mRNA_Ecto-sp13_S_contig983.21476.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig983.21476.1
Unique Name	mRNA_Ecto-sp13_S_contig983.21476.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig983:6567..15053-
coding sequence from alignment at Ecto-sp13_S_contig983:6567..15053-

protein sequence of mRNA_Ecto-sp13_S_contig983.21476.1

>prot_Ecto-sp13_S_contig983.21476.1 ID=prot_Ecto-sp13_S_contig983.21476.1|Name=mRNA_Ecto-sp13_S_contig983.21476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
MRSLLACLAVSSSPAALLLPQLSFSETRSQRKPSQARGAMVSLAWLSPLF
LLFQLGRGAEDHNKRNMSTTMHLGIVGKVRVAWFVG

mRNA from alignment at Ecto-sp13_S_contig983:6567..15053-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig983.21476.1 ID=mRNA_Ecto-sp13_S_contig983.21476.1|Name=mRNA_Ecto-sp13_S_contig983.21476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8487bp|location=Sequence derived from alignment at Ecto-sp13_S_contig983:6567..15053- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCAGCTTGCTCGCTTGTCTGGCTGTCTCCAGCAGTCCAGCAGCTTT
ACTACTACCACAACTCTCTTTCTCCGAGACGAGGTCACAGCGCAAGCCCA
GCCAGGCGAGGGGGGCAATGGTTTCCTTGGCATGGCTTTCGCCGCTCTTT
CTCCTGTTCCAGCTAGGCAGAGGCGCTGAAGGTAAGACAGCAACATTCAT
TCGTGGGACGCTGCCACGCCACATGCAACCAGTGCCCCGGCGTTTCAGCG
CAAACCTCGCCAACCTTTTGACCCTGGTCTGTAGGTCCGAATATCTCCTG
CCCGGGTGATAGACGCGCAACTTGGTCGCGGAAATCGCGTGTGTGTTTCG
TGAATATGCACACGGCGAGGGAAGAAACAAGGTCTGCTGTTGTACACGCA
CTTCCAAGTGGGGGTGAAGCAAAACAAGATTTTTCCGTTACACCTTCCTT
CTGCTGCAGACCAATGTATGTCTGCTGCCTTGTTCGAACGGTGTAGGCTG
GCACCCAAAATGCGCGCATATGGGACCATTGGGTGGGACGAAACACCTAT
TGTCACTGATAAACCGGTTAGTATTTGCTGACATGTAATCTCAACCGAAA
CATCTTTTGCGGAAATATTTATTCGTATGTAGCAGTTACGACCTCTTGCT
AAATAACCTAATCCTAAATTTGGAGAAACCGGCAAGCTGGTGACTCCTAT
ACAACCAAGTGCTTTACGTACCTCGACTGACATGCGAACACTGCCAATTG
TCCGCCTACAACTGCAACCGACCACCTGTCGGCGCACTCTTTTGCCAGAT
GTCACTATCGTGACGATACCGCCATGCGCCACCAGCTGAGGAGCAAGTGA
TACGTATTTTCTTCTTTTACCCTTGCCAATGTTGCACAGCGATGCCGCAC
CAACAATTTAAACGTTCGGCTTGTGTAGCTCCATATCTACCGATCGGATG
AATGCACCACTCTCCGTGTATCCTCACCGATGCTGCATGATTCGCAACGT
CAACTTGATGCAACACTTACCGTGATACCTGCTACAGACATGTATAGATT
GTCCCATTAGCATACGTCTGCAGTACCTTCAACAGTGCCTGCCGACTGCT
GACGCATTAGGTGACATAAGATACCACTCCCCCGATTTTCAAAGCTCACT
ACACGATGAAGAAGATGCCCCAATCAAGAAGACGAGTTTCCGGAAACCCT
CGACGAAACGGCTCCAACGTCGTCGTTTTCCCCACACCACTCTTTCTGCT
AAGGAGTAATGGTGCTTTGAAAATCCGTCCAGGGTGTGTGATATCATATG
ATGCCTATCAACCGCATATTTGCTTTCTGTGGCCTGTTCAACAAGGGTGC
AACAACTAACAAAAAACCCACCCGAACATCCTCCGGACACTGTTCTTCTA
CTCCTCCCTCGCATAACATGTAGTCAGATGCACAGGACAGCTACTAAGCT
GTCGTGTTGAGCCTGTTAATCACTAGGGAGATGTCTGTTCGATGTACAGC
TTGTCCATATCACCCACCAAACGCTACGTCAGCGCTGACTTGTAACATGC
ATGTGGATATGATATACATCTAGCAATGCCTCTATATGCTGCTCAGGGAG
TAGTGTACGTTCACGTTTTGAAATCGCTTCCCACATGTCTTGGATTCTTA
ATGTGTGGATCGAGATTTAGTCGTTGTATTCAAAAAGTATGCGTGCGTAG
GTTAGTAACTCGCCTGCATCCGTAGTTAGGCAATTTCGTACGCCGCCGCC
CAAGGTGCATGGAGAAATTCGCCCGGAAAGCATAAACTGAGTATCCTTTG
TGCACCGCCTCTTGTATACGCTATCGTGAATTGGGGTCGCGATATGCCCA
AAACGCGGCAGAGTATCCAGCAGATGCGTTCACCAACCTACGGCGGTACA
TGCACACGACGATGAACTCCGTAGAAAGCAACAGCTGTATGGTAGTGCGG
TCCTGAAGCACAGGGGCTGCTTTTGCATCACCTTTTCGTCAGCTCGCATG
CCCTACATTTCAACGGTTGGTTGTTCCCTGGTCGTGTCCAGGCCGCAAGG
GAGCGGACTACTTTTCGCCTTAATTCTAACAAACTATCCTCGACGCCGCG
ATGTTTCAAGCACACCCCTAACAACTGCAACAGCGGTCGAATGGTGGTGG
AGCTGTCGACGAGTATCACAGGGAAACTTTTCGTTTTTTCGCTACATTGT
AGCAGCTCGGGTGGCTTACAGCAATGTAAAGCTGACAAAGTATCGTCGTT
CGGCTTGTATCTCCCTTCTGCCCAACCTACATAGCGCGGCTCCACGGCGC
AAGGGATGGATGAACCTGCTTTAGAGAGCGATCATGTCCATAAAACCGCC
AATGCCGGCGATGATACGAGCCCAGACGGGTCTCTATCCCGCACACATTC
AATTAGGAAATTAAATCTGACGGTTTTATGGCGCAAAGATGTTTACCGGA
ATTTGGCGTCACTACGCAAGATCATGCCACATTTTCCGGGTTGGGGAGTG
GAAGTGCACGAATCCTGACTTTTGGGGGGATCTTTTTGATTGGGCATCTC
TCAGGCGATTTCTCACGCCGGGTTGTTACTGTTTTTGTGTGGGAAGGGGA
GGGTCATTTTCTTCGCCCAAAAGATGTTTAGGCTTCTTACGCGGAGGACA
ACGCCAAATTCTTTCAGCCCGAACGTTTCCAAGGATTCCGGGCGGCGAGT
GAGAAAACGGGCCATTTTGAGAAAATGGGTCCATCTTCTCGCTGGATCGG
CTGATATTTTCGCTGAGAAAATGGAAGGGGTCACAAGCCGATCATGCCAC
AATGAGAAACTACGCCGTCTGCTCCCCAAACAGAGCCAGTGTCGTCCGGT
CATGCACAAACCCGTTGCAGGTATATATTATTCCAACTGGGAAGTTACCG
TTGGGATCGTGGGGGTGCTTCGTATACTGTTGGCCGTGCTTACTGCGTGG
ACGCTTGCGGCTCTCCACCGTCAGTGGCAGGTGCTTGCTGGGTCAGTTTG
GCAAAGCATTCCTTACTTCAGCACTCGAGAAAATTGTTCCCTTTGAAAAT
TTGGTTGATTAGCTCATGTAGGCTACATCATGTTTATTGCCAGCAGCAAC
CGCCGCAGGCACACCCGTTCGGAGCCAGCGGTGTTGACATCAGGGCACAC
CATCCCCCTGCAAGGGCATTTATATTTCGCCCCAAGTTATTCTCCGCTTC
GGCCCTGTCCCTGCCGGCCGTTCAATTATATCCCCCTTCACAGCAGGCTA
CCCGCCTTGGGAAGCCCATCCCTCGACATGCCCTTTTCACGATTGACACG
TCGCCAGCCTCCTGTTCGCTATGAAATTATCCATGATGTTGACGCTACCT
CAAAATGTCGTCACCTTTTCTATCGCCTGTCTTTCGTTCTGTGGAATAGA
CTCCGTTCGAGATATCACGCTGGGTGCCAGCTACTCGAGCGAGGTTCGCC
AACCCCTTTCTGAAGTCAAGTTGCCAGAATCCCTGGAAAAGCTAACGTTG
GGTGAATTCTTTGATGCACCCCATGGCAGCATCGCATGGCCCGAGTCTCT
GAAAGAGACACGGTTTGAAACGAGGAACATTTTTGGTCAAGGTGGCTTCA
ACCATCCCGTCGCCGAAGTGGTGTGGCCAGGTTCCCTTGAGAGGCTGATT
TTTTGCCCGCAACTTCAGTCAACCCATCGAAGAAGTCGTGTGGCCAGCGT
CCCTGCAGCAGCTGTCGGTTTGACCCACATTCGACCACCCGCTAGCCGCA
GTCTCGTGGCCTTCCTACCTACAGGAGCTATTTTTCGGGTACTCGTTTAA
CCAGCCGATTGTTGGAATTGTATGGCCGGCGTCCCTGCAGCAGCTGTCGC
TCGGTCCACTTTTGACCAGCCCATCGCCGGAGTAGTGTGGTCAGTCTCCC
TGCAGCAGCTACCTTTTGGATACGCATTTGACCGGCCGACTGATTGGGTC
GTGTAGTCGGACTCGCTGCAGCAGCTGGCATTGGGGAATACATTCAATCA
ACCCATCGCCGGAGTTGTGTGGCCGGCCCCCCTGGGGCAGCTTTCGTTTG
GCGAACACTTCAACCAGCCGATCGCTGAGGTCGTGTGGCCGTCATCGCTT
CGAATGCTGCAATTCGGTTGTGGGTTTAATCAACCCATCGAAAGAGTCAT
TTGGCCAGAGTCCTTGAAAGAGATATCGTTCATGACATGGTTTTCCAGCG
AGAGCGGGTTCAATCAGTCTATTATCGGAGCCGTGTGGCCGCCCTCCCTG
CAGCAGCTATCGCTTGGAGATGCGTTCAACCAGCCTGTTGCCGGAACCGT
GTGTCCAGCGTCCCTGCAGAAACTATGGATCGGGGATGCTTTCAAACAGC
CGATTGCCGGAGTCGTATGGCCGGCCTCCCTTGAAGAGCTAAATCGCGGC
TTACAGTAGTGTTCAATCACCCCATCGTGGAAACCGTGTTGGCCGGCTTT
CCTTTCTAAGCTGAATTCGAGCCCGGCCTTCAATCAACCCATCGCAGAAG
TCGTGTGCTCGGCCTCCCTGCAACAGCTTTCGCTCGGAGATGTTTTCAAC
CAGCCCATTGCCGGAGCCATGTGGCCGGCGACCCTGGAACGACTAAAGAT
CGGGAATTCTTACAACCAGCCGGTTGCAGGAACCGTTTGGCCGGCCGCCC
TTCAATTCCCTCAGTTTTGGAACCAAGTTCGATCAGCCCATCGCCGAAGA
GTGTGGCCGACGACGCTCCGACATGTACGGTTTAGGAACGACTTCGATCA
ACCTCTCCTCGAAGTCCTGTGGCCAGATTCCCTGGTCAGACTGAGTTGCG
GAAGGCGGGATCGACCTGTTGTTCGAGCGGGCCGATCACCCGTAGTGCGC
GGTGATTGAGGGCAAGCCACGGAAGTCATCCGCACGCACATGGCTTTCTT
CTCAGGGTCTCAAGCGTGGTCGCCAGCCCGCGTGGGCTACGCCACAAGGT
GTTGTAGCCAGCAGCAAGTAGTCGGTACAGGTGCGGTTGCATCGCGTGCC
GGTACAAGCACGGTTGCATCGCGTGACTTGCCGGGTGAATCGGACGGAAT
CATATGCTGCTAACACGAACCCCTCCGCGGAACGGGAGGGACAAGATTTC
CTTCTTGTTTTTCTTGGGGATGCTGACTGCAACCCCAATTTGCAAAAACG
GAACACCGGTTGCAGTGTTTCAGCGTAGGAAATGATTGTTTGTTGTTGAT
GATGCCCAATTGTTGTGTTACAGAGACTGTAGCTGATGAGTCTTTTCGGC
TTGGCGTCCAACATTGAGCGGGGGTGTGCTCCTTCTCGTTTCGGGGGGGG
TTGCAATCCCCTGCTAATTTTTTTCGGAGCTTGCTCGAGCTACATTATTA
CCTCTTGGGGAGTGGTAAACGTATGTGTCGGTCTTGTTGTGCAGTCAGAA
ATGTCAGCCTAAGTTACAGTTGTTGACCACAAGCGCACATTGCAAGAAAG
AACCTGTGCAGGGTCATCTACTTTAGTCATAGCAATCCAAGAAGTAATGC
AGCTAATAAGTTTGTGGCTGCTCCATGTATTGCCCCGATGCTGCTGTGTT
CACTCTTTCCGCTCTTCGACATTCATTCCCTGGACATGCACCCTGAACCC
CATCATGGAATTCATTATTTGTGCCGACACCCGACGTCAAAGACGAAGTC
GCCCATGTGAAGTTAGGGCTGTCTCGGCGAGCTAGAGGTCGTATCGAGAC
CGGCGGAAACCTCGCAAATATCCATTCCCGCCTGATCCCATACCTTGCAG
GATGATGAACTGATAAAGGAACACGTATGAACCATGTGATCACTCGACAG
ATACCTGGTGACGCCGCTCGCGTCCTCGGCGAGCTGCAACACACGCCATC
GGAAGAGCAAAAGAGCAAACTGCAGTGTAGACTTCAAGTGATCTTGACTT
CAACGTAGAGGTTGAAAGAGCATCTAGCCACTATACTCGTAAAGGTGGAG
CATGCAAGTGTGGAGGGCAATATTGATTGGATCTGTAGTAGGTTCTGCAT
CATCAATAGGGAAACAGGGTGCAACATCGCACCCCAAACTCGTTCAATTT
TGCGGAAGAGCGAGGGCGAGGGGTGAGGCGAATCGGCGAAGTCATAACAC
CCGAAACAGGCAATAGTACCCATTGTATGTAGAGCGAGAGCGGCTAAGGG
TTTCGAAAGACGATTCCCTGGGAATTGTGTACATGTTGGGATCTCAACAT
TGAAAAATGACACTTTTTCTCATCGTTTCACACCCGTAATCCTTTTTTCG
ACACGACAGAAGAAGCTTCGAAACCACATCCTCCGTGCCCTTAGGGCTCT
CAGCCGTCGCGAAAGCTCCCGCTCGTCCCATAGTGACCAGTGGTTGCCGA
GATATGGCGCAAAATAATGTCACGGCACCACCTCGGCGATGTAAAAAATT
GTCGTGTGTACGACACCGTAAACACCTTCCGCAAACACGTCCAATTGGCA
CGAACCCAATTGAGTTGTGTTTCCACGGCCCTCGGTCGTCGCACAAGCCA
TCATTTGGCCAAAATCAAAATGTGGTTTGCGAGATACGCCCAAGAACGTG
GCCGCAGCACCACCTCGGCGGTGTCGTAAGGCCCTTATTTACGACACCGC
ACAAACTTCCTGAAATCATCTCAAACGGCCGTAAAACTACTTTTTCTGTA
TCCCCGCGGCCACTGTCGCGCAAGTCGTTGTCGGCCGAAACCAATATGTG
GTTACCATCATTCATGTAGTCCTACATGTCGCCTCTCTTAAGACGACGGA
ACGAGGGCACGGGGCGGATCCGCTACAAAATCCACAGAGAAGGCGATCCC
CATCGTTGCATACCAACGGATGGGAAACCTGGTCACGTTGGCAAGAATTT
TCGTCAGCACGTTGGCGAGCGCACAGCACCTAGAGGTCCACAGGTGCTGT
TGTGAAACGACTCCGACCGACGTAAGTGTAAACCTCGATGGTGAAAGAAG
TGGGGGGCGGAAGCGAGGGTACCTCATGTTTCTTTCACCAGGAGTATTAC
TTGTCGAGGGAACCGATGTGCATCTGAAACTAAACTCTTCGTCGGTCGTC
GAATTGGGAGTGAAAATCGTGCAATAATTATGTGACATCCCAAAAGAGAA
TGGCATGGGTACTTGAAGAATTGAAGCTCAATGCAAACACGGTCTTCATG
TTCTTGCCCATAACATTCATTGGCATGTCCCAAGTTCCGATGTGAAACCG
AGTTCCGACTCCTTTCAAACATGCTGTCTCAATGTTATAATCCTACGTTG
GATCTTCATTCCTACGGTCCATGACATTCCTGTCGAGGGCTTTGACTGTA
CCCGAAGTCGCGTTGTGACACAGGGTCCTGACTCCTTCGAAACATGTAAC
TCTAGGTGACAACTTCACTCCTTCATTCTTGTTCATGGCATTCGTGTGGG
GGGCTGTCTGTGCCGGAGTGAAACCGGGTCCTGAGTCCGACACGCATATC
TCGCTGGTTTCATCGAGAAGCATTACCTCGCAGGAAGTCACAAATATATG
TTTCGCTGTCTGCTTGGAGGAGTCTGCCTCGTCGAGTGATTCGATAGGCG
TCTAAAGGCAATACTCTGCCTTTTCAGTACCGTAGTGTCACGACACTGTT
AAGAAGAAATGGATGTAAAAGCATAAATGAAACCAATATGGCAATCCAAG
GCAAACTGGTGCATGACATCAAGACCACGGCGAGTCCATCGCGGCCGCCT
CTCTGATCATCTCGTCCAGAATCCGACCGTCCTCCTCGTTGAGATGCCAG
CCGCCTCTACCGGCAGCGTCATCTACTTCGGGCAGGTTGTGTCGATAAGC
GGCGCAAATGAGGTACACGTCTAGCTGGGCCCGACGCCTGTCGTGTATGA
GCTCCTTCGCGCCCCTCTCTCCAAGGGCTAAGTGCTCCTCGGTCAGCTCT
TCTTCTGCTCTAAGCAACTCCGGGTTCATCTGCGAAGCGAGCCATGGGGG
TGACAGAGAGGCGGGCTCTTACGCGTGGAGGTCGGTTCAGTTCAGAGAGT
ATGCCAGCAAAGAAGGCTTTCCACTGCCTTCAGCGCGACATGGATGGCAG
TTGCGCTATGTCTCCCTCGGACGGAGCCTGCAGGAAATGTACGTTCGCGG
ACTATTTTCGGTAGAATTAGGACGCCAGAAACATAACCCAAAAATCGGTG
CGATGCGAGCGGCGAGACATGGTGAGGCAAAGCGGGAGCTGGGAGTTACA
AAACAGGCCTTGAGAGAGTTTCACGATCCGTTCTCCCTATTCCCGGCCAA
CAGAGAACATACCTCGCTCTCACCGCTCATGGATTAAGGTTTCGCGAACA
AAGAGGTTGGAAAGACTCGACACTCCTGATCTCACAAAAACGACTGTTCC
GGTGAATGCATCTGCTACGTACGTTTGGTTGGCGTTTCGTGTGGAAACCC
CACGTTCCAGATCACAACAAACGAAACATGAGCACCACCATGCACCTCGG
GATCGTCGGGAAGGTGCGGGTGGCCTGGTTCGTTGGC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig983:6567..15053-

>mRNA_Ecto-sp13_S_contig983.21476.1 ID=mRNA_Ecto-sp13_S_contig983.21476.1|Name=mRNA_Ecto-sp13_S_contig983.21476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=258bp|location=Sequence derived from alignment at Ecto-sp13_S_contig983:6567..15053- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCAGCTTGCTCGCTTGTCTGGCTGTCTCCAGCAGTCCAGCAGCTTT
ACTACTACCACAACTCTCTTTCTCCGAGACGAGGTCACAGCGCAAGCCCA
GCCAGGCGAGGGGGGCAATGGTTTCCTTGGCATGGCTTTCGCCGCTCTTT
CTCCTGTTCCAGCTAGGCAGAGGCGCTGAAGATCACAACAAACGAAACAT
GAGCACCACCATGCACCTCGGGATCGTCGGGAAGGTGCGGGTGGCCTGGT
TCGTTGGC

mRNA_Ecto-sp13_S_contig983.21476.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

ZOOM

x 1

POSITION

0