAYDVVDEANVYFCTGNPLPKDIELVVQWLFNEKFATAVHKCAEMQKIKGYATSDILQDVYRYTMDLELSPRSRMYLYDELAKLEHRLSNGTTEELQLASMVAIFAIVR 338

[Close]

BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Match: A0A6G0WP14_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP14_9STRA)

HSP 1 Score: 385 bits (990), Expect = 2.420e-130
Identity = 193/325 (59.38%), Postives = 246/325 (75.69%), Query Frame = 1

Query:  112 ARLAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDI--ELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATAR 1080
            A ++ +  +    PWVEKYRPSSL +L+AH DIV  L +LI + KLPHLLFYGPPGTGKTS ILA A++LYG ++  MVLELNASDDRGI+VVR QIKEFAGTK+LFSSG+KL+ILDEADAMTNDAQFALRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRF+PL   Q++ R++H+   E V +TPDG +AV+RLG GDMRR+LN+LQ+T+MA+  V+E + YLC   PL  D+  + N L T SF+D     L+L   KGY+  D+  ++  K  ++ELP    +++ D++++ E RLA G SE LQL SLV  F  AR
Sbjct:   11 AGISSKNRSTDNWPWVEKYRPSSLNDLIAHADIVSTLNRLIDAQKLPHLLFYGPPGTGKTSMILAAARRLYGNNYASMVLELNASDDRGINVVRDQIKEFAGTKKLFSSGIKLIILDEADAMTNDAQFALRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFSPLAEHQVKDRVEHIAKAENVNMTPDGFQAVLRLGGGDMRRILNILQATNMAHDVVNEANVYLCTGNPLPADITAMCNWLWTESFEDCVRQCLELQKLKGYATMDLLDQVYNKTNELELPPAARMYIYDQLAHLEHRLATGTSETLQLMSLVSVFIVAR 335

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9833.21479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
D8LMR9_ECTSI	2.020e-239	93.93	AAA domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835YQB5_9STRA	7.160e-152	66.18	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A7S3UU54_HETAK	4.310e-143	67.52	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2XZS5_9STRA	1.440e-138	62.58	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
W2G592_PHYPR	1.750e-132	58.10	AAA domain-containing protein n=18 Tax=Peronospora...	[more]
A0A484DYU8_BRELC	6.830e-132	58.72	AAA domain-containing protein n=1 Tax=Bremia lactu...	[more]
A0A2D4BMT8_PYTIN	1.070e-131	59.13	Replication factor C subunit 5 n=2 Tax=Pythium Tax...	[more]
H3G8T3_PHYRM	1.150e-130	57.49	AAA domain-containing protein n=5 Tax=Peronosporac...	[more]
M4BQG7_HYAAE	1.810e-130	58.20	AAA domain-containing protein n=1 Tax=Hyaloperonos...	[more]
A0A6G0WP14_9STRA	2.420e-130	59.38	AAA domain-containing protein n=1 Tax=Aphanomyces ...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	1
Seed ortholog score	664.8
Seed ortholog evalue	2.2e-188
