mRNA_Ecto-sp13_S_contig98.21454.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: D7FKW2_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW2_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 6.170e-133 Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST 582 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNF QGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST Sbjct: 1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST 194
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: A0A7S2XZV1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV1_9STRA) HSP 1 Score: 226 bits (575), Expect = 3.920e-68 Identity = 103/194 (53.09%), Postives = 143/194 (73.71%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTL--GGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENE 576 MNFG + K+LL ELKRS+WLP YNE V+ +L EI + EL T G R ++IPD KV +VVHHQAL+RNKR LL Y +R +++ LRWETGPVVP+ LQ +LS E E F+ YD +++ + +G+ +DLT D QPPKEL +EVR L DCGEIMT+ G++ L++G+THLLRR D E+L++QG+L+++ ++ Sbjct: 1 MNFGGRGKELLQELKRSEWLPNYNEKTVKDILKEIDLYWQELCATFDNGNRGNNEIPDAAKVGIVVHHQALMRNKRILLAYHMYRLEKLKALRWETGPVVPEHLQGALSGSEREFFSRYDSLVSGYCEGVGIDLTQDQQPPKELFIEVRALEDCGEIMTEQGTINLEKGSTHLLRRCDAENLIKQGMLEQISDD 194
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: A0A835ZIC8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIC8_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.430e-65 Identity = 101/192 (52.60%), Postives = 143/192 (74.48%), Query Frame = 1 Query: 10 GAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGG-RTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST 582 G K+K LL EL++ DW+PP+NEDGVR +L EIQAL E++DTL R ++P VK+ + VHH L N+RCLL Y+++RA++ + LRW+TGPVVP L +LSA E + FN YDR+LT++ Q LDLTAD +PP+EL+VEVR L+D ++ TD G V+L +G +LLR +DVEHLVRQG+L+++++ +T Sbjct: 5 GTKAKRLLQELRQGDWMPPFNEDGVRAILQEIQALDQEISDTLASSRQGEEMPIQVKIGMAVHHAGLTHNRRCLLAYVRYRAEKASALRWDTGPVVPDSLAPNLSAAEQDFFNKYDRLLTDYQQDFGLDLTADARPPRELYVEVRSLTDDMDVFTDSGLVRLKKGARYLLRHTDVEHLVRQGMLEQIQSAAT 196
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: A0A3R7MJX0_9STRA (Sld5 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A3R7MJX0_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.420e-60 Identity = 102/192 (53.12%), Postives = 136/192 (70.83%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTS--DIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELE 570 M AK K+LL EL+RSDWLPPYNED VR V+ E L++E+ L + + P V L+V+HQ LLRNKRCL+ YL R ++I LRWETG ++P L Q+L REM+LFN YD++LT++ LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+RQGLL++++ Sbjct: 1 MALNAKGKELLRELQRSDWLPPYNEDLVRQVVDESGLLHEEIVRKLNTFKDNFEEQPASVHCGLIVNHQCLLRNKRCLIAYLYHRVEKIKALRWETGTIIPAPLAQNLCQREMQLFNAYDQLLTDYMADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQIK 192
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: G4YZC9_PHYSP (Sld5 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZC9_PHYSP) HSP 1 Score: 206 bits (523), Expect = 1.810e-60 Identity = 103/190 (54.21%), Postives = 135/190 (71.05%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELE 570 M AK K+LL EL+RSDWLPPYNED VR V+ E L++EL L +P V+ +LVV HQ LLRNKRCLL YL R ++I LRWETG ++P L Q+L RE++ FN YD++LT++ LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+RQGLL++++ Sbjct: 1 MALNAKGKELLRELQRSDWLPPYNEDLVRQVVEESGLLHEELNRKLE-TFKEGMPKSVECALVVSHQGLLRNKRCLLAYLHHRMEKIKALRWETGTIIPGPLAQNLCQREVQFFNQYDQMLTDYMADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQIK 189
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: A0A7S1C9Q6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9Q6_9STRA) HSP 1 Score: 202 bits (514), Expect = 5.240e-59 Identity = 93/193 (48.19%), Postives = 144/193 (74.61%), Query Frame = 1 Query: 7 FGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLG--GRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENES 579 +G+K+K LL+EL+RSDWLP YN++ +R V+ EI AL+ EL DTL G +D+ V ++V H+++LRNKRC+L YL+ R ++I +RWETG ++P ++ +SA+E++ + YD+++T + + + +D+TADL+PPK+L VEV+VL DCGEI TD G V LD+ + H LRRSDVEHL+RQG++++ + E+ Sbjct: 8 YGSKAKALLMELQRSDWLPSYNDEAIRQVVEEINALHAELVDTLEREGFEVADVA--VACGMLVQHESMLRNKRCVLAYLQARLEKIQAMRWETGAMIPPHCKRQMSAKEVDFAHQYDKLVTAYVRDVKIDITADLEPPKDLLVEVQVLKDCGEIWTDSGPVTLDKHSRHFLRRSDVEHLIRQGMVRQTDTEA 198
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: A0A225VV97_9STRA (DNA replication complex GINS protein PSF1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VV97_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.300e-58 Identity = 99/193 (51.30%), Postives = 136/193 (70.47%), Query Frame = 1 Query: 1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDI---PDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELE 570 M AK K+LL EL+RSDWLPPYNED VR V+ E L++E++ + +D+ P V LVV+HQ LLRNKRCL+ Y+ R ++I LRWETG ++P L Q+L E++ FN YD++LT++ LDLTAD++PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+RQGLL++++ Sbjct: 1 MALNAKGKELLRELQRSDWLPPYNEDLVRRVVEESGLLHEEISKKMS--MYADLVNEPASVHCGLVVNHQCLLRNKRCLIAYVHHRMEKIKALRWETGTIIPASLAQNLCQGEVQFFNQYDQLLTDYMADFELDLTADIKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQIK 191
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: A0A2R5GNH7_9STRA (DNA replication complex GINS protein PSF1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNH7_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.090e-57 Identity = 100/192 (52.08%), Postives = 137/192 (71.35%), Query Frame = 1 Query: 7 FGAKSKDLLVELKRSDWLPPYN----EDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVK-VSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQEL 567 +GAK ++LL+ELKRS+WLP YN +DGVR VL EI ALY + + + D+ +P L+V+H + LRNKRCLL YLK+RAD I LRW+ G +P++L++ L A E + F+ YD IL+++ + ++LDL AD++PPK L+VEVRVL DCGEI T G V L + TTH LRRSDVEHL+RQG L+++ Sbjct: 7 YGAKGRELLLELKRSEWLPAYNGKRQDDGVRQVLGEIDALYKRMRSRMA--ESRDMREPFYGCPLMVYHASTLRNKRCLLAYLKYRADLIGNLRWDAGSAIPEDLRRKLCAEEAQYFSAYDNILSDYMREVDLDLAADMEPPKNLYVEVRVLRDCGEIDTVSGPVVLAKDTTHNLRRSDVEHLIRQGALEQV 196
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: K3X6H6_GLOUD (Sld5 domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6H6_GLOUD) HSP 1 Score: 198 bits (504), Expect = 1.270e-57 Identity = 96/189 (50.79%), Postives = 136/189 (71.96%), Query Frame = 1 Query: 13 AKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLG--GRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELEN 573 AK K+LL EL+RSDWLPPYN++ VR V+ E+ +L++++ + L G P V L+V HQ LLRNKRCLL YL R ++I LRWETG ++P L +L RE++ F +YD++LT++ +DL+AD +PPK+L+VEVRVL DCGEIMT++G V L+ +TH LRR DVE L+RQGLL+++++ Sbjct: 5 AKGKELLRELQRSDWLPPYNDELVRQVVEEVGSLHEQIMEKLRVFGDEIEQQPS-VHCGLIVSHQCLLRNKRCLLAYLYERTEKIKNLRWETGTIIPASLAPNLCQREVQFFQSYDQLLTDYMADFEIDLSADTKPPKDLYVEVRVLRDCGEIMTENGLVNLEANSTHFLRRVDVEQLIRQGLLEQIKH 192
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Match: A0A8K1CID8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CID8_PYTOL) HSP 1 Score: 197 bits (501), Expect = 3.410e-57 Identity = 97/188 (51.60%), Postives = 135/188 (71.81%), Query Frame = 1 Query: 13 AKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDP---VKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFAQGLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQEL 567 AK K+LL +L+RSDWLPPYN++ VR V+ E+ L++++ + L RT D + V L+V HQ LLRNKRC+L YL R+++I LRWETG ++P L +L+ RE++ FN YD++LT++ LDLTAD +PPK+L+VEVRVL CGEIMT++G V L+ +TH LRR DVE L+RQG L++L Sbjct: 5 AKGKELLRDLQRSDWLPPYNDELVRQVVEEVGVLHEQILEKL--RTFGDDIEQHQSVHCGLIVSHQCLLRNKRCVLAYLYERSEKIKNLRWETGTIIPATLAPNLNQREVQFFNAYDQLLTDYMADFELDLTADAKPPKDLYVEVRVLKGCGEIMTENGLVNLEVNSTHFLRRVDVEQLIRQGFLEQL 190 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98.21454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig98.21454.1 >prot_Ecto-sp13_S_contig98.21454.1 ID=prot_Ecto-sp13_S_contig98.21454.1|Name=mRNA_Ecto-sp13_S_contig98.21454.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTback to top mRNA from alignment at Ecto-sp13_S_contig98:23380..26511- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig98.21454.1 ID=mRNA_Ecto-sp13_S_contig98.21454.1|Name=mRNA_Ecto-sp13_S_contig98.21454.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3132bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:23380..26511- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig98:23380..26511- >mRNA_Ecto-sp13_S_contig98.21454.1 ID=mRNA_Ecto-sp13_S_contig98.21454.1|Name=mRNA_Ecto-sp13_S_contig98.21454.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=585bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:23380..26511- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |