Homology
BLAST of mRNA_Ecto-sp13_S_contig98.21451.1 vs. uniprot
Match:
D7FKW5_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW5_ECTSI)
HSP 1 Score: 535 bits (1378), Expect = 8.510e-187
Identity = 313/353 (88.67%), Postives = 322/353 (91.22%), Query Frame = 1
Query: 1 MESLGALTYRELQAFAKRHGVKANGSRVDLIQRLSDTHGGDDDTPVEDNTQPGSDERPDTDXXXXXXXXXXXXXXGTTLGVSGTDADNLVTLDRPHGACVQSQYDSDPDKSQQGKSDSQALVTDTPA--------DVAER-----VYATIKETRTTGETPQKTKVKLPVAGRFERAHQNLFASQASIERYGKTPKKSAPARENVPLSKTKASASKARVFAPTPVRPVVSGSAAKSSVKRGLTVASKPCTLVVQRSTKKPTQVKEFRLSSNQTGKREAFTFKPYTGPLRPIVPANNSSFSIGHALKKGSTPVGPKGIKATLASGEAQKARKAARVESSKAQRDKKLAEARFGRA 1020
MESLG LTYRELQAFAKRHGVKANGSRVDLIQRLSDTHGGDDDTPVEDNTQPGSDERPDTDXXXXXXXXXXXXXXGTTLGV TDADNL TLD+PHG CVQSQ+DSDPDKSQQGKSDSQ LVTDTPA DVAER V AT+KETRTTGETPQKTKVKLPVAGRFERAHQNLFASQASIERYGKTPKKSAPA+EN PLSKTKA AS A+VFAPTPVRPV SGSAAKSSVKRGLTVASKPCTLVVQRSTKKPTQVKEFRLSSNQTGKRE FTFKPYTGPLRPIVPANNSSF+IGHA KKGS PV KGIKATLASG+AQKARK A VESSKAQRD+KLA+ARFGRA
Sbjct: 1 MESLGTLTYRELQAFAKRHGVKANGSRVDLIQRLSDTHGGDDDTPVEDNTQPGSDERPDTDXXXXXXXXXXXXXXGTTLGVPDTDADNLATLDKPHGTCVQSQHDSDPDKSQQGKSDSQVLVTDTPAEPEPCAGEDVAERRKSERVSATMKETRTTGETPQKTKVKLPVAGRFERAHQNLFASQASIERYGKTPKKSAPAKENAPLSKTKAFASTAKVFAPTPVRPVPSGSAAKSSVKRGLTVASKPCTLVVQRSTKKPTQVKEFRLSSNQTGKRETFTFKPYTGPLRPIVPANNSSFNIGHAPKKGSNPVRAKGIKATLASGKAQKARKEAHVESSKAQRDRKLADARFGRA 353
BLAST of mRNA_Ecto-sp13_S_contig98.21451.1 vs. uniprot
Match:
A0A6H5K5M9_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M9_9PHAE)
HSP 1 Score: 511 bits (1316), Expect = 2.130e-177
Identity = 306/352 (86.93%), Postives = 315/352 (89.49%), Query Frame = 1
Query: 1 MESLGALTYRELQAFAKRHGVKANGSRVDLIQRLSDTHGGDDDTPVEDNTQPGSDERPDTDXXXXXXXXXXXXXXGTTLGVSGTDADNLVTLDRPHGACVQSQYDSDPDKSQQGKSDSQALVTDTPA--------DVAERV----YATIKETRTTGETPQKTKVKLPVAGRFERAHQNLFASQASIERYGKTPKKSAPARENVPLSKTKASASKARVFAPTPVRPVVSGSAAKSSVKRGLTVASKPCTLVVQRSTKKPTQVKEFRLSSNQTGKREAFTFKPYTGPLRPIVPANNSSFSIGHALKKGSTPVGPKGIKATLASGEAQKARKAARVESSKAQRDKKLAEARFGRA 1020
MESLG+LTYRELQAFAKRHGVKANGSRVDLIQRL DTHGGDDDTPVEDNTQPGSD+RPDT XXXXXXXXXXXXXXGTTLGVS TDADNLVT DRPHGA VQSQ DSD DKSQQGKSDSQALVTDTPA DVAER YATIKETRTTG TPQKTKVKLPVAGRFERAHQ+LFASQASIERYGKTPKKSAPA+ NVPLSKTKASA KA+VFA TPVRPV SGS AKSSVKRGLTVAS PCTLVVQRSTKKPTQVKEFRLSSNQTGKRE FTFKPYTGPLRPIV ANN SF+IGHA KKGS PV PKGIKATLASG+ QKAR+ A VESSKAQRD+KLAEAR GRA
Sbjct: 1 MESLGSLTYRELQAFAKRHGVKANGSRVDLIQRLCDTHGGDDDTPVEDNTQPGSDDRPDTXXXXXXXXXXXXXXXGTTLGVSDTDADNLVTRDRPHGAFVQSQNDSDLDKSQQGKSDSQALVTDTPAEPQPRAVGDVAERCKSGNYATIKETRTTGGTPQKTKVKLPVAGRFERAHQSLFASQASIERYGKTPKKSAPAKGNVPLSKTKASAPKAKVFASTPVRPVDSGSGAKSSVKRGLTVASMPCTLVVQRSTKKPTQVKEFRLSSNQTGKRETFTFKPYTGPLRPIVSANNYSFNIGHAPKKGSNPVRPKGIKATLASGKGQKARREAHVESSKAQRDRKLAEARCGRA 352
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98.21451.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 8.51e-187 / Id = 88.67 Expect = 2.13e-177 / Id = 86.93 Sequence D7FKW5_ECTSI A0A6H5K5M9_9PHAE
Match Name E-value Identity Description
D7FKW5_ECTSI 8.510e-187 88.67 SAP domain-containing protein n=1 Tax=Ectocarpus s... [more] A0A6H5K5M9_9PHAE 2.130e-177 86.93 SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 1529 Hectar predicted targeting category other localisation Exons 6 Ec32 ortholog description SAP domain Ec32 ortholog Ec-17_001610.1 Cds size 1023
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464243.710354-UTR-Ecto-sp13_S_contig98:5728..6234 1681464243.710354-UTR-Ecto-sp13_S_contig98:5728..6234 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig98 5729..6234 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464243.7202697-CDS-Ecto-sp13_S_contig98:6234..6419 1681464243.7202697-CDS-Ecto-sp13_S_contig98:6234..6419 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig98 6235..6419 - 1681464243.7352102-CDS-Ecto-sp13_S_contig98:6711..6805 1681464243.7352102-CDS-Ecto-sp13_S_contig98:6711..6805 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig98 6712..6805 - 1681464243.7508485-CDS-Ecto-sp13_S_contig98:7107..7298 1681464243.7508485-CDS-Ecto-sp13_S_contig98:7107..7298 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig98 7108..7298 - 1681464243.7650251-CDS-Ecto-sp13_S_contig98:7442..7581 1681464243.7650251-CDS-Ecto-sp13_S_contig98:7442..7581 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig98 7443..7581 - 1681464243.783509-CDS-Ecto-sp13_S_contig98:8614..8926 1681464243.783509-CDS-Ecto-sp13_S_contig98:8614..8926 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig98 8615..8926 - 1681464243.7996223-CDS-Ecto-sp13_S_contig98:9147..9249 1681464243.7996223-CDS-Ecto-sp13_S_contig98:9147..9249 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig98 9148..9249 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig98.21451.1
>prot_Ecto-sp13_S_contig98.21451.1 ID=prot_Ecto-sp13_S_contig98.21451.1|Name=mRNA_Ecto-sp13_S_contig98.21451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp
MESLGALTYRELQAFAKRHGVKANGSRVDLIQRLSDTHGGDDDTPVEDNT back to top mRNA from alignment at Ecto-sp13_S_contig98:5729..9249-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig98.21451.1 ID=mRNA_Ecto-sp13_S_contig98.21451.1|Name=mRNA_Ecto-sp13_S_contig98.21451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3521bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:5729..9249- (Ectocarpus species13 EcNAP12_S_4_19m)ATGGAGTCGCTTGGAGCACTCACCTATCGAGAACTGCAGGCGTTCGCCAA
GCGTCATGGTGTGAAGGCGAACGGAAGTAGGGTGGATCTGATACAAAGAC
TG GTAAGAGATATTGTGGGGGGCGCAGATTTGGTTGTCTGTCCTATCAGG
CCTAGTGTTGTACGAAGCTCGATCCGCGGGCTTGTACATGTGTTGCGTGC
ATGCGTTGACTCACTACTTTTAATTAACGGAGAGATGTTTGTCCTAGCGC
TAAGTAATACCTGATGTTTTGTGCTGTCCGACCCCGGGTGCTTTTCATTT
ATTCGCCCGGCTTCGCGCGTTAGTCCGACACACACGGAGGTGACGACGAC
ACGCCGGTTGAAGACAACACCCAACCCGGAAGCGATGAAAGACCCGACAC
GGACAACGACAAGCCAGTTGAAAACATCACCCAACCCGGAAGCGATGGAA
CGACTCTAGGCGTGTCCGGCACGGACGCCGACAATCTCGTCACCCTTGAC
AGACCTCATGGCGCATGTGTCCAGTCTCAATATGACTCCGACCCCGACAA
GTCTCAACAAGGCAAGAGCGACTCGCAGGCTCTTGTCACAGACACGCCTG
CCGATGTGGCGGAGAGGGTCTATGCCACCATCAAG GTAGGACACACACAG
AAACAATCGCGTTGCGGCGAAAAATTGAAGCAGATGACCTGCAATACCTG
GATGTGATGCTCGGACAAACGCCGAAGGCAATATTTTTTCTCTACACCAA
GATCGTGTGCAGCGTATCTATGTATCTACTACATATCTGACCAGTACTGC
TGTCCCGGTAATCTTCCGCGTGCAACGGACGGTTGCGGTTTACCAAGCGC
AAACGTTAGATACGTAAATCAAGAAAGGTAGCTCTCATGTTTACAAGTAT
AGCATTCGCTGGCACTACTTCTGTAGCTTCTGGAGCGCCTCTTGCTCTAA
ACAAAATCTATGCTTCCAACGCAAAACTTTTCCTACACACCACCGAGCAG
ATGAAGCGAGTCCACGGCAGATACATACACCAGACGCCAACATTCACAGC
AGTATTTCACCAGTCTTCATGAACGCTATCTGCGTATATGCCGAACAGAA
AGCTCCGTTGGAACATCGAATTGATTATTTTGCACAATAGAGGAAGCGGA
GAGGGGAATTGACGCACAATTTTGTTGGGACTCTGCAGACCTATGTCGGA
TTGCTGTGCATACCGACAGACGCCTTTGCCGCTGTGCAAGTGGGCGCTGG
AACTGCTTTTTTCGTGTGTTTGGGGCAATACGTGCTCAGTCTGCCACATG
TTCTGGAGCATGTGTCTTGAGATTGTTCAACTAAAAACCTTAGATCGAGT
TTAGCACAGCTGATACGGAGCGTTAAGGGATGGTGCTCCGGCAGAGCCAA
AAGCTGCCGTGCGTAGGAAAACATTCAAATTTTTATTGTTTTCCGTTTTT
GCTGACTTAACACCTGAGGCAACATGGTCCAGCAGGCATGCGGCGGTTCA
TTTTGAGGCGCCTAAAGAAGTTAGAGGCTTTATGCGCCAGCTTGGCACCC
ATGTTGCATGACACCGTTGGAAGAAACCTCTTGTAAGGGGGCAGGAATGG
