Homology
BLAST of mRNA_Ecto-sp13_S_contig9823.21472.1 vs. uniprot
Match:
D7FSM5_ECTSI (Pleckstrin homology (PH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM5_ECTSI)
HSP 1 Score: 228 bits (580), Expect = 4.770e-66
Identity = 144/183 (78.69%), Postives = 153/183 (83.61%), Query Frame = 1
Query: 4 LAQTVASSIAMPGRWSLPNGXXXXXXRLSLAS-HATSGGGSSPRSARSSFTRRAGVQVWVPVHGRTEMHEISLRGLPAGSTSGLFKVQRGGASXXXXXXXXXXXXXASGDTKGGGELPSNGSKKKPLATTFPGARSASARLAPSASRQTTRSPSPGRHHEGEWTGGTVIAASXXXGAARGTDG 549
LAQTVA+S+AMPGRWSLPNGXXXXXX H SSPRSA+SSF+RRAGVQVWVPVHGRTEMHEISLRGLPAGSTSGLFKVQ GGAS XXXXXXXXX ASGDTKGGG+LP NG K+KPLATTFPGARSA+ RLA S SRQTTRSPSPGRH+EG+W GGTVIAA G ARGT G
Sbjct: 438 LAQTVAASMAMPGRWSLPNGXXXXXXXXXXXXXHXXXXXXSSPRSAQSSFSRRAGVQVWVPVHGRTEMHEISLRGLPAGSTSGLFKVQEGGASNXXXXXXXXXKY-ASGDTKGGGDLPPNGPKRKPLATTFPGARSATTRLAASTSRQTTRSPSPGRHYEGDWVGGTVIAAGGGGGTARGTYG 619
BLAST of mRNA_Ecto-sp13_S_contig9823.21472.1 vs. uniprot
Match:
A0A6H5JHX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX3_9PHAE)
HSP 1 Score: 162 bits (409), Expect = 7.370e-44
Identity = 98/116 (84.48%), Postives = 99/116 (85.34%), Query Frame = 1
Query: 202 MHEISLRGLPAGSTSGLFKVQRGGASXXXXXXXXXXXXXASGDTKGGGELPSNGSKKKPLATTFPGARSASARLAPSASRQTTRSPSPGRHHEGEWTGGTVIAASXXXGAARGTDG 549
MHEISLRGLPAGSTSGLFKVQ GGAS XXXXXX ASGDTKGGGELPSNGS KKPLATT PGARSAS RLAPSASRQTTRSPS GRHHEG+W GGTVIAA GAARGTDG
Sbjct: 1 MHEISLRGLPAGSTSGLFKVQEGGASNDDLXXXXXXKH-ASGDTKGGGELPSNGSNKKPLATTLPGARSASTRLAPSASRQTTRSPSLGRHHEGDWVGGTVIAAGGRGGAARGTDG 115
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9823.21472.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 4.77e-66 / Id = 78.69 Expect = 7.37e-44 / Id = 84.48 Sequence D7FSM5_ECTSI A0A6H5JHX3_9PHAE
Match Name E-value Identity Description
D7FSM5_ECTSI 4.770e-66 78.69 Pleckstrin homology (PH) domain-containing protein... [more]
A0A6H5JHX3_9PHAE 7.370e-44 84.48 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Stop 0
Start 1
Seed ortholog score 231.5
Seed ortholog evalue 3.2e-58
Seed eggNOG ortholog 2880.D7FSM5
Model size 550
Hectar predicted targeting category other localisation
Exons 3
EggNOG free text desc. Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
EggNOG OGs COG5422@1,KOG4424@2759
Ec32 ortholog description Dbl homology (DH) domain
Ec32 ortholog Ec-04_000580.1
Cds size 549
COG Functional cat. T
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464245.7960691-CDS-Ecto-sp13_S_contig9823:751..1030 1681464245.7960691-CDS-Ecto-sp13_S_contig9823:751..1030 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9823 752..1030 -
1681464245.816342-CDS-Ecto-sp13_S_contig9823:2188..2287 1681464245.816342-CDS-Ecto-sp13_S_contig9823:2188..2287 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9823 2189..2287 -
1681464245.8291035-CDS-Ecto-sp13_S_contig9823:2844..3015 1681464245.8291035-CDS-Ecto-sp13_S_contig9823:2844..3015 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9823 2845..3015 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9823.21472.1
>prot_Ecto-sp13_S_contig9823.21472.1 ID=prot_Ecto-sp13_S_contig9823.21472.1|Name=mRNA_Ecto-sp13_S_contig9823.21472.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
MLAQTVASSIAMPGRWSLPNGGGGGGGRLSLASHATSGGGSSPRSARSSF TRRAGVQVWVPVHGRTEMHEISLRGLPAGSTSGLFKVQRGGASNDDLNNN DDDDKHASGDTKGGGELPSNGSKKKPLATTFPGARSASARLAPSASRQTT RSPSPGRHHEGEWTGGTVIAASGGGGAARGTDG back to top mRNA from alignment at Ecto-sp13_S_contig9823:752..3015-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9823.21472.1 ID=mRNA_Ecto-sp13_S_contig9823.21472.1|Name=mRNA_Ecto-sp13_S_contig9823.21472.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2264bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9823:752..3015- (Ectocarpus species13 EcNAP12_S_4_19m)ATGCTGGCACAGACGGTGGCCTCTTCAATAGCCATGCCGGGTCGATGGTC
GCTACCGAATGGTGGCGGTGGCGGCGGCGGGAGATTATCCCTGGCGTCTC
ACGCTACTAGCGGTGGTGGCTCGTCTCCTCGGTCGGCGCGGTCTTCCTTT
ACGAGACGGGCTGGTGTTCAG GTGCGGTTGGTTTGAAGATGTCCCTGTTG
TTGCTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTAATGATGCTGCT
GCTGCTGCTGCTGCTGCTACTGCTGCTGTTGTTACTGTTGCTGTTGCTAT
CGTCGTCATTGCTGTCGCGGCCATGCACGGGTGTTTCAGCTTGGCTTGTA
ATAGTACCACATGCGTATTGTCCAGAGCGCGCTGACGAGCTGTCACATTT
TAGTTTCTCGTCGAAGAAGTCGCGAGACACAAGTCCTACCTCTTTCCAAT
CGGCACCTTTCCCCATGTGTTCTGCACGTTTTCGACAATGTTGGTCCCTC
ACGTGGTAAGCGGACGGTTGCGTTTGTCAACCGCAGAACGAAAAGACTAC
CGGTGCATAGCGATATCTGTCTACTGTTTTCACCCGTGCATGTTTTCGAT
ATTGTTGGTTCCTCGCGTGGTAAGCTATCGGTTGTATTGAACCAGTTTAC
CGTAGAACGAAGATACAACCACACTATGTACTACCGGTGCATGTCGATAA
CTGCTGTCTCCTGTGTGCACTTGTGTAGGTGTGGGTGCCGGTACACGGGC
GTACAGAGATGCATGAGATCTCCTTGCGAGGCCTCCCCGCCGGTTCCACA
TCGGGCCTCTTCAAGGTCCAGAGAGGG GTGAGACCCGTGCCGGGGCCCCG
TGATTTATTATTTTCTCTGTGCGGACTACCCGTACAACATGTTGGTTTTA
GTATACTCGTGTTGGGAAAGGTCCCCTCTTGTTCAACCTCTGATTGTTGT
ATGTTGTTGCTGATTATATCGTGGCAAAACACGAAAGAGATGGCATAATT
TTATCGTCGCCAAGAGGTCATGATATGTCTTCATGGACTCCAGCTGACAC
CTGAGCTCCGACTGTGGACGGCTTGCGTCACGGGTTCCCACAGCTTTGTG
GTAGTCCGTTACCGAGAGCACATCGGTTATGTTTTCGTCGCGATATTTGA
GCTAAACCCTGACCCTATCCCTAACCCCATCCCTACCGAGGAGACGGCCG
AGAATAGAACAAGCGAGGCCTCACCTGGAGAGGATTCCCCTGCCTATGCC
AGATTGTTGCGCATGGAAGAGTTATGCTTCCATCAAAAGCAGGTCTCCTG
ATTTCCAAAAGGGTCCCGAAATCTTCCAACTAATGTCCTTCCCGGCTTTC
GCGTGCGTGCGCTTGGACTCTGCCCTTCCGACACAACTTTTTGTCGTCTG
CACATCATCCACAATTTTGTCACCTGTTGTTCGTGCAGCAACGTCAGTTG
CAACGTTTTCGGTGTCCGCCCAGACGGCTTTGTGGACTGTATGTTCTTTG
TTTTAATAGTACCGTCGAGGTCTGGCAAGAAGCGACGATCGCTGTCCATT
CTCACGTTCTTGTTTGACTCTGCTCGCGTGTTGCCTTGAAAATACGTGTG
TTCCCCCTGAAAGAAGAGGGCGTATGTAGAAAATGCTGGATATGTTGTGA
ACGTCCTTTACTACAACGTGGGGGCGAAGTTCGCTGAAAGTCCTCGACGA
AAACGCACAACACCCACAAAACATTCGACGGGCGGGCTCCCTCTCTTGCG
ATAGGGCTCCTCCTCGCGAAGTTCCCCCTCCTTGCGATAACGCTTCTTTG
TCTTGCGATGCAGCTGTTTCTGCTTGCGCTGAGACCCCTTCTTTGCGGTA
CGGTCTTCCTCTTCCGACAAGCCAACTCTGGAGGAATGAGAGCGTTGCTG
CTGTTGTTGACCGTCGTTGCTGCTATTCTGAGTTCTACACCCTACACACC
TCTCCCGCGCTTGCTTCCGTTTTTTTCCACTGGAGGGGGCAAGTAACGAC
GACCTCAACAACAACGACGACGACGACAAACACGCCTCCGGTGACACCAA
AGGTGGCGGCGAGCTGCCCTCCAACGGCTCCAAGAAGAAGCCGTTAGCAA
CGACCTTCCCGGGTGCGAGGAGCGCAAGCGCAAGACTAGCCCCGTCCGCC
AGTCGGCAAACGACCAGATCACCTTCTCCCGGACGCCACCACGAGGGGGA
GTGGACAGGGGGCACCGTGATAGCGGCTAGTGGGGGGGGCGGGGCTGCCC
GCGGCACAGATGGA back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9823:752..3015-
>mRNA_Ecto-sp13_S_contig9823.21472.1 ID=mRNA_Ecto-sp13_S_contig9823.21472.1|Name=mRNA_Ecto-sp13_S_contig9823.21472.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9823:752..3015- (Ectocarpus species13 EcNAP12_S_4_19m) ATGCTGGCACAGACGGTGGCCTCTTCAATAGCCATGCCGGGTCGATGGTC GCTACCGAATGGTGGCGGTGGCGGCGGCGGGAGATTATCCCTGGCGTCTC ACGCTACTAGCGGTGGTGGCTCGTCTCCTCGGTCGGCGCGGTCTTCCTTT ACGAGACGGGCTGGTGTTCAGGTGTGGGTGCCGGTACACGGGCGTACAGA GATGCATGAGATCTCCTTGCGAGGCCTCCCCGCCGGTTCCACATCGGGCC TCTTCAAGGTCCAGAGAGGGGGGGCAAGTAACGACGACCTCAACAACAAC GACGACGACGACAAACACGCCTCCGGTGACACCAAAGGTGGCGGCGAGCT GCCCTCCAACGGCTCCAAGAAGAAGCCGTTAGCAACGACCTTCCCGGGTG CGAGGAGCGCAAGCGCAAGACTAGCCCCGTCCGCCAGTCGGCAAACGACC AGATCACCTTCTCCCGGACGCCACCACGAGGGGGAGTGGACAGGGGGCAC CGTGATAGCGGCTAGTGGGGGGGGCGGGGCTGCCCGCGGCACAGATGGA back to top