mRNA_Ecto-sp13_S_contig9813.21467.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: A0A6H5JD34_9PHAE (AAA domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5JD34_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 7.760e-144 Identity = 215/218 (98.62%), Postives = 215/218 (98.62%), Query Frame = 1 Query: 1 MAAASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 MAAASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLG PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE Sbjct: 25 MAAASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLG---PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 239
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: A0A7S2XYY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYY8_9STRA) HSP 1 Score: 389 bits (998), Expect = 1.000e-134 Identity = 193/211 (91.47%), Postives = 205/211 (97.16%), Query Frame = 1 Query: 22 RDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 +D G+HSYYQ K+DE+E+VVR++T NL+RLKAQRNELNAKVRLLREELHHLQE GSYVGEVVK MGKKKVLVKV PEGKYVVD+DKDID+NKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDS+YDMIGGL+KQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE Sbjct: 36 KDAGIHSYYQSKLDELEIVVREKTNNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKKVLVKVPPEGKYVVDLDKDIDMNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSSYDMIGGLDKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 246
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: A0A4D9CPY1_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPY1_9STRA) HSP 1 Score: 384 bits (985), Expect = 4.520e-131 Identity = 191/212 (90.09%), Postives = 202/212 (95.28%), Query Frame = 1 Query: 19 GRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 G D GV SYY KIDE+E+VVR+RTQNL+RLKAQRNE NAKVRLLREELHHLQE GSYVGEVVKAMGK KVLVKVNPEGKYVVD+DKD+D+NKCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGL+KQ+REIKEVIELPIKHPELFE+LGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG+ELVQKYIGE Sbjct: 18 GEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDINKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGE 229
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: A0A6V1RDP8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDP8_HETAK) HSP 1 Score: 381 bits (978), Expect = 5.970e-130 Identity = 187/218 (85.78%), Postives = 205/218 (94.04%), Query Frame = 1 Query: 1 MAAASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 M ++G+ +YYQ KIDE+E+ +R++T NL+RL+AQRNELNAKVRLLREEL+HLQE GSYVGEVVKAMGK KVLVKVNPEGKYVVDIDKDID+NKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDM+GGL+KQIREIKEVIELPIKHPELF+SLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTF+RVSG+ELVQKYIGE Sbjct: 15 MEVDGEKEEVGIQTYYQSKIDELEITIREKTNNLQRLQAQRNELNAKVRLLREELYHLQEPGSYVGEVVKAMGKDKVLVKVNPEGKYVVDIDKDIDINKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMVGGLDKQIREIKEVIELPIKHPELFDSLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFVRVSGAELVQKYIGE 232
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: A0A7S2W1P0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1P0_9STRA) HSP 1 Score: 380 bits (975), Expect = 1.110e-129 Identity = 189/213 (88.73%), Postives = 201/213 (94.37%), Query Frame = 1 Query: 16 SGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 +G G+ SYYQ KIDE+EL+VRD+ +NL RL AQRNELNA+VRLLREELHHLQE GSYVGEVVKAMGK KVLVKVNPEGKYVVD+DKDID+NKC PNTRVALRNDSY LHKILPTKVDPLVSLMKVEKVPDSTYDM+GGL+KQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG+ELVQKYIGE Sbjct: 8 AGEAAGLQSYYQSKIDELELIVRDKAKNLARLTAQRNELNARVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDIDINKCLPNTRVALRNDSYALHKILPTKVDPLVSLMKVEKVPDSTYDMVGGLDKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGE 220
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: H3G4Y1_PHYRM (AAA domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=H3G4Y1_PHYRM) HSP 1 Score: 365 bits (938), Expect = 3.000e-125 Identity = 185/218 (84.86%), Postives = 199/218 (91.28%), Query Frame = 1 Query: 1 MAAASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 +A S+ G+ SYY+ KI+ +EL VRD TQNL RL+AQRNELN+KVRLLREEL LQE GSYVGEVVK MGK KVLVKVNPEGKYVVD+DK ID+ KCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGL+KQIREIKEVIELPIKHPELF++LGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG+ELVQKYIGE Sbjct: 4 VAMTSADDSAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDITKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGE 221
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: K3WH84_GLOUD (AAA domain-containing protein n=11 Tax=Oomycota TaxID=4762 RepID=K3WH84_GLOUD) HSP 1 Score: 366 bits (940), Expect = 2.430e-124 Identity = 186/216 (86.11%), Postives = 199/216 (92.13%), Query Frame = 1 Query: 7 AASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 A S + G+ SYYQ KI+ +EL VRD+TQNL RL+AQRNELN+KVRLLREEL LQE GSYVGEVVK MGK KVLVKVNPEGKYVVD+DK ID+ KC+PNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGL+KQIREIKEVIELPIKHPELFE+LGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG+ELVQKYIGE Sbjct: 8 AKSGSANAGLTSYYQQKIEHLELTVRDKTQNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKTKVLVKVNPEGKYVVDVDKAIDITKCSPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGE 223
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: A0A7R9UFA4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFA4_9STRA) HSP 1 Score: 363 bits (933), Expect = 2.900e-123 Identity = 180/209 (86.12%), Postives = 197/209 (94.26%), Query Frame = 1 Query: 28 LGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 LG+ SYYQ +IDE+E++VR++T+NL RLKAQRNELNAKVR LR+EL+HLQE GSYVGEVVK MG+ KVLVKVNP+GKYVVD+DKDID+ CT TRVALRNDSY +HKILPTK+DPLVSLMKVEKVPDSTYDMIGGL+KQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE Sbjct: 15 LGIESYYQSRIDELEILVREKTKNLRRLKAQRNELNAKVRQLRDELYHLQEPGSYVGEVVKQMGRGKVLVKVNPDGKYVVDVDKDIDIKLCTSTTRVALRNDSYQIHKILPTKIDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 223
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: A0A3R6Y5U9_9STRA (AAA domain-containing protein n=13 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6Y5U9_9STRA) HSP 1 Score: 361 bits (926), Expect = 2.580e-122 Identity = 184/218 (84.40%), Postives = 198/218 (90.83%), Query Frame = 1 Query: 1 MAAASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 M + G + G+ SYY+ KI+ +EL VRD+T NL RL+AQRNELN+KVRLLREEL LQE GSYVGEVVK MGK KVLVKVNPEGKYVVD+DK ID+ KCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGL+KQIREIKEVIELPIKHPELF +LGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG+ELVQKYIGE Sbjct: 1 MTGITDGSE-GLTSYYRQKIEHLELTVRDKTMNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKAIDITKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFNALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGE 217
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Match: A0A7S2CFJ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CFJ7_9STRA) HSP 1 Score: 361 bits (926), Expect = 4.960e-122 Identity = 178/211 (84.36%), Postives = 198/211 (93.84%), Query Frame = 1 Query: 22 RDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 654 +++G++S+YQ KIDE+E+V R++ QNL R+ AQRNELNA+VRLLREELH+LQE GSYVGEVVK MGK K+LVKVNPEGKYVVD+ ID+ KCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVEKVPDSTYDM+GGL+KQIREIKEVIELPIKHPELF+SLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG+ELVQKYIGE Sbjct: 25 KEIGLNSFYQSKIDELEIVAREKVQNLARITAQRNELNARVRLLREELHYLQEPGSYVGEVVKPMGKTKILVKVNPEGKYVVDLGAGIDMAKCTPNTRVALRNDSYSLHKILPTKVDPLVSLMKVEKVPDSTYDMVGGLDKQIREIKEVIELPIKHPELFDSLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGE 235 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9813.21467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9813.21467.1 >prot_Ecto-sp13_S_contig9813.21467.1 ID=prot_Ecto-sp13_S_contig9813.21467.1|Name=mRNA_Ecto-sp13_S_contig9813.21467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=218bp MAAASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLback to top mRNA from alignment at Ecto-sp13_S_contig9813:347..2980- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9813.21467.1 ID=mRNA_Ecto-sp13_S_contig9813.21467.1|Name=mRNA_Ecto-sp13_S_contig9813.21467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2634bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9813:347..2980- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9813:347..2980- >mRNA_Ecto-sp13_S_contig9813.21467.1 ID=mRNA_Ecto-sp13_S_contig9813.21467.1|Name=mRNA_Ecto-sp13_S_contig9813.21467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=654bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9813:347..2980- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |