Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1596 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-17_001620.1 |
| Cds size | 1596 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464243.5957508-CDS-Ecto-sp13_S_contig98:2406..2841 | 1681464243.5957508-CDS-Ecto-sp13_S_contig98:2406..2841 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98 2407..2841 + |
| 1681464243.6150444-CDS-Ecto-sp13_S_contig98:3040..3184 | 1681464243.6150444-CDS-Ecto-sp13_S_contig98:3040..3184 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98 3041..3184 + |
| 1681464243.627388-CDS-Ecto-sp13_S_contig98:4072..4219 | 1681464243.627388-CDS-Ecto-sp13_S_contig98:4072..4219 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98 4073..4219 + |
| 1681464243.6431248-CDS-Ecto-sp13_S_contig98:4507..4747 | 1681464243.6431248-CDS-Ecto-sp13_S_contig98:4507..4747 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98 4508..4747 + |
| 1681464243.6592348-CDS-Ecto-sp13_S_contig98:4861..5287 | 1681464243.6592348-CDS-Ecto-sp13_S_contig98:4861..5287 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98 4862..5287 + |
| 1681464243.6712728-CDS-Ecto-sp13_S_contig98:5492..5696 | 1681464243.6712728-CDS-Ecto-sp13_S_contig98:5492..5696 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig98 5493..5696 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig98.21450.1 >prot_Ecto-sp13_S_contig98.21450.1 ID=prot_Ecto-sp13_S_contig98.21450.1|Name=mRNA_Ecto-sp13_S_contig98.21450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=532bp
MTRPGSAEIGNPRGHTTGEGNIEQELLLKIGQLAKHHARNVQALNRLRST
TSAPPTTAWEGVAVPPPRGRPNPVELRRRATPKGDPNLKSARSQHHSFSP
SDRVFTRVVDSSSTRKKLEPTVVKPFRGMETHVTAWTRKMRAYEELEIRT
KKDEEEANARDRERLITAINDGREFSGVITRSNEMMARRRQRETEAEEND
DEARRSHEFKARPLHIADEDWQTIKDRQSLRRKQRIQMRMDLMSSLSYLP
RRMAMHALKRKAAASTTAEFPENGDSPSETKARTRYKSVSPGQIREVLAR
RQRLWDQQLAAARRKKKPVVPQVLPMEERENVYRQRAKERARRKQDKSLT
EEIRQRPRRKKVPLAATVPVVPRSTNSFSLKTAHVRARLAGEKSDLKRQK
QEELARRTRQQAMSKTISKVMRRMDYQQTRLARRPTAAEARQTARESQER
YHVCLKENKQKLEQATRNAPTLWERHDAEVRKEAAKRIALSTMAERVFGA
GSVGAERENLRGSGIDKFFDEEERALLCCAN* back to topmRNA from alignment at Ecto-sp13_S_contig98:2407..5696+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig98.21450.1 ID=mRNA_Ecto-sp13_S_contig98.21450.1|Name=mRNA_Ecto-sp13_S_contig98.21450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3290bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:2407..5696+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGCGTCCTGGATCCGCGGAAATAGGAAACCCACGAGGCCATACTAC
TGGTGAAGGCAACATTGAACAAGAATTACTCCTCAAAATTGGTCAACTTG
CCAAGCATCATGCTAGAAACGTCCAAGCTCTCAACAGGTTGAGGAGCACC
