mRNA_Ecto-sp13_S_contig98124.21466.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig98124.21466.1
Unique NamemRNA_Ecto-sp13_S_contig98124.21466.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: D7G8S6_ECTSI (GTP:AMP phosphotransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8S6_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.550e-29
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGS+ GKTAKEFMD GKFVPD+IIFEVL
Sbjct:   46 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSETGKTAKEFMDQGKFVPDEIIFEVL 104
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: A0A7S3RCE7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RCE7_9SPIT)

HSP 1 Score: 78.2 bits (191), Expect = 3.560e-17
Identity = 32/59 (54.24%), Postives = 51/59 (86.44%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            G GKGT+S K+++DF+F HISTGD+LR +++AG+++G TAK++MD G+ VPDQ+I +++
Sbjct:   33 GGGKGTLSKKLIKDFNFHHISTGDMLRAQVRAGTELGATAKKYMDSGELVPDQLIVDMV 91
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: A0A7R9ZVV1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7R9ZVV1_9DINO)

HSP 1 Score: 75.1 bits (183), Expect = 3.150e-16
Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            G GKGTIS K+++DF F HISTGD+LR +++ GS +GK AKE+MD G  VPD +I +++
Sbjct:   28 GGGKGTISKKLIKDFDFHHISTGDMLRAQVRLGSALGKKAKEYMDAGNLVPDSLIIDMV 86
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: A0A2G9M6G4_9ARCH (Adenylate kinase n=1 Tax=Candidatus Woesearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_45_16 TaxID=1974465 RepID=A0A2G9M6G4_9ARCH)

HSP 1 Score: 75.1 bits (183), Expect = 2.780e-15
Identity = 29/59 (49.15%), Postives = 49/59 (83.05%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            GSGKGT++ ++++D+ F H+STG++LR+EI  G+++GK AK  MD GK+VPD+++ E++
Sbjct:   10 GSGKGTMADRLVKDYGFVHLSTGNILREEISKGTEIGKKAKSLMDAGKYVPDEVVIEIV 68
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: L1MCI4_9BACT (Adenylate kinase n=3 Tax=Alloprevotella TaxID=1283313 RepID=L1MCI4_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 4.650e-15
Identity = 32/59 (54.24%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            GSGKGT S  ++  + F HISTGD+LR EI+AGSD+G+TAKE++D+G+ +PD ++ ++L
Sbjct:   11 GSGKGTQSDILVEKYGFDHISTGDVLRSEIKAGSDLGRTAKEYIDNGQLIPDSLMIDIL 69
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: E7RQK3_9BACT (Adenylate kinase n=2 Tax=Prevotella oralis TaxID=28134 RepID=E7RQK3_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 4.740e-15
Identity = 31/59 (52.54%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            GSGKGT S K++  + F HISTGD+LR EI+ G+++GKTAK+F+D G+ +PD+++ ++L
Sbjct:   11 GSGKGTQSDKMIEKYGFGHISTGDVLRSEIKNGTELGKTAKDFIDKGQLIPDELMIDIL 69
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: A0A1G7VMB2_9BACT (Adenylate kinase n=1 Tax=Bacteroidales bacterium KHT7 TaxID=1855373 RepID=A0A1G7VMB2_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 6.680e-15
Identity = 32/59 (54.24%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            GSGKGT S KI+  + F HISTGD+LR EI+ G+++GKTAKE++D+G+ +PD ++ ++L
Sbjct:   11 GSGKGTQSDKIVEKYGFKHISTGDVLRGEIKNGTELGKTAKEYIDNGQLIPDALMIDIL 69
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: B7G252_PHATC (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G252_PHATC)

HSP 1 Score: 74.3 bits (181), Expect = 6.940e-15
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDF-HFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            G GKGTISGKIL+DF  F H+STGDLLR  +  G+ +GK AK FM+ GK VPD ++  +L
Sbjct:    8 GGGKGTISGKILKDFPRFHHVSTGDLLRQHVNEGTQLGKEAKSFMESGKLVPDSLMINLL 67
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: D3ICF3_9BACT (Adenylate kinase n=3 Tax=Prevotella TaxID=838 RepID=D3ICF3_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 9.410e-15
Identity = 31/59 (52.54%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            GSGKGT S K++  + F HISTGD+LR EI+ G+++GKTAKE++D G+ +PD+++ ++L
Sbjct:   11 GSGKGTQSDKLIAKYGFEHISTGDVLRSEIKNGTELGKTAKEYIDKGQLIPDELMVDIL 69
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BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Match: UPI000237D5B3 (adenylate kinase n=2 Tax=Anaerophaga thermohalophila TaxID=177400 RepID=UPI000237D5B3)

HSP 1 Score: 73.6 bits (179), Expect = 9.410e-15
Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:    1 GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFVPDQIIFEVL 177
            GSGKGT S K++  + FAHISTGD+LR+EI+A +D+GKTAK F+D G+ VPD  I  +L
Sbjct:   11 GSGKGTQSEKMIEKYGFAHISTGDILRNEIKAETDLGKTAKSFIDKGELVPDDTIIGML 69
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98124.21466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8S6_ECTSI1.550e-2993.22GTP:AMP phosphotransferase, mitochondrial n=2 Tax=... [more]
A0A7S3RCE7_9SPIT3.560e-1754.24Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7R9ZVV1_9DINO3.150e-1655.93Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A2G9M6G4_9ARCH2.780e-1549.15Adenylate kinase n=1 Tax=Candidatus Woesearchaeota... [more]
L1MCI4_9BACT4.650e-1554.24Adenylate kinase n=3 Tax=Alloprevotella TaxID=1283... [more]
E7RQK3_9BACT4.740e-1552.54Adenylate kinase n=2 Tax=Prevotella oralis TaxID=2... [more]
A0A1G7VMB2_9BACT6.680e-1554.24Adenylate kinase n=1 Tax=Bacteroidales bacterium K... [more]
B7G252_PHATC6.940e-1558.33GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... [more]
D3ICF3_9BACT9.410e-1552.54Adenylate kinase n=3 Tax=Prevotella TaxID=838 RepI... [more]
UPI000237D5B39.410e-1559.32adenylate kinase n=2 Tax=Anaerophaga thermohalophi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig98124contigEcto-sp13_S_contig98124:341..517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score112.8
Seed ortholog evalue5.3e-23
Seed eggNOG ortholog2880.D7G8S6
Preferred nameAK3
Model size177
KEGG rclassRC00002
KEGG koko:K00939,ko:K00944
KEGG ReactionR00127,R00157,R00333,R01547,R11319
KEGG Pathwayko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130
KEGG ModuleM00049
Hectar predicted targeting categoryother localisation
GOsGO:0001889,GO:0003674,GO:0003824,GO:0004017,GO:0004550,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005759,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006172,GO:0006213,GO:0006220,GO:0006725,GO:0006753,GO:0006754,GO:0006756,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007517,GO:0007596,GO:0007599,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009150,GO:0009151,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009199,GO:0009200,GO:0009201,GO:0009205,GO:0009206,GO:0009208,GO:0009215,GO:0009218,GO:0009259,GO:0009260,GO:0009262,GO:0009394,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009611,GO:0009941,GO:0009987,GO:0009991,GO:0015949,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0021537,GO:0021549,GO:0021772,GO:0021988,GO:0022037,GO:0022607,GO:0030900,GO:0030902,GO:0031667,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0034357,GO:0034641,GO:0034654,GO:0042060,GO:0042221,GO:0042278,GO:0042493,GO:0042592,GO:0042594,GO:0042651,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046031,GO:0046033,GO:0046034,GO:0046039,GO:0046041,GO:0046051,GO:0046060,GO:0046128,GO:0046131,GO:0046390,GO:0046483,GO:0046899,GO:0046939,GO:0046940,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0048871,GO:0050145,GO:0050817,GO:0050878,GO:0050896,GO:0051259,GO:0051260,GO:0055035,GO:0055086,GO:0060322,GO:0061008,GO:0061061,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0072527,GO:0090407,GO:0097009,GO:1901068,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657
Exons1
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG0563@1,KOG3078@2759
EC2.7.4.10,2.7.4.3
Cds size177
COG Functional cat.F
BiGG ReactioniRC1080.CRv4_Au5_s12_g2970_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464245.1378174-CDS-Ecto-sp13_S_contig98124:340..5171681464245.1378174-CDS-Ecto-sp13_S_contig98124:340..517Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98124 341..517 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig98124.21466.1prot_Ecto-sp13_S_contig98124.21466.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig98124 341..517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig98124.21466.1

>prot_Ecto-sp13_S_contig98124.21466.1 ID=prot_Ecto-sp13_S_contig98124.21466.1|Name=mRNA_Ecto-sp13_S_contig98124.21466.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
GSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSDMGKTAKEFMDHGKFV
PDQIIFEVL
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mRNA from alignment at Ecto-sp13_S_contig98124:341..517+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig98124.21466.1 ID=mRNA_Ecto-sp13_S_contig98124.21466.1|Name=mRNA_Ecto-sp13_S_contig98124.21466.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98124:341..517+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGGAGTGGAAAGGGCACGATATCGGGGAAGATCTTGCGAGACTTCCACTT
CGCCCACATTAGCACGGGAGACCTGCTTCGCGATGAGATCCAGGCCGGCT
CGGACATGGGCAAGACGGCCAAGGAATTCATGGACCACGGGAAGTTCGTC
CCTGATCAGATCATTTTCGAGGTGCTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig98124:341..517+

>mRNA_Ecto-sp13_S_contig98124.21466.1 ID=mRNA_Ecto-sp13_S_contig98124.21466.1|Name=mRNA_Ecto-sp13_S_contig98124.21466.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98124:341..517+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGGAGTGGAAAGGGCACGATATCGGGGAAGATCTTGCGAGACTTCCACTT
CGCCCACATTAGCACGGGAGACCTGCTTCGCGATGAGATCCAGGCCGGCT
CGGACATGGGCAAGACGGCCAAGGAATTCATGGACCACGGGAAGTTCGTC
CCTGATCAGATCATTTTCGAGGTGCTC
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