Seed eggNOG ortholog	2880.D8LMR9
Preferred name	RFC5
Model size	1092
KEGG ko	ko:K10756
KEGG Pathway	ko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG Module	M00289,M00295
Hectar predicted targeting category	other localisation
GOs	GO:0000166,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005663,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006275,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019899,GO:0022402,GO:0022616,GO:0030554,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031348,GO:0031389,GO:0031390,GO:0031391,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034641,GO:0034644,GO:0034645,GO:0035639,GO:0036094,GO:0042623,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043599,GO:0043601,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051338,GO:0051347,GO:0051716,GO:0060255,GO:0061860,GO:0065007,GO:0065009,GO:0070013,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0090304,GO:0090329,GO:0090618,GO:0097159,GO:0097367,GO:0098813,GO:0104004,GO:1900262,GO:1900264,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1902296,GO:1902319,GO:1902494,GO:1902969,GO:1902983,GO:1903047,GO:1903460,GO:1904949,GO:2000112,GO:2000278,GO:2000573
Exons	9
EggNOG free text desc.	DNA replication
EggNOG OGs	COG0470@1,KOG0990@2759
Ec32 ortholog description	Replication factor C
Ec32 ortholog	Ec-02_003410.1
Cds size	1092
COG Functional cat.	L
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko03032,ko03036,ko03400

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9833.21479.1	prot_Ecto-sp13_S_contig9833.21479.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig9833 320..6121 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464246.3165367-CDS-Ecto-sp13_S_contig9833:319..484	1681464246.3165367-CDS-Ecto-sp13_S_contig9833:319..484	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 320..484 -
1681464246.3388925-CDS-Ecto-sp13_S_contig9833:1182..1242	1681464246.3388925-CDS-Ecto-sp13_S_contig9833:1182..1242	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 1183..1242 -
1681464246.3508904-CDS-Ecto-sp13_S_contig9833:1537..1630	1681464246.3508904-CDS-Ecto-sp13_S_contig9833:1537..1630	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 1538..1630 -
1681464246.364764-CDS-Ecto-sp13_S_contig9833:2043..2149	1681464246.364764-CDS-Ecto-sp13_S_contig9833:2043..2149	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 2044..2149 -
1681464246.3770728-CDS-Ecto-sp13_S_contig9833:2419..2579	1681464246.3770728-CDS-Ecto-sp13_S_contig9833:2419..2579	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 2420..2579 -
1681464246.3902476-CDS-Ecto-sp13_S_contig9833:3114..3268	1681464246.3902476-CDS-Ecto-sp13_S_contig9833:3114..3268	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 3115..3268 -
1681464246.399503-CDS-Ecto-sp13_S_contig9833:3773..3907	1681464246.399503-CDS-Ecto-sp13_S_contig9833:3773..3907	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 3774..3907 -
1681464246.4089735-CDS-Ecto-sp13_S_contig9833:4771..4964	1681464246.4089735-CDS-Ecto-sp13_S_contig9833:4771..4964	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 4772..4964 -
1681464246.4183543-CDS-Ecto-sp13_S_contig9833:6094..6121	1681464246.4183543-CDS-Ecto-sp13_S_contig9833:6094..6121	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9833 6095..6121 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig9833:320..6121-
coding sequence from alignment at Ecto-sp13_S_contig9833:320..6121-

protein sequence of mRNA_Ecto-sp13_S_contig9833.21479.1

>prot_Ecto-sp13_S_contig9833.21479.1 ID=prot_Ecto-sp13_S_contig9833.21479.1|Name=mRNA_Ecto-sp13_S_contig9833.21479.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=364bp
MSADPMDVEVTATSKGKGKGKMADPGAPGPTTSAAAVARLAHRETARQTL
PWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTI
LACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKL
VILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTK
FRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQ
STHMAYQKVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTT
AKGYSLGDIELALKVMDIELPAPVMVHLLDEMSNTEERLAHGGSERLQLG
SLVGAFATARYECS

mRNA from alignment at Ecto-sp13_S_contig9833:320..6121-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig9833.21479.1 ID=mRNA_Ecto-sp13_S_contig9833.21479.1|Name=mRNA_Ecto-sp13_S_contig9833.21479.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5802bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9833:320..6121- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGGCTGACCCGATGGATGTCGAGGTGAGGAGCAGATGTGTCAGCGG
CGGCGATGATTTTTGCGAAAATATTCAAATTTTGCGCGCTTTTCTCTTTC
TGTAGACTATATCTCCTCGCTCTCTCTCTTGGAGAATCATGTTGGTGAAT
CCACGCTCCACACCTCCTCGGAAATTGCCCACATTAGGAAACACTTTACG
CCAATCAAACTGCGTCCGTGTGTGTACCTGTCCGTACGTTGATCTCGGCC
GAAACGTTGATCGGCCAAACGCATCGTCAACAACGTGATTTTGATATGTT
AATGTCTGCCTGGAGGGAGACCTAGGCATGCCGGATTTTGTATGATACAT
GTGTTCAGTGAGGCAGTGGTACGTTGGCGTGCACAGCAGCGGCTCTGTCT
TGACCTGTGGCAGTGCCCACACGGTCTTGCTCTTATGCAATTCGATGGGT
AGCGTACTACCAATAATGAGTTAGGGTCAAGACATCTGAACCCAGGGATC
GTGAACAGCAATTGTTGGTGTAGCATATCATGGCAAGCAGTCGTAACGCA
GCGTTACATTTAAGTATCTTACCGCCTTGAAGAAGGGAGGCGACATGTAT
GAAAACGCGCCACGGAGGATAGCAGCAATCTCAGCAAGCAGATTTGCGGT
GAACCTTCTGCTAACAAGTATTCTCCTTGCCATTTTGTATGCCGCAGCCA
ACACGAAGTTTACGCTTCGATATGCGTAGCAAACTGACTCCTTCTGTCCC
ACTCGTCGAAAGGGGGCGTTTGGTGTCCAAACACCCTGTTTGGTTTGGAT
CCCCCGACATTCGCATCCCCTCGCGGGCCGCTTGATCCCCAAAGCGAGCG
AAACCCTTACTCGTTTAGGCCGTCGTCTACCAACCTTTTCCTTTGAGTAC
CAAATTATGGAGTACATGTTTTCTCTATCGGTTTGTCACGTGTGCCGGGA
CTCCTTTTGTGCTTCTTCTGTGGCACCTCGCATCCCGCCTCCATGACAAA
CATTTTGTCGGGGTTGGAACAAATACTGTTGAGTGATTTCCGAGAACGAC
GACGACAACAACAACAAGCATGACAAAAACAACAACAACAACAACAACAA
CAACAACAACAACAATAACAACAACTAGAACCCTCGTGCTTCGCGACGAC
CAAGCAGGTGACGGCAACAAGCAAAGGCAAAGGTAAGGGGAAGATGGCGG
ACCCGGGAGCGCCGGGCCCGACGACGAGCGCGGCCGCCGTGGCACGCCTG
GCGCACCGCGAGACCGCGCGGCAGACGCTGCCCTGGGTGGAGAAGTACCG
GCCCTCGTCGCTGGAGGAGCTCGTGGCCCACGAGGACATCGTCGGCATCC
GTGAGTTCCGTGGCCGTTGTACCCCTCTACTCTGCTGCAGTAAGGCGTCC
AGCCGGGCACACCCGCGCGCAAGACGGCTATATGTCAACCTCTACTACTG
CTGCTGCTGCGGCTGCGGCTGCGGGGTATTGCTTTCGGGGACGGACTGGT
GTCATGCCCAGGAGCCTTGTACCCCGGAAGAGTTGGTCGCGAACATGCAA
AAGGGCATCTCACCCTACGTCGAGGGTATCGGAAGCAAGGAACGGGGGTT
GGTCGAGTCTCGTTGTATGTTCCAGTTTCCAGTTTCCCCAATCTCTTTTT
TTCATCCATCTGCCGGCGTGTGTGTACCTTGCCAGACTGTATCAGTCGAA
TTACGGGATTGGAGTTCGTGCCCACTCTCGGTCTTGCTGAGTTCAGACCC
AGCAACACGTTTCCACATGCACGTAGTGCCAGGCCAGATACCATGAGAGA
GAATCATCGTGAGGAAAAGGAAATGTTTTAACCGATAGTATTGAGAACGG
CTCAAGTACTTCAATCCACATGTGTACACGTGTACATGCATAAGGCGCTT
TGGCGTCGTGTGGAGCGCTGCAGGTCAAGATCACACACGCAGACCGTCAC
CACCCAACCCCTGGCCCGAACGTGCAGGCGCTTCGTTTTGACCGTAACTC
GTCGACCTTCAGTCATGCTTTACACTGAATTTCGCGAGCACCAAATCGTC
CTAAACCCAGGATCTCACAGCGAGGAGCACCGAGGCAGGGCAATTTATTT
TTATCAGAAGAACCACCACCCTACGTGTACGCTCCAATAACATGGTCCTA
CCCTTGCCCCGCCCCTGCTCGTGTGATCTTGTGCTTTCGCGTGTCGGCGC
ACCGCGCGGTGCAGTCCAGAAGCTGATCGCCAGCAACAAGCTGCCGCACC
TGCTGTTCTACGGCCCACCGGGGACCGGGAAGACCTCGACAATCCTGGCC
TGCGCCAAGAAGCTCTACGGCGCAGACTTTAAGATGATGGTCCTGGAGGT
GGGCTTGCGTGCTGTTCGTGTTGTCGGTACATGTTGTCATTGCAGTGCTG
CGGTGGTCCCGATATATCGCGGTGTAGTGACAGACGAAAATCACCAGCGT
TATTTCGGGACCCGCGCTATTGCGGGAAGCTCTAAAGTAGTTTGTTGCGT
TGGTAGGCTTGGTTGTGCCAAGGAATTGGTACCGCGAGAATCCGGAATCG
CGCCCTCTCGGATCGGCGATATATCGGAGACTACTGCTGTAGTGCTATGA
AGGTTCAATGGAATTCTTGTTGATGGACGTACCAGCCCATGACCAACCGA
CGATGCATCCATGGTGGTTGCACCCGCAGTGTTCTTGGACACGAGCCCCC
GAGCGATTGGCGTTCTGTGATCGATCGGTCCTGTGGGAACAATACTCCGT
CCTCTCGACAACGTGTGCGTGGTCAATGATCTAACGGTTAAGGTATGCAA
GATATATGTGCGCCTCCCCCCCTCCCTCCACCCAAACTCCTCACCGTCAA
CAGTTGAACGCCTCTGATGATCGAGGCATCGACGTAGTGCGAGGCCAGAT
CAAGGAGTTTGCCGGCACGAAGCGCCTGTTCAGCTCCGGTGTGAAGCTGG
TCATCCTAGACGAGGCGGACGCGATGACCAACGACGCGCAGTTTGCTCTG
CGCCGAGGTAAGATCTGGAAATTGAAAAAATGAACAAGCGCTACGACACA
CCAGAGGCTACGGCTTTCGCCGAGTTTTGACTGAGCGGAGCAGATACAAA
AGGCTTCAGTTTGGACGTGGTGTGGAGGGCAAAAGCAATCGAGTGTCATG
TGGTTTTGATATTCGGGTTGAAGGGGTTAGGGTCATAGCTGCTGGTGACC
GCTCGCGGGCTCATGATCATGCCAACAGGCAACACGAGGGGGCCTTTGTT
TTTTTATCATGATTTACTCCCGTCGCAGGAGTTGTGTGGCGCGGCCCGAA
ATTCGGCCGACCACTTGCACTGAGACCTGTTTCTTCCTGCGCGTAGCTCT
ACCGAAGCGGTCCTGGCGTGAGCTGTACGCTTGGCGGTTGCCCTCCACCC
ACCCCCCCTCTCTTTCGCCCGTCTGATTTTTGGCCGTTAACCCCCCTGCG
CGCTCAAGTCTTCAACGCAGCTTGTTCCATCTGCAACATTCCCATATCCC
GTTTTGCCCTCCCCGCCCCCCCCCGCGCGCCTGAATTCCCAGTTATCGAG
AAGTACACGAAGCACACCCGCTTCTGTATGATCTGCAACTACGTGAACAA
GATCATCCCGGCGTTACAGTCGCGGTGCACCAAGTTCCGGTTCGCCCCCC
TGAAGCCGGAGCAAATACAGGGGCGACTGCAGCACGTGGTGGACCAGGAA
AAGTAAGCCTGGAGGAGATTGCTCCTGGGTATGTAGGCGCGGACAGGTCG
TATGCGTTGCTGCGGGTTCCGGCAGTGGCCGCGCTAGGGTGGCTGCTGTG
GGCGGCTGATGGAACAGACGTGGGCCACTAGGCCTCACGCTCAAGTCTTT
GCGCGACACGACGCCTAAGCACGCCTCTTTCGCCACCAGCGCTCTTTCTT
CGCGTGTGCTGCCAGGTGACCGTCCGCCTTTTTTCTTTGTTTTGTTTGTT
TGTTTATTTTTTTGTTGTCCAGAGTTACGATCACACCAGATGGCGTGGAG
GCGGTGATGCGCCTGGGGCAGGGGGACATGCGGCGCGTCCTCAATCTCTT
GCAATCCACGCACATGGCCTATCAGAAGGTGAAGGGCGGGATACCGAACA
CTACAAGCGTAGTGGTTGAATAACGATTTTTTCTGATGGAAGGTGGCGAC
GGAAAAGAAAGCAAAAAATATGAACAGAGTGCCGCTGCGCGGCAGCATGC
AGTGCGGCCGACAGTTTTGGTGAACTCCGCTACAGGGCAAACGATTTGTG
ATTTTATGGTGCAGGGTAAAAATATGGGTTATGGCTGATGGCCACACGCA
CGGTTCGTGATGTTTGTTGTGTGTTGGGGGAAGAGAGGCAAGATGCAGGA
AGTGTAATGCTGCTCAGTTTCCTGACAACGCTGCCATTTTTTTTGTTGCG
GATGTGTGCGATCTTCTTCTCTGATAACTCCTCCCCCATCCCACCCCCGC
CTGCCGCGCCCACTTCGCGCGTGGAATGTATGACACGGCAGGTGGACGAG
AGGCACGCCTACCTGTGCGCGGCCGCACCTCTGAAGGAGGACATGGAGTA
CATCCGCAACGCTCTCCTGACGGCATCGTTCAAAGTGAGATGACGCAACG
TGTTGCAGTTGGGTGGCGGTGAAGAGAGCCATGTGCGACGTTCGTTTAGA
GCAGAGGAGCCGTACGCAGCCTTTGTTTTGTCCGTGTGCAGCTTGGTTTT
CTCGTTGTACTGTATGTGGCAAGCGTTGGTAAAGTCGAAGACCGTTCCTG
TCCCACAGGTAGTGATGCTGATCGATGGTTCTCCCAAGGGAAACGGCACG
ATTCTTCCTTAACAGTATGTTCCCCTTTGCAGCGCTCTCAAGCCGACGAC
TTTCTTTCCCTCTCTTTTAATTTGTTTAGGACGCGTTCGACGGCATCCTG
AAGCTGACGACCGCGAAGGGATACTCCCTCGGGGACATCGTACAGGCGAG
AAACAACCCAAAGCACGAACAACAAACGACCGGCCTTTTTGCAGCTGCGT
CGTGTCTGATTCCTTGCCCCCTGAGTGTTAATTAACAGCAGTGGCACCGA
TTTTAACTCTGGCTCCCTACAGACTTTCTGTTGGGACACGTCTTGTACGG
TATACTGCTGTCGTGGACTCTGTTCTTTCGACGATCCCGCATGGATTTCG
GAGAGGAGAACGCAAACGTTACCCTCGGTTTCTGGCAATGTTCATTGAGA
GCGCGAGGCTGCCGCAAGCACGCGTCGGCTGACTCTCCGCGTGGTGTCGA
ACGGAGCCAAACGCCGGGGTTACGTCGCTTTCAACGGATGGTTGTGACGT
TTCAAGCGCTGCCTCTGTCTGCTACAGCTGTCGCCCCCCCCCCCGACGTT
GACTTGTTCGCAGCCCGTTTTCGATGGCGGGACTTCTCCTCTCCCGAAGT
GTAAGAACGGGCAAAAAGAAGGGGAGGGAGGGTCCTTGCGCTTGTTTTTT
TTTGTTATTTTTTTGTTTTATTTTTGGGGGGGGGGAGAGGTTTTCCCCGC
GAGTAGAGCAGGCTTTTACAACTTGAAACAAACAAGAATGGACACCATCG
GTGACGAAGGCGTTGACATTTTGCCGTGGACGATCTCCCGCCCCCCCCAA
CCCCCCGTTTCTCTTGGCGGTGTTCCCGATCCCGCAGGAGCTCGCGCTGA
AGGTGATGGACATCGAGCTGCCCGCGCCGGTGATGGTGCACCTGCTGGAC
GAGATGTCCAACACGGAGGAGCGGCTGGCGCATGGGGGCTCCGAGCGGCT
ACAGCTAGGGTCCCTGGTCGGCGCCTTCGCTACCGCCAGGTATGAATGCA
GC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9833:320..6121-

>mRNA_Ecto-sp13_S_contig9833.21479.1 ID=mRNA_Ecto-sp13_S_contig9833.21479.1|Name=mRNA_Ecto-sp13_S_contig9833.21479.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1092bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9833:320..6121- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGGCTGACCCGATGGATGTCGAGGTGACGGCAACAAGCAAAGGCAA
AGGTAAGGGGAAGATGGCGGACCCGGGAGCGCCGGGCCCGACGACGAGCG
CGGCCGCCGTGGCACGCCTGGCGCACCGCGAGACCGCGCGGCAGACGCTG
CCCTGGGTGGAGAAGTACCGGCCCTCGTCGCTGGAGGAGCTCGTGGCCCA
CGAGGACATCGTCGGCATCCTCCAGAAGCTGATCGCCAGCAACAAGCTGC
CGCACCTGCTGTTCTACGGCCCACCGGGGACCGGGAAGACCTCGACAATC
CTGGCCTGCGCCAAGAAGCTCTACGGCGCAGACTTTAAGATGATGGTCCT
GGAGTTGAACGCCTCTGATGATCGAGGCATCGACGTAGTGCGAGGCCAGA
TCAAGGAGTTTGCCGGCACGAAGCGCCTGTTCAGCTCCGGTGTGAAGCTG
GTCATCCTAGACGAGGCGGACGCGATGACCAACGACGCGCAGTTTGCTCT
GCGCCGAGTTATCGAGAAGTACACGAAGCACACCCGCTTCTGTATGATCT
GCAACTACGTGAACAAGATCATCCCGGCGTTACAGTCGCGGTGCACCAAG
TTCCGGTTCGCCCCCCTGAAGCCGGAGCAAATACAGGGGCGACTGCAGCA
CGTGGTGGACCAGGAAAAAGTTACGATCACACCAGATGGCGTGGAGGCGG
TGATGCGCCTGGGGCAGGGGGACATGCGGCGCGTCCTCAATCTCTTGCAA
TCCACGCACATGGCCTATCAGAAGGTGGACGAGAGGCACGCCTACCTGTG
CGCGGCCGCACCTCTGAAGGAGGACATGGAGTACATCCGCAACGCTCTCC
TGACGGCATCGTTCAAAGACGCGTTCGACGGCATCCTGAAGCTGACGACC
GCGAAGGGATACTCCCTCGGGGACATCGAGCTCGCGCTGAAGGTGATGGA
CATCGAGCTGCCCGCGCCGGTGATGGTGCACCTGCTGGACGAGATGTCCA
ACACGGAGGAGCGGCTGGCGCATGGGGGCTCCGAGCGGCTACAGCTAGGG
TCCCTGGTCGGCGCCTTCGCTACCGCCAGGTATGAATGCAGC