ACCAGCGCACCTCCGACAACGGCATGGGAAGGTGTCGCCGTTCCACCACC
GAGGGGACGCCCCAATCCTGTCGAACTCAGAAGAAGAGCAACACCAAAGG
GCGATCCCAACCTGAAAAGTGCTCGTTCACAACATCATTCATTCTCGCCA
TCCGACCGCGTCTTCACTAGAGTTGTCGATTCTTCGTCGACCAGGAAGAA
GCTGGAGCCCACAGTGGTTAAGCCGTTCCGCGGTATGGAGACTCATGTAA
CCGCCTGGACCAGGAAAATGAGGGCCTATGAGGAGGTGAGCTACTTTCTG
TGGTGACATGAAACATCAAAGACGATGTGGGCTGGAACTGGAACGTTGCC
CCTAATGCACAACACAACCAACACTTTGCAACTGATCCGGTTGGCTGTGA
CCATTGCGTCAGTAAAACTCTAATAGGTGAATACTGTTCCACAAACTTTG
TCACCTACGACCAACCTCAAACGATCTACCATAGCTTGAAATTCGAACGA
AGAAGGATGAGGAGGAAGCGAACGCCAGAGATCGCGAGCGCCTCATCACG
GCCATCAATGACGGAAGGGAATTTTCCGGCGTCATTACTCGATCAAATGA
AATGATGGCGCGACGCCGACAAAGGGAGGTGAGCCACAAAAACCCCATTT
TCCATGGCACCTTTGTGGTGGCGAGGAGTATCCAGCGTTGATCAACCGTG
GGAACATCAGTGGGTTAAAACAAGATCCCTCTGGACCCGCCCAAGTTGTG
CTCCACACTAATCCATGCAGATGTGTCACAGTCTTTGTTCGGGTTGTTGC
GGTGGGCGGGTTGACTTTCTTTCGTTGATGTATTGCGCCGGTGTTTTGAG
ACCTATTGGACTCGACGTAGACTGGTGCTGATCGATGGTAAATGAAAATG
CATATATGTACGTTGTATTGGCAACGATTGAGGTGTACTTTACGATGTAG
TGGGTACGGAAATAGTCATGCTTTGATGAGGCAAATATATCTTTCCCGGG
CAAAAAAGCACGGTCCAGATGCCTGCATTGGAAGGGCCATTCATACGAAG
AAGTTAGAGAGGCACGTACATGTGTAACTTTGTAAAATCTTCTCCTCTAT
TTGTTGATGTATTGCGCTGGTGTTTTGAGACCTATTGGACTCGACGTAGA
CTGGTGCTGATCGATGGTAAATGAAAATGCATACATGTACGTTGTATTGG
CAACGATTGAGGTGTACTTTACGATGTAGTGGGTACGGAAATATTCATGC
TTTGATCAGGCAAATATATCTTTCCCGGGCAAAAAAGCACGGTCCAGATG
CCTGCATTGGAAGGGCCATTCATACAAAGAAGTTAGAGAGGCACGTACGT
GTGTAACTTTGTAAAATCTTCTCCTCTATTTGTTCTTGATATAGTTGCAC
TCTTTGCAGCTGACGTTATGGTGACGGAGATGCTGCATTTTCTATTTATT
GATGCACACGAATCCACTGGGTGTAGCCAGAAAATTCCTCACGGCGAGGC
TCGTTTCACGAACCAGACAGAAGCCGAGGAAAACGATGACGAAGCAAGGC
GAAGTCATGAATTCAAGGCTCGGCCTCTTCACATCGCCGATGAAGACTGG
CAAACAATCAAGGATAGACAAAGTTTAAGGCGGAAGCAAAGGATCCAGAT
GCGGATGGACTTGGTGAGTGAGACCGTCAGTCTCGTGTGGCACCGCCAGA
CCTGCCCCACCATCGTCCCCTCCTCAGCCAACTAGCAACCGACAAGAAAA
CAGTGTGTTCGGGACGAACCAGTGTACAAAGAGTGGAACTACATGCCATC
TTTCCCCCGATCGATGTGGAACTGCTATAGACAGCTTCCCATCCTGAAAG
ACGGCATCGGTCCATACGCTTTGTAGCGCTCCAGCTTTCGGGCAGTTTTT
ATAGCAAGAATCGTGTCTGCTGCAACTCCAACTTTGGTCGCACTTTGGCA
GATGTCGTCTCTCTCCTATCTCCCAAGGCGTATGGCTATGCATGCGCTGA
AACGCAAGGCTGCGGCTTCTACCACCGCCGAATTTCCTGAGAACGGAGAT
AGCCCAAGTGAGACTAAAGCTCGCACGAGATATAAATCGGTTTCACCCGG
GCAGATCCGAGAAGTGTTGGCAAGAAGGCAGCGCCTATGGGATCAGCAGC
TTGCTGCAGCCAGACGGAAAAAGAAACCGGTGGTACCTCAGGTGTGTTGT
CTCATTCTCGTGTTTATCGCCTGGTCAAGGCTGCACTCGTTCCAGTTCAA
ACCTCAAATTCCACTGCTTCAAACCCTGGTCAACATACGCCTGCTCTACC
TATAGGTTCTCCCAATGGAAGAGAGGGAAAATGTTTACCGACAAAGAGCA
AAAGAGCGTGCTCGACGGAAGCAAGACAAATCGCTTACGGAGGAAATCAG
ACAGCGTCCCCGGAGGAAGAAAGTGCCTTTAGCAGCTACTGTGCCCGTTG
TACCCCGCAGCACAAACAGCTTCTCTCTTAAGACGGCACACGTGCGGGCT
AGACTAGCGGGAGAAAAGAGCGATCTCAAACGACAAAAACAGGAGGAGTT
GGCAAGGCGTACCAGGCAGCAAGCAATGAGCAAGACTATCTCTAAAGTAA
TGAGGCGGATGGATTATCAGCAAACGAGACTAGCTCGTCGACCGACAGCC
GCCGAGGCTCGACAAACGGCCCGGGAATCTCAAGAAAGATACCATGTCTG
TCTGAAAGAGAACAAGCAAAAGCTAGAACAGGTGCGTGCTGATGGGCCAG
CAGTGGCACGGTAAGGACTGCAGGTTGTGCCAAGCTTGCTTTCTTGGAGT
ACTCGCTGGTGGATTACGACAACACAAAATCCAGTGCGGACAAAAACGCG
ATGGTCGGCTGTTGATGAGGAAATGTGCACCAACGAGCAGTTCACTCCAA
CAACCTGATGTGCATTGCCCATACTTCGCTGTGCAGGCCACTCGCAATGC
CCCTACACTGTGGGAGAGGCACGACGCTGAGGTTCGCAAAGAGGCAGCAA
AACGTATCGCGTTGTCGACCATGGCAGAAAGAGTATTTGGAGCTGGATCG
GTGGGGGCTGAGCGTGAAAACTTGAGAGGGTCTGGTATTGACAAATTCTT
TGACGAAGAAGAGCGTGCACTTTTATGTTGTGCGAATTAG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig98:2407..5696+ >mRNA_Ecto-sp13_S_contig98.21450.1 ID=mRNA_Ecto-sp13_S_contig98.21450.1|Name=mRNA_Ecto-sp13_S_contig98.21450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1596bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:2407..5696+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGCGTCCTGGATCCGCGGAAATAGGAAACCCACGAGGCCATACTAC
TGGTGAAGGCAACATTGAACAAGAATTACTCCTCAAAATTGGTCAACTTG
CCAAGCATCATGCTAGAAACGTCCAAGCTCTCAACAGGTTGAGGAGCACC
ACCAGCGCACCTCCGACAACGGCATGGGAAGGTGTCGCCGTTCCACCACC
GAGGGGACGCCCCAATCCTGTCGAACTCAGAAGAAGAGCAACACCAAAGG
GCGATCCCAACCTGAAAAGTGCTCGTTCACAACATCATTCATTCTCGCCA
TCCGACCGCGTCTTCACTAGAGTTGTCGATTCTTCGTCGACCAGGAAGAA
GCTGGAGCCCACAGTGGTTAAGCCGTTCCGCGGTATGGAGACTCATGTAA
CCGCCTGGACCAGGAAAATGAGGGCCTATGAGGAGCTTGAAATTCGAACG
AAGAAGGATGAGGAGGAAGCGAACGCCAGAGATCGCGAGCGCCTCATCAC
GGCCATCAATGACGGAAGGGAATTTTCCGGCGTCATTACTCGATCAAATG
AAATGATGGCGCGACGCCGACAAAGGGAGACAGAAGCCGAGGAAAACGAT
GACGAAGCAAGGCGAAGTCATGAATTCAAGGCTCGGCCTCTTCACATCGC
CGATGAAGACTGGCAAACAATCAAGGATAGACAAAGTTTAAGGCGGAAGC
AAAGGATCCAGATGCGGATGGACTTGATGTCGTCTCTCTCCTATCTCCCA
AGGCGTATGGCTATGCATGCGCTGAAACGCAAGGCTGCGGCTTCTACCAC
CGCCGAATTTCCTGAGAACGGAGATAGCCCAAGTGAGACTAAAGCTCGCA
CGAGATATAAATCGGTTTCACCCGGGCAGATCCGAGAAGTGTTGGCAAGA
AGGCAGCGCCTATGGGATCAGCAGCTTGCTGCAGCCAGACGGAAAAAGAA
ACCGGTGGTACCTCAGGTTCTCCCAATGGAAGAGAGGGAAAATGTTTACC
GACAAAGAGCAAAAGAGCGTGCTCGACGGAAGCAAGACAAATCGCTTACG
GAGGAAATCAGACAGCGTCCCCGGAGGAAGAAAGTGCCTTTAGCAGCTAC
TGTGCCCGTTGTACCCCGCAGCACAAACAGCTTCTCTCTTAAGACGGCAC
ACGTGCGGGCTAGACTAGCGGGAGAAAAGAGCGATCTCAAACGACAAAAA
CAGGAGGAGTTGGCAAGGCGTACCAGGCAGCAAGCAATGAGCAAGACTAT
CTCTAAAGTAATGAGGCGGATGGATTATCAGCAAACGAGACTAGCTCGTC
GACCGACAGCCGCCGAGGCTCGACAAACGGCCCGGGAATCTCAAGAAAGA
TACCATGTCTGTCTGAAAGAGAACAAGCAAAAGCTAGAACAGGCCACTCG
CAATGCCCCTACACTGTGGGAGAGGCACGACGCTGAGGTTCGCAAAGAGG
CAGCAAAACGTATCGCGTTGTCGACCATGGCAGAAAGAGTATTTGGAGCT
GGATCGGTGGGGGCTGAGCGTGAAAACTTGAGAGGGTCTGGTATTGACAA
ATTCTTTGACGAAGAAGAGCGTGCACTTTTATGTTGTGCGAATTAG back to top
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