mRNA_Ecto-sp13_S_contig9792.21443.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9792.21443.1
Unique NamemRNA_Ecto-sp13_S_contig9792.21443.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: D8LQ11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ11_ECTSI)

HSP 1 Score: 529 bits (1362), Expect = 5.850e-187
Identity = 259/262 (98.85%), Postives = 261/262 (99.62%), Query Frame = 1
Query:    1 LEARGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRLQRDDAAGD 786
            LEARGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYSRLVSEIDAVGWSHLVSMDSLL SVQLRERDAAGREHVFA+SLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKAD+SADCGICYAYRLQRDDAAGD
Sbjct:   55 LEARGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLTSVQLRERDAAGREHVFAISLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADYSADCGICYAYRLQRDDAAGD 316          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: A0A835YLD4_9STRA (WD-repeat region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD4_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.620e-87
Identity = 150/282 (53.19%), Postives = 180/282 (63.83%), Query Frame = 1
Query:    1 LEARGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREA-----------------YERNLFR-WNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRLQRDDAAGDGG 792
            L + G    LR RLAQT D   F+AEL DVL+++LR+ P+  P PA +YSRLV+EID VGW HLV++   L  +QLR  DAAGR HV  V++P +YP + P C  DLP    L+W  GQSSLA VL QFR AL PF  LW VLDDLD HT VLEPE  SR+   RRVA+A HCS+ L ++P AP   PEVRFLG+QA + P + A                 +  N  R W+ S L+RANLEAAL   LPSPATT + D S DCGICY YRL   DA+G GG
Sbjct:   66 LTSAGALPALRLRLAQTPDPASFVAELQDVLQRLLRAAPQSAPAPAAYYSRLVAEIDKVGWEHLVTISERLSHLQLRVSDAAGRHHVIGVTMPPDYPRTAPTCVADLPAPFALQWRAGQSSLADVLGQFRAALAPFLPLWEVLDDLDAHTHVLEPEHRSRAIAQRRVALAPHCSLSLALNPLAPRAAPEVRFLGAQASLAPFKAAVRCAXXXXXXXXXXXXAFAANAPRTWDPSRLLRANLEAALGAPLPSPATTLREDISGDCGICYQYRLA--DASGGGG 345          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: A0A2R6WJG8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WJG8_MARPO)

HSP 1 Score: 227 bits (579), Expect = 2.280e-69
Identity = 113/261 (43.30%), Postives = 160/261 (61.30%), Query Frame = 1
Query:   10 RGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRLQRDDAAGDGG 792
            RGV   ++ RL Q+ D+  F+ EL D+LE+++R+ P    P   FYS+L + +D+VGW HL+ +   L S+ LR  D+AGREH+  V LP  +P   P  S +LP  ++LR   G+S L  ++ Q+  A+  + + W+V++D+DK  WV+EP+ PSR+   RR+A+  HCS+ + +DP +P  VPE RF GS AVI PLR      L +W+ S  + AN E  LE+  PS   T K D SADCGICYAYR Q D    D G
Sbjct:   56 RGVEPVVQERLKQSYDLSTFVLELKDILERIVRTQPFVSLPTPAFYSQLCANLDSVGWEHLIWLSDELSSLHLRIFDSAGREHIVLVDLPPGFPEVAPTASANLPIPVDLRSLQGES-LKDIILQYESAIETYQDFWDVMEDVDKRVWVMEPDHPSRADAFRRIALGGHCSLSIVVDPLSPRSVPECRFFGSDAVISPLRRRLNSGLRKWDRSRPLIANFEEVLEITFPSAQETDKEDMSADCGICYAYRAQDDALCSDVG 315          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: H3AM62_LATCH (Uncharacterized protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AM62_LATCH)

HSP 1 Score: 224 bits (572), Expect = 2.040e-68
Identity = 111/252 (44.05%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   10 RGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPK-QDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRL 762
            RG    ++ RL    D+  FM EL  VLE  L+S  +   PPP ++Y +L+ EI+++GW  L   D+ L +++L+  D+AGREH+  V L +NYP  PP CSVD P    + W+P QSSL  +  QF  AL    E W+ +D++D+ TWVLEPEKP+RS+T RR+A+  + SV +++DPR P  +PE  FLG+  ++ PLR+    N+  WN    V  NL+  LE+  PSP    K++FS +CGICYAYRL
Sbjct:   57 RGYHQIIKQRLQHCSDLVSFMLELKTVLEIALKSRHELYAPPPPQYYLQLIKEIESLGWDKLAYTDTELSTIRLKVVDSAGREHLITVKLKANYPAEPPACSVDFPVPFLISWTP-QSSLINIHSQFLAALEVLKEFWDTMDEIDEKTWVLEPEKPTRSSTMRRIAIGTNVSVNIEVDPRHPNMLPECCFLGADHMVTPLRDKLNSNMHLWNPDCSVFQNLKDVLEIDFPSPTNHEKSNFSIECGICYAYRL 307          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: A0A665TRS0_ECHNA (FA complementation group L n=3 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665TRS0_ECHNA)

HSP 1 Score: 224 bits (571), Expect = 3.230e-68
Identity = 108/253 (42.69%), Postives = 165/253 (65.22%), Query Frame = 1
Query:   10 RGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPK-QDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRLQ 765
            RG    ++ RL Q+ D+  FM EL  V+E  L+S P+    PP ++YS+L+SE++ +GW  L+S+D+   +++L+ +D+AGR+H+  + L S +P   P CS DLP  L + W+P QS+LA +  QF   L    E W+VLD++D+ TW+LEPEKPSRS T RR+A+  + S+ +++DP+ P  +PE   LG++ V+ PLR     N+  WN    +  NL+  LE++ PSPAT  K+ FS +CGICY+YRL+
Sbjct:   61 RGYEHIVKQRLQQSADLVSFMLELKTVMEVGLKSRPECSSIPPPQYYSQLISEMETLGWDKLLSIDTEFQTLRLKVQDSAGRQHILIIKLKSKHPAEAPECSADLPLPLLITWTP-QSTLAQIHHQFLLVLESLTEFWDVLDEIDRQTWILEPEKPSRSDTMRRIAIGNNVSIKVEVDPKHPKMLPECCLLGAELVVTPLRNKLNANMHLWNPDSSLLLNLQDVLEIEFPSPATHEKSAFSVECGICYSYRLE 312          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: A0A6J2V969_CHACN (E3 ubiquitin-protein ligase FANCL n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2V969_CHACN)

HSP 1 Score: 221 bits (563), Expect = 4.860e-67
Identity = 112/252 (44.44%), Postives = 160/252 (63.49%), Query Frame = 1
Query:   10 RGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPK-QDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRL 762
            RG    ++ RL Q+ D+  F+ EL  V E  L+  P+ Q  PP ++YSRL++E++A+GW  L+ +D+   +++L+  D++GR+H   V L   YP   P CS DLP  L + W+P QS+LA +  QF  +L    E W+VLD++D+ TWVLEPEKP+R+ T RR+A+  + S+ ++IDPR P  +PE   LG++ V+ PLR     N+  WN  L V  NL   LE  LPSPAT  K+ FS +CGICYAYRL
Sbjct:   62 RGYQQIVKQRLHQSPDLVSFILELKAVTEVALKHRPECQTIPPPQYYSRLITEMEALGWDKLLFIDTEFRTLKLKGEDSSGRQHAITVHLKPEYPAEAPECSADLPVPLTITWTP-QSTLAHIHSQFLLSLEALSEFWSVLDEIDQQTWVLEPEKPTRADTMRRIAIGNNVSIKVEIDPRHPRMLPECCLLGAEHVVTPLRNRLNVNMHLWNVHLSVLQNLRDLLETDLPSPATHEKSSFSMECGICYAYRL 312          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: UPI000443C52D (E3 ubiquitin-protein ligase FANCL isoform X2 n=3 Tax=Poecilia TaxID=8080 RepID=UPI000443C52D)

HSP 1 Score: 221 bits (564), Expect = 8.710e-67
Identity = 109/247 (44.13%), Postives = 155/247 (62.75%), Query Frame = 1
Query:   28 LRARLAQTEDVEGFMAELTDVLEKVLRSCPK-QDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRLQ 765
            ++ RL Q+ D+ GF+ EL  VLE  L  CP+ +  PP  +YS L+SE++ VGW  ++S+D    +++LR  D++GR+H   V L S +P   P CS DLP  L + W+P QSSL  +  QF   L    + W+VLD++D  TWVLEPEKPSRS T RR+A+  + S+ +++DPR P  +PE   LG+  V+ PLR     N+  WN    V  NL   LE++ PSPAT  K+ F+ +CGICY+YRL+
Sbjct:   60 VKQRLQQSVDLGGFILELKTVLEVALNRCPEGRSVPPPRYYSLLISEMETVGWDKMLSIDMDFQTLKLRAEDSSGRQHTLTVKLKSKHPAEAPDCSADLPVPLTITWTP-QSSLEQLHSQFLLVLESLTDFWDVLDEIDGKTWVLEPEKPSRSDTMRRIAIGNNVSIKVEVDPRHPKMLPECCLLGADHVVTPLRNKLNANMHMWNPDSSVLNNLRDVLEIEFPSPATHEKSSFNVECGICYSYRLE 305          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: A0A8D0C8Y2_9SAUR (FA complementation group L n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0C8Y2_9SAUR)

HSP 1 Score: 219 bits (559), Expect = 2.220e-66
Identity = 104/251 (41.43%), Postives = 155/251 (61.75%), Query Frame = 1
Query:   13 GVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQ-DPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRL 762
            G    L+ RL  + D+  FM E   +LE  +++  +   PPP ++YS L+ EI+A+GW  +V +D    +++L+  D++GR+H+  + L + YP  PP+C VDLP   ++ W P QSSL ++  QF   L    E W  LD++D+ TWVLEPEKP+RS T RR+A+ ++ SV +++DPR P   PE  FLG+  V+ PL+     N+  W+  + +  NL+  LEL  P+  T  K+DFS DCGICYAYRL
Sbjct:   65 GYQQILKQRLQHSSDLVSFMVEFKTILEVAVKNTQEMCAPPPPQYYSGLIGEIEALGWDKVVFVDPSFNAIKLKAEDSSGRDHLITLKLNAKYPAEPPVCIVDLPIPFSVSWIP-QSSLLSIHSQFLAVLESLKEFWKALDEIDEKTWVLEPEKPARSATMRRIAIGKNVSVNIEVDPRHPTMFPECYFLGADHVVNPLKSKLNNNIHMWDPEISLLQNLKEVLELDFPTRETLEKSDFSMDCGICYAYRL 314          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: A0A8D3B0G7_SCOMX (FA complementation group L n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3B0G7_SCOMX)

HSP 1 Score: 219 bits (558), Expect = 2.890e-66
Identity = 107/253 (42.29%), Postives = 164/253 (64.82%), Query Frame = 1
Query:   10 RGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPK-QDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRLQ 765
            RG    ++ RL Q+ D+  F+ EL  VLE  L+S P+    PP ++YS+L++E++ +GW+ L+ +D+ L +++L+  D++GR+H+  + L S +P   P CS DLP  L   W+P QS+L  + +QF   L    E W+VL+++D +TW+LEPEKPSRS T RR+A+  + S+ +++DPR P  +PE   LG++ V+ PLR     N+  WN    V  NL   LE++ PSPAT  K+DFS +CGICY+YRL+
Sbjct:   61 RGYEHIVKQRLQQSADLVTFLLELKTVLEVGLKSRPECSSIPPPQYYSQLIAEMETLGWNKLLFIDTELRTLRLKAEDSSGRQHILTIKLKSKHPAEAPECSADLPLPLATTWTP-QSTLQQLHDQFLVVLESLTEFWDVLEEVDGNTWILEPEKPSRSDTMRRIAIGNNVSIKVEVDPRHPKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDSSVLRNLRDVLEIEFPSPATHEKSDFSTECGICYSYRLE 312          
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Match: A0A3B5QDR7_XIPMA (RING-type domain-containing protein n=23 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3B5QDR7_XIPMA)

HSP 1 Score: 220 bits (561), Expect = 2.950e-66
Identity = 106/247 (42.91%), Postives = 156/247 (63.16%), Query Frame = 1
Query:   28 LRARLAQTEDVEGFMAELTDVLEKVLRSCPK-QDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICYAYRLQ 765
            ++ RL Q+ D+ GF+ EL  VLE  L  CP+ +  PP  +YS+L+SE++ VGW  ++ +D    +++LR  D++GR+H   V L S +P   P CS DLP  L + W+P QS+L  +  QF   L    + W+VLD++D+ TWVLEPEKPSRS T RR+A+  + S+ +++DPR P  +PE   LG+  V+ PLR     N+  WN    +  NL   LE++ PSPAT  K+ F+ +CGICY+YRL+
Sbjct:   67 VKQRLQQSVDLGGFILELKTVLEVALNRCPEGRSVPPPRYYSQLISEMETVGWDKMLFIDMDFQTLKLRAEDSSGRQHTLTVKLKSKHPAEAPDCSADLPVPLTITWTP-QSTLEQLHSQFLLVLESLTDFWDVLDEIDRKTWVLEPEKPSRSDTMRRIAIGNNVSIKVEVDPRHPKMLPECCLLGADHVVTPLRNKLNANMHMWNPDSSILNNLRDVLEIEFPSPATHEKSSFNVECGICYSYRLE 312          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9792.21443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ11_ECTSI5.850e-18798.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLD4_9STRA1.620e-8753.19WD-repeat region-domain-containing protein n=1 Tax... [more]
A0A2R6WJG8_MARPO2.280e-6943.30Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
H3AM62_LATCH2.040e-6844.05Uncharacterized protein n=2 Tax=Latimeria chalumna... [more]
A0A665TRS0_ECHNA3.230e-6842.69FA complementation group L n=3 Tax=Echeneis naucra... [more]
A0A6J2V969_CHACN4.860e-6744.44E3 ubiquitin-protein ligase FANCL n=1 Tax=Chanos c... [more]
UPI000443C52D8.710e-6744.13E3 ubiquitin-protein ligase FANCL isoform X2 n=3 T... [more]
A0A8D0C8Y2_9SAUR2.220e-6641.43FA complementation group L n=2 Tax=Salvator merian... [more]
A0A8D3B0G7_SCOMX2.890e-6642.29FA complementation group L n=1 Tax=Scophthalmus ma... [more]
A0A3B5QDR7_XIPMA2.950e-6642.91RING-type domain-containing protein n=23 Tax=Cypri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9792contigEcto-sp13_S_contig9792:951..6161 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score531.9
Seed ortholog evalue1.6e-148
Seed eggNOG ortholog2880.D8LQ11
Preferred nameFANCL
Model size792
KEGG koko:K10606,ko:K17426
KEGG Pathwayko03460,ko04120,map03460,map04120
KEGG ModuleM00413
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006464,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007276,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016567,GO:0016604,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0019953,GO:0022414,GO:0031625,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032446,GO:0032501,GO:0032504,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0036297,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043240,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0046483,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051716,GO:0061630,GO:0061659,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564
Exons7
EggNOG free text desc.protein monoubiquitination
EggNOG OGsKOG3268@1,KOG3268@2759
Ec32 ortholog descriptionFanconi anemia complex, subunit FancL, WD-repeat containing domain
Ec32 orthologEc-15_001360.1
EC2.3.2.27
Cds size792
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03400,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9792.21443.1prot_Ecto-sp13_S_contig9792.21443.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9792 951..6161 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464243.0345478-CDS-Ecto-sp13_S_contig9792:950..11041681464243.0345478-CDS-Ecto-sp13_S_contig9792:950..1104Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9792 951..1104 -
1681464243.0476937-CDS-Ecto-sp13_S_contig9792:1836..19161681464243.0476937-CDS-Ecto-sp13_S_contig9792:1836..1916Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9792 1837..1916 -
1681464243.0579128-CDS-Ecto-sp13_S_contig9792:2720..28551681464243.0579128-CDS-Ecto-sp13_S_contig9792:2720..2855Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9792 2721..2855 -
1681464243.0681205-CDS-Ecto-sp13_S_contig9792:3966..40481681464243.0681205-CDS-Ecto-sp13_S_contig9792:3966..4048Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9792 3967..4048 -
1681464243.0849845-CDS-Ecto-sp13_S_contig9792:4868..49621681464243.0849845-CDS-Ecto-sp13_S_contig9792:4868..4962Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9792 4869..4962 -
1681464243.1025097-CDS-Ecto-sp13_S_contig9792:5403..55511681464243.1025097-CDS-Ecto-sp13_S_contig9792:5403..5551Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9792 5404..5551 -
1681464243.1121418-CDS-Ecto-sp13_S_contig9792:6062..61611681464243.1121418-CDS-Ecto-sp13_S_contig9792:6062..6161Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9792 6063..6161 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9792.21443.1

>prot_Ecto-sp13_S_contig9792.21443.1 ID=prot_Ecto-sp13_S_contig9792.21443.1|Name=mRNA_Ecto-sp13_S_contig9792.21443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
LEARGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYS
RLVSEIDAVGWSHLVSMDSLLMSVQLRERDAAGREHVFAVSLPSNYPHSP
PICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHT
WVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIG
PLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADFSADCGICY
AYRLQRDDAAGDGG
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mRNA from alignment at Ecto-sp13_