CTGTCCCGTTTGTGCCCGACTTTTTGAAGCCGACATAAGCCTGCTGTGGA
TTGCCGCTCATGTCGCAGGAAACACGAACCACCGGCGAAACACCCCAGAA
GACTAAGGTCAAACTGCCGGTTGCTGGCAGATTCGAGCGTGCGCACCAGA
ATCTCTTTGCGAGCCAGGCATCAATAGAACGCTATGGAAAGACTCCGAAG
AAGTCAG GTATGCGAACTTTCATGAGTCTTTCCAGGTAATCTGTTGCTTC
GCCTCAGCTCCCGCCATTCTCTGAAGAACACTTAAGTGTGTTTTGGTTCC
CCAGGTCAGATGACATCGCAAACGCTTCCGCGCTACTCGTTCCATGTGCA
GCACCTGCCAGGGAAAACGTTCCTCTGTCCAAGACCAAGGCATCTGCATC
CAAGGCCAGAGTGTTTGCGCCGACACCTGTCCGCCCTGTCGTTTCCGGAT
CTGCCGCCAAATCAAGCGTCAAGCGGGGCCTGACAGTGGCCAGCAAGCCG
TGCACACTGGTTGTTCAGCGCAGCACAAAAAAGCCGACGCAG GTGGAAGC
TTTTGTCTCTCGCAACTAATGGCACCCTCAACAAGGGAATGTCCACGATT
CGTTGGACAGTGTTGTTATTTTTGACAATGTCCATAACCATTTTTTGCCG
ACCTTATCAGTGAAAGTAGATTGTTTGCACCGAAAGAAATCTTGTAGAAT
CTTGGGGAAGATGCCAATGTTGTCGAACGATTGGCATCGTACGGCAAGAT
GTGATGGTAAATCCCACGCAGGTGAGGTCGGTCTGTTTAATCGCACATCG
AAAAACGAATCTCCAGCTCTTATGGCCTTTCGTTGCTTCAACAGGTGAAG
GAATTCCGCCTGAGCTCCAACCAGACTGGTAAACGGGAAGCGTTCACTTT
TAAACCCTACACTGGACCACTGCGCCCAATCGTGCCAG GTGGGTGATATT
GTCAATGCCAAAGCGTACGTAGCTGGTTTCTATGATTTATGGCACCACTA
TACTTCGAGGTGCGACCGGGCTGGAAAAATACTCAGAATTTCTTGTTCCT
CTTAGGCGTACTTGCTTGGTAACGTCTGAGGTGTCTTAAGGTCGCTATGC
GTTGGTCCATATTGATTCGAGGTCGCATCTACATCCCACAGAAGGTGCGT
CTATTTGGTGGTACGTCCTAAGATTGTTTCTATTTTTCAATCTATTTCTT
CTCCACCCCCGCGTCGCTCCTCATTTCCAGCAAACAACTCCAGCTTTAGC
ATTGGACATGCACTCAAGAAAGGATCCACCCCTGTCGGTCCGAAGGGAAT
TAAAGCAACCCTGGCGAGTGGTGAGGCGCAGAAAGCCCGGAAAGCAGCTC
GCGTCGAGTCTAGTAAGGCTCAACGAGACAAGAAATTGGCGGAGGCACGG
TTTGGTCGTGCCTAA CTCGTTGCTGGCCATGACTGAGTCGCCCTATGCAT
CAAACTATACAAGAGAACGTACGCTTGCCCTTGGACGCATGCACGCTTGT
CCGCAGTCCAGACAATTTGGTTCGAGCGTGTTTTCTGTCCGACCATGAGA
AGCGAGGAGAGATCTTCTTCGCCGAATGGTGGTTGTTGTATCTAAAATTT
AGCCTTTGTTCGCTGGAAAGGAGCCATCTCTGCGGCAATGTCGTGTTGAG
TCATAGCAATATTGTTTGCATTGAGTAGATCGTGTTTTTTTTTCATTTCT
GCCTGTGCCTTTGTCGAGACATGTCCTGAAAACACCGACACAACTCTGCA
CCGCATACTTATTCGCTGTTCCAGTTTGATTAAAACTGCGTTGGTTAACT
AGCTAGCTGCATGTCGAAGATGGATGAAAGCGAATGCGTTTTTTGGGCGT
GCGACCTGTACGTGTGGGGTACACAGAAACGAGAAGTCACCACGGTAGAT
TCAAACATATGGCATTCACGA back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig98:5729..9249-
>mRNA_Ecto-sp13_S_contig98.21451.1 ID=mRNA_Ecto-sp13_S_contig98.21451.1|Name=mRNA_Ecto-sp13_S_contig98.21451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1023bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:5729..9249- (Ectocarpus species13 EcNAP12_S_4_19m) back to top