mRNA_Ecto-sp13_S_contig9796.21447.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: D8LGP5_ECTSI (Farnesyl pyrophosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP5_ECTSI) HSP 1 Score: 740 bits (1910), Expect = 2.730e-267 Identity = 374/401 (93.27%), Postives = 380/401 (94.76%), Query Frame = 1 Query: 1 KRPGATDEPFADQASEILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQVLPIYLTLAAGGAAYFLYQEENVGKAWECFCEFDELAKYAFAVLAVAFSHALARVSPGSSKGSTGASSSSGQGLAVEDSALVIYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYK-----EIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 K PGATDEPFADQASEILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQVLPIYLTLAAGGAAYFLYQEEN+GKAWECFCEFDELAKYAFAVLAVAFS+ALARVSPGSSKGS+GASSSSGQGLAVEDSALV+YPRELP DPKKSFEAMHKFLV+ELV DVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEA+GRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYK EIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAP L RFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV Sbjct: 15 KGPGATDEPFADQASEILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQVLPIYLTLAAGGAAYFLYQEENIGKAWECFCEFDELAKYAFAVLAVAFSYALARVSPGSSKGSSGASSSSGQGLAVEDSALVVYPRELPGDPKKSFEAMHKFLVEELVADVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEANGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVPKVQEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPSD----------LTRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 405
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: A0A6H5L554_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L554_9PHAE) HSP 1 Score: 719 bits (1857), Expect = 6.670e-259 Identity = 371/421 (88.12%), Postives = 375/421 (89.07%), Query Frame = 1 Query: 13 ATDEPFADQASEILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQVLPIYLTLAAGGAAYFLYQEENVGKAWECFCEFDELAKYAFAVLAVAFSHALARVSPGSSK-----------GSTGASSSSGQGLAVEDSALVIYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYK------------------EIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 ATDEPFADQAS+ILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQVLPIYLTLAA GAAYFLYQEENVGKAWECFCEFDELAKYAFAVLAVAFS+ALARVSPG SK GS+GASSSSGQGLAVEDSALV+YPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYK EIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAP FTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV Sbjct: 18 ATDEPFADQASDILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQVLPIYLTLAAVGAAYFLYQEENVGKAWECFCEFDELAKYAFAVLAVAFSYALARVSPGCSKVRYGTNRVPTAGSSGASSSSGQGLAVEDSALVVYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVGRQKQRQTHPEFRVTQSEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAP---------------FTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 423
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: A0A835YUF9_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUF9_9STRA) HSP 1 Score: 373 bits (957), Expect = 2.780e-123 Identity = 196/350 (56.00%), Postives = 241/350 (68.86%), Query Frame = 1 Query: 178 AGGAAYFLYQEENVGKA----WECFCEFDELAKYAFAVLAVAFSHALARVSPGSSKGSTGASSSSGQGLAVEDSALV----IYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWY-----KEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 AGGA Q + KA W F + KY +VL V+ H ++++ P S G GL +L R+ D K SF ++ L++E++D++A +YE IP QL W++ LEYN KGGKMNRG+GV+DV +AFA++ GR L H E CR ++LGWC+EWLQAFFLVADDVMD S TRRGQPCW+ K+IAIND+FILE+ VFK+L RHF+ E+YYLQL+ELFHDVTYRTEMGQLLDLTSQP+D P P RFT RY MIV+YKTA+YTFYLPCAIGMIYAGV DP+S+ LAR ICC IGE+FQIQDDYLDC+GDP+ IGKV Sbjct: 19 AGGAVAIAAQMLSTSKAAEGAWHSFVMLPDTDKYLISVLVVSALHFVSKLFPASDDLRLGLGRERYPGLLPRALSLPDPRSTEVRDWEGDLKGSFASLCDVLIEEVLDELASDYEAIPEQLQWMRAMLEYNVKGGKMNRGLGVIDVQKAFAKSSGRTLSHREHCRAAVLGWCIEWLQAFFLVADDVMDDSHTRRGQPCWFRVPHVKQIAINDAFILESLVFKVLNRHFSQESYYLQLMELFHDVTYRTEMGQLLDLTSQPLDKP----------PDFTRFTKTRYAMIVKYKTAFYTFYLPCAIGMIYAGVSDPSSFALARRICCTIGEYFQIQDDYLDCYGDPKFIGKV 358
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: A0A835Z5G4_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G4_9STRA) HSP 1 Score: 358 bits (920), Expect = 5.590e-117 Identity = 205/413 (49.64%), Postives = 251/413 (60.77%), Query Frame = 1 Query: 28 FADQASEILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQVLPIYLTLAAGGAAYFLYQEENVGKAWECFCEFDELAKYAFAVLAVAFSHALARVSPGSSKGSTGASSSSGQGLAVEDSALVIYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGK---------------------MNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWY-----KEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 A Q + +L PV+LVV M AV W L F + G L +Y A AA L + +AW A+ A L + S+A +R AS +G G A + D K SF A+ L++E ++++ Y+ IP QL W++ LEYN KGGK MNRG+GV+DV +AFA GR L + E CR ++LGWC+EWLQAFFLVADDVMD S TRRGQPCWY K+IAIND+FILE+ V+++L+RHF+ E+YYLQLVELFHDVTYRTEMGQLLDLTSQP+D P P RFT RY MIV+YKTA+YTFYLPCAIGMIYA V DP+S+ LAR ICC IGE+FQIQDDYLDC+GDP VIGKV Sbjct: 29 LAQQVAHVLG---PVLLVVLGMAAVSWLSGLVFRGKSREG-FLALYFAAAVAVAAQLLVASGDAAEAWRMLSALPASARCAVGALLSSLSYAASRA--------VFASGGAGDGDAAA--------ADWEGDAKGSFAAICDGLIEEALEELKTGYDAIPEQLQWVRAMLEYNVKGGKASHRLKLAVPSHRDAPSAARPMNRGLGVIDVQKAFATKSGRTLSNLEHCRAAVLGWCIEWLQAFFLVADDVMDDSHTRRGQPCWYRVPHVKQIAINDAFILESLVYRVLRRHFSQESYYLQLVELFHDVTYRTEMGQLLDLTSQPLDKP----------PDFARFTATRYAMIVKYKTAFYTFYLPCAIGMIYASVSDPSSFALARRICCIIGEYFQIQDDYLDCYGDPAVIGKV 411
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: A0A7S2UU78_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU78_9STRA) HSP 1 Score: 308 bits (788), Expect = 2.870e-97 Identity = 159/272 (58.46%), Postives = 199/272 (73.16%), Query Frame = 1 Query: 394 VIYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADG-RELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKE-----IAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPM-DAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 V YP+ LPDD K++F+ + L +ELV+D+ NYE +DWI +YN KGGK+NRG VV+V + A + G ++L E+ R + LGWCVEWLQAFFLVADD+MD S TRRGQPCWYK+ IAINDSF+LE+ VF++LKRHF E YY +LV+LFH+V ++TE+GQLLDLTSQPM + PH H L RFT RY++IV+YKTA+YTFYLP A+GMI +G + LAR+ICC IGEFFQIQDDYLDCFGDP+V GKV Sbjct: 136 VTYPQTLPDDLKQAFDVCYISLAQELVNDLPSNYEMPQEVIDWISNMHDYNVKGGKLNRGRTVVEVHQRLAASTGVQKLSARELYRAAALGWCVEWLQAFFLVADDIMDDSETRRGQPCWYKKSDVKMIAINDSFLLESAVFRILKRHFGSEPYYAKLVDLFHEVIFQTELGQLLDLTSQPMTNDPHK------HVVDLTRFTINRYQLIVKYKTAFYTFYLPLALGMITSGHGTASKLSLARNICCIIGEFFQIQDDYLDCFGDPKVTGKV 401
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: A0A7S3XXN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXN8_HETAK) HSP 1 Score: 299 bits (766), Expect = 2.770e-94 Identity = 150/271 (55.35%), Postives = 195/271 (71.96%), Query Frame = 1 Query: 394 VIYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEAD-GRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKE-----IAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 + YP+ DD K +F AM+ L +LV ++ +E + WI ++YN +GGKMNRG+ V ++R A + GR+L + E+ R +LGWC+EWLQAFFLVADD+MD SLTRRGQPCWY++ IAINDSFILE+ VF++LK+HF HE Y Q++++FH+V Y+TE+GQLLDLTSQP+D P L RFT R+R+IV+YKTAYYTFYL A+GMI +GV +PA Y A+ ICC IGE+FQIQDDYLDC+GDP VIGKV Sbjct: 128 LSYPQLPKDDDKAAFMAMYDHLKHDLVAELPVVFEQPDEAVRWIGGMVDYNVQGGKMNRGLVVPAIMRTLARKNKGRDLTNTELARACVLGWCIEWLQAFFLVADDIMDDSLTRRGQPCWYRKPEVKMIAINDSFILESGVFRLLKKHFGHEETYSQILDVFHEVIYQTELGQLLDLTSQPLDGPTD----------LDRFTVERHRLIVKYKTAYYTFYLSTAMGMIDSGVTEPALYETAKRICCMIGEYFQIQDDYLDCYGDPAVIGKV 388
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: W7TD59_9STRA (Farnesyl pyrophosphate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD59_9STRA) HSP 1 Score: 296 bits (758), Expect = 4.510e-94 Identity = 149/271 (54.98%), Postives = 197/271 (72.69%), Query Frame = 1 Query: 394 VIYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQL-DWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWY-----KEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 + YP LP D K++F + L EL+ ++ YE +PA+ +W+++ +EYN KGGK+NRG+ VV V R A GR L E R ++LGWC+EWLQAFFLVADDVMD S+TRRGQPCW+ K IA+NDSFILE++VF++LKRHF HE +Y+ L +LF +VT +TE+GQLLDLTSQPMD + D L RFTP RY++IV+YKTA+YTFYLP A G+I +G+ PA+ AR +C +GE+FQ+QDDYLDC+GDP++IGKV Sbjct: 40 LSYPSSLPPDEKEAFIEICDQLTVELLTELKSRYE-LPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDG---QID-------LQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKV 299
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: A0A7S2JT51_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JT51_9STRA) HSP 1 Score: 274 bits (701), Expect = 6.850e-86 Identity = 148/274 (54.01%), Postives = 184/274 (67.15%), Query Frame = 1 Query: 394 VIYPREL---PDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEA-DGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYK-----EIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 + YP E K FE + L E+++ + N E +W + ++YN GGK+NRG+ V+ V R +A +GREL EV R S+LGW VE+LQAFFLVADDVMD S TRRGQPCWYK IAINDSF+LE+ F M+K+HF E YY +L+ELF +V +TE GQLLDLTSQP A + L RFT RY++IV+YKTA+YTFYL AIGMI +GV DP +Y LA++ICC IGE+FQIQDDYLDC+GDP VIGKV Sbjct: 4 ITYPLEAIAAATTDKAKFETIFPLLRDEMIEHMKQN-EMPEEACEWAKRMMDYNVPGGKLNRGVTVIAVQRTLVQANEGRELTDLEVARASVLGWAVEFLQAFFLVADDVMDDSQTRRGQPCWYKLAEVGNIAINDSFLLESFCFTMIKKHFGMEPYYGRLLELFLEVVQQTEFGQLLDLTSQPATASASSSKID-----LSRFTLERYKLIVKYKTAFYTFYLSVAIGMITSGVTDPEAYSLAKEICCIIGEYFQIQDDYLDCYGDPAVIGKV 271
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: A0A7S3GWV7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWV7_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.060e-85 Identity = 170/402 (42.29%), Postives = 235/402 (58.46%), Query Frame = 1 Query: 40 ASEILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQVL---PIYLTLAAGGAAYFL-YQEENVGKAWECFCEFDELAKYAFAVLAVA---FSHALARVSPGS-------SKGSTGASSSSGQGLAVEDSALVIYPRELPDDPKKSFEAMHKFLVKELVDDVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWY-----KEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 A+EIL P + + +A+ V L + + + +VL ++ AGG +Y + +Q+ N+ AWE F + +++ +++ V F A+ P S+ ST A S +V+ + P LP D K FE M L KE++DD+ YE +W+ + Y GGKMNRG+ + V A+ G L ++E C+ + LGWC+E+LQAFFLVADD+MD S+TRRGQPCW+ K IA+NDSFILE+ V+K+LK++F E YY QLV+LF + T +TE GQLLDLTSQ + AP L RFT RY IV+YKTA+Y+FYLP A GMI AGV D Y AR+I +GE+FQIQDDYLDC+G PE+IGK+ Sbjct: 14 AAEILQAVLPDLAPLLGALALASLVILISNSFSKTNKVLVQAALFAAALAGGLSYLIVHQDANLVSAWELFIKLSIETRFSLSLVLVGIVYFGGAMYLAPPEDAGKDGVPSEASTNALSVYRTPASVDRAVTFEVPLSLPADDKVFFEEMLDKLCKEILDDLPVTYELGTEATEWVGRMMTYTVAGGKMNRGLATLSVRGTLAKLVGHTLSNKERCQAAALGWCIEFLQAFFLVADDLMDESVTRRGQPCWFRLPEVKTIAVNDSFILESFVYKILKKYFGEEAYYYQLVDLFLETTRQTEFGQLLDLTSQKLGAPID----------LNRFTIERYTGIVKYKTAFYSFYLPVACGMIIAGVTDVHLYDTAREILVIMGEYFQIQDDYLDCYGTPEMIGKI 405
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Match: A0A5D6Y8S8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8S8_9STRA) HSP 1 Score: 270 bits (690), Expect = 9.440e-85 Identity = 136/230 (59.13%), Postives = 167/230 (72.61%), Query Frame = 1 Query: 514 LDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKE-----IAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPHAKHDCAPHPPPLCRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKV 1188 +DW+ + + YN GGK+NRG+ V+ +A A+ G EL E + SILGWC+EWLQAFFLVADD+MD S+TRRGQPCW+++ IAIND+F+LEA VF++LK+HF + YL LVELFHDV +RTE+GQLLDLTSQP+DA P L RFTP RY IV KTAYYTFYL A M+ +GV D S+ LA+ IC RIGE+FQIQDDYLDC+GD VIGKV Sbjct: 16 IDWVDQVINYNCLGGKLNRGISVIHSTQALAQ--GAELSPELKRKASILGWCIEWLQAFFLVADDIMDDSVTRRGQPCWFRDPKVQMIAINDAFLLEAFVFQILKKHFRSDACYLPLVELFHDVIFRTELGQLLDLTSQPLDAE----------PDLARFTPERYHQIVVNKTAYYTFYLSAACAMLLSGVADEGSHALAKRICVRIGEYFQIQDDYLDCYGDAAVIGKV 233 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9796.21447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9796.21447.1 >prot_Ecto-sp13_S_contig9796.21447.1 ID=prot_Ecto-sp13_S_contig9796.21447.1|Name=mRNA_Ecto-sp13_S_contig9796.21447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=396bp KRPGATDEPFADQASEILDQAWPVILVVGAMMAVQWGVTLYFGAATASGQback to top mRNA from alignment at Ecto-sp13_S_contig9796:1018..5730+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9796.21447.1 ID=mRNA_Ecto-sp13_S_contig9796.21447.1|Name=mRNA_Ecto-sp13_S_contig9796.21447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4713bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9796:1018..5730+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9796:1018..5730+ >mRNA_Ecto-sp13_S_contig9796.21447.1 ID=mRNA_Ecto-sp13_S_contig9796.21447.1|Name=mRNA_Ecto-sp13_S_contig9796.21447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1188bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9796:1018..5730+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |