mRNA_Ecto-sp13_S_contig9814.21468.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: D8LDP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP5_ECTSI) HSP 1 Score: 585 bits (1508), Expect = 3.160e-203 Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV 897 F DMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV Sbjct: 29 FSDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV 327
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: A0A6H5JUP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUP0_9PHAE) HSP 1 Score: 585 bits (1508), Expect = 8.950e-199 Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV 897 F DMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV Sbjct: 389 FSDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV 687
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: A0A835YLF5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF5_9STRA) HSP 1 Score: 382 bits (980), Expect = 4.060e-125 Identity = 198/299 (66.22%), Postives = 232/299 (77.59%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV 897 F D + +A+ S LLTR+RA D+ V LS +D + WLR K KV +V QAV+VM LYA+RA R PC PDGP+ FC F H PT DQ RC+ EIE DM+WR+ PMDRLLCGDVGFGKTEVA+RA++R VR+ +QVALLAPTTILAAQHYRTLL R+P+D+ V LLRGGN+ +R IK + TV VVVGTH+LL RKVEF LGLLV+DEEQKFGV+QKE+LK L TGVDVLTLTATPIPRTLHMSL+GIRDLS I SPP R NVTTYIMK TDE++QRA+ RE+ R GQV Sbjct: 53 FADGVVEVARIDSRLLTRFRAGDSRGVKLSRYADASRWLRAKEKVATKVRAQAVDVMALYARRAGTARAPCAPDGPDYAAFCARFPHAPTPDQARCMEEIEQDMVWRQRPMDRLLCGDVGFGKTEVAMRAIYRAVRNGRQVALLAPTTILAAQHYRTLLARLPSDMRVELLRGGNTRDARDIKVRMAEGTVDVVVGTHTLLGRKVEFSGLGLLVVDEEQKFGVHQKERLKALATGVDVLTLTATPIPRTLHMSLSGIRDLSIIQSPPEGRLNVTTYIMKSTDEVIQRAVARELRRKGQV 351
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: A0A7S3XMP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMP5_HETAK) HSP 1 Score: 287 bits (735), Expect = 1.570e-87 Identity = 156/301 (51.83%), Postives = 203/301 (67.44%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAA--RVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV 897 F D + + Q+ LLTRY++ + A L+ + + W K + K A ++M LYA R R+PC PDG EM F GF QPT DQ + DM+WRK PMDRL+CGDVGFGKTEVA+RA++R VR+ +QVALLAPTT+LAAQH RTL +RMP DV V LRGGN+ +R KE + + VVVGTH+LL KV F LGL+V+DEEQ+FGV QKEKLK + VDVLTL+ATPIPRTL MSL+G+RD+S+I++ P RQNV+T + + E+++ A+ E+ R GQV Sbjct: 160 FADQQVTLPLGQAELLTRYKSREQAGENPKLAKFTGRRGWSTKLQKAKLHTDKLAKDIMMLYADRDGRYREPCLPDGEEMWAFEAGFHFQPTPDQRTAFEAVMKDMVWRKRPMDRLICGDVGFGKTEVAMRAIYRAVRNGRQVALLAPTTVLAAQHLRTLRRRMP-DVAVECLRGGNTRENRRTKERLAAGELEVVVGTHALLGNKVAFQRLGLVVVDEEQRFGVAQKEKLKAASADVDVLTLSATPIPRTLQMSLSGLRDMSSIYTAPEGRQNVSTTVARMGQEVIREAIQYELDRDGQV 459
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: B7GBS8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GBS8_PHATC) HSP 1 Score: 288 bits (738), Expect = 4.610e-87 Identity = 154/307 (50.16%), Postives = 217/307 (70.68%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVP-LSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEM-DEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPA----DVNVALLRGG---NSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQ 894 + D + + D++Y L+RYRA DA P LS V + +W + K KV+E + A +V+ LYA R ++R P P ++ EF K F ++PT DQ +C EIENDM+WR PMDRL+CGDVGFGKTEVA+RA+FR + + +Q ALLAPT +LAAQHY+ ++KRM ++N+ALLRGG + R ++ I +++VGTH+LLS +++F NLGLLV+DEEQ+FGV QKE+LK++ G+DVLTL+ATPIPRTL MSL+GIRD STI SPP R+ T++ +++IV+ A++ E++RGGQ Sbjct: 183 YADAVVHVPVDRAYRLSRYRAGDAVVKPKLSRVKGE-AWSKAKQKVEENTLQLAQDVLALYATRETLQRQPFDPSVEDVVQEFSKSFLYEPTTDQKKCFEEIENDMVWRSRPMDRLICGDVGFGKTEVAIRALFRSIINGRQAALLAPTGVLAAQHYKNIVKRMGPGTEYNINIALLRGGMGKQTKAGRELRGEIEGGKTQLIVGTHALLSNEMKFKNLGLLVVDEEQRFGVKQKERLKLICDGIDVLTLSATPIPRTLQMSLSGIRDTSTIRSPPPMRKPTVTHVQDFSEDIVKTAISTELARGGQ 488
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: A0A7S2RFB6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFB6_9STRA) HSP 1 Score: 289 bits (740), Expect = 1.400e-86 Identity = 156/306 (50.98%), Postives = 214/306 (69.93%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGP-EMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVN----VALLRGG---NSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQ 894 + D + + D++Y L+RYRA D+A P +W + K +V+E + A +V+ LYA R ++R P P + +F K F ++PT DQ+ C ENDM+WR+ PMDRL+CGDVGFGKTEVALRA+FR V + +Q ALL+PT +LAAQH++ + +RM + N VALLRGG N+ R ++E I + V++VVGTH+LLSR +EF +LGLLV+DEEQ+FGV QKE+LK++ GVDVLTL+ATPIPRTL MSL+GIRD STI SPP R TY+ + ++E+V+ A+ REM+RGGQ Sbjct: 306 YADATVHVPIDKAYRLSRYRAGDSAVKPRLSRCKGEAWRKAKNRVEEDTIQMAEDVLALYATRETLQRSPYDPTKEVHVRDFEKTFPYEPTPDQITCFEATENDMVWRRRPMDRLVCGDVGFGKTEVALRALFRCVANGRQAALLSPTGVLAAQHFKNVQQRMGDESNFNTTVALLRGGMGMNTKAGRELRERISSGEVQLVVGTHALLSRNLEFKDLGLLVVDEEQRFGVKQKERLKLICNGVDVLTLSATPIPRTLQMSLSGIRDTSTIRSPPPMRLPTMTYVQEFSEELVRDAINREMARGGQ 611
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: A0A7S4AXJ3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AXJ3_9STRA) HSP 1 Score: 286 bits (731), Expect = 5.330e-85 Identity = 150/307 (48.86%), Postives = 214/307 (69.71%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGP-EMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPAD----VNVALLRGGNSMGSRGIKEA---IRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV 897 + D + + D++Y L+RYRA DAA P + W + KV+ + A +V+ LYA R ++R P PD ++ EF K F ++PTKDQ +C ++ENDM+WR PMDRL+CGDVGFGKTEVALRA++R V + +Q A+LAPT +LA+QH++ +LKR+ + +++ALLRGG S S+ KE I+N ++VGTH+LLS +EF +LGLLV+DEEQ+FGV QKE+LK++ G+DVLTL+ATPIPRTL MSL+GIRD STI SPP R++ T++ ++V+ A+ +E+ RGGQ+ Sbjct: 372 YADGIVHVPVDRAYRLSRYRAGDAAVKPRLSKVRGDQWRNARRKVEASTLELAQDVLALYATRETLQRPPFNPDNEYKVKEFEKTFTYEPTKDQAKCFEDVENDMVWRPRPMDRLICGDVGFGKTEVALRALYRSVANGRQAAMLAPTGVLASQHFKNILKRVGEESEFKLSIALLRGGMSPKSKAGKEMRSKIKNGEYDIIVGTHALLSNSMEFKDLGLLVVDEEQRFGVKQKERLKLICNGIDVLTLSATPIPRTLQMSLSGIRDTSTIRSPPPMRKSTKTFVQSYNKDLVKHAIGQELGRGGQI 678
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: A0A1E7FE91_9STRA (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE91_9STRA) HSP 1 Score: 275 bits (702), Expect = 5.700e-85 Identity = 146/306 (47.71%), Postives = 207/306 (67.65%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGP-EMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPAD----VNVALLRGG---NSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQ 894 + D + + D++Y L+RYRA DAA P + W + KV+ + A +V+ LYA R ++R P PD ++ EF K F +PT DQ +C ++ENDM+WR PMDRL+CGDVGFGKTEVA+RA+FR V + +Q A+LAPT +LA+QH++ + KR+ D V LLRGG N+ R I+ I + +++GTH+LLS+ ++F +LGLLV+DEEQ+FGV QKE+LK++ GVDVLTL+ATPIPRTL MSL+GIRD STI +PP R+ TY+ E++++A+ +E+ RGGQ Sbjct: 5 YADGIVHVPVDRAYRLSRYRAGDAAVKPRLSKVRGDQWRNARKKVEASTLELAQDVLALYATRETLQRQPFDPDNEGKVKEFEKTFRFEPTSDQNKCFEDVENDMVWRSRPMDRLICGDVGFGKTEVAIRALFRTVTNGRQSAMLAPTGVLASQHFKNICKRVGEDSEYGFRVGLLRGGMTANTKVGREIRGKIEDGHFDIIIGTHALLSKSLKFKDLGLLVVDEEQRFGVKQKERLKLICEGVDVLTLSATPIPRTLQMSLSGIRDTSTIRTPPPMRKATKTYVQSFDKEVIKKAIGKELERGGQ 310
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: A0A448ZCY1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCY1_9STRA) HSP 1 Score: 283 bits (724), Expect = 2.220e-84 Identity = 149/307 (48.53%), Postives = 209/307 (68.08%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGP-EMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPAD----VNVALLRGG---NSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQV 897 + D + + D++Y L+RYRA DAA P + W + KV+ + A +V+ LYA R ++R P PD + +F K F +PTKDQ +C E+ENDM+WR PMDRL+CGDVGFGKTEVALRA+FR V + +Q A+LAPT +LA+QHY+ +L R D +N+AL+RGG S + ++E I+N ++VGTH+LLS ++F +LGLLV+DEEQ+FGV QKE+LK++ G+DVLTL+ATPIPRTL MSL+GIRD STI SPP R++ T++ +IV+ A+ +E+ R GQ+ Sbjct: 288 YADGIVHVPVDRAYRLSRYRAGDAAVKPRLSKVRGDQWRNARRKVEASTMELAQDVLALYATRETLQRQPFDPDKETRVKDFEKTFKFEPTKDQAKCFEEVENDMVWRSRPMDRLICGDVGFGKTEVALRALFRAVANGRQAAMLAPTGVLASQHYKNILXRCGEDSEFNLNIALVRGGMAPKSKAGKEMREKIQNGEYDIIVGTHALLSNSMKFKDLGLLVVDEEQRFGVKQKERLKLICDGIDVLTLSATPIPRTLQMSLSGIRDTSTIRSPPPMRKSTKTFVQSFNKDIVKHAIAQELERNGQI 594
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Match: A0A1Z5K3S5_FISSO (Transcription-repair coupling factor n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3S5_FISSO) HSP 1 Score: 283 bits (724), Expect = 2.730e-84 Identity = 152/304 (50.00%), Postives = 217/304 (71.38%), Query Frame = 1 Query: 1 FQDMNLPIAKDQSYLLTRYRAADAARVP-LSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPE-MDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPA-DVNVALLRGGNSMGSR---GIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQ 894 + D + + +++Y ++RYRA DA P LS V + +W + K +V++ + A +V+ LYA R ++R P P + + +F K F +PT DQ +C +IENDM+W+ PMDRL+CGDVGFGKTEVA RA+FR V + KQ A LAPT +LAAQHY+ +++RM DVN++LLRGG + +R I+E I + ++++VGTH+LLS ++F NLGLLV+DEEQ+FGV QKE+LK++++G+DVLTLTATPIPRTL MSL+GIRD STI SPP R++ TY+ ++E+V A+ E+ RGGQ Sbjct: 324 YADSIVHVPVERAYRISRYRAGDAVVKPKLSRVRGE-AWAKAKRRVEDNTLEIAQDVLALYATREMLQRPPFDPLLEDTVKQFEKTFPFEPTTDQKKCFEDIENDMVWKSRPMDRLVCGDVGFGKTEVAFRALFRTVVNGKQAAFLAPTGVLAAQHYKNIVQRMAGFDVNISLLRGGMTRTTRVGREIREEIESGKIQLIVGTHALLSNDLKFKNLGLLVVDEEQRFGVKQKERLKLISSGIDVLTLTATPIPRTLQMSLSGIRDTSTIRSPPPMRKSTITYVQDFSEEMVANAIQTELDRGGQ 626 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9814.21468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9814.21468.1 >prot_Ecto-sp13_S_contig9814.21468.1 ID=prot_Ecto-sp13_S_contig9814.21468.1|Name=mRNA_Ecto-sp13_S_contig9814.21468.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp MNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAback to top mRNA from alignment at Ecto-sp13_S_contig9814:215..5823- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9814.21468.1 ID=mRNA_Ecto-sp13_S_contig9814.21468.1|Name=mRNA_Ecto-sp13_S_contig9814.21468.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9814:215..5823- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9814:215..5823- >mRNA_Ecto-sp13_S_contig9814.21468.1 ID=mRNA_Ecto-sp13_S_contig9814.21468.1|Name=mRNA_Ecto-sp13_S_contig9814.21468.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=888bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9814:215..5823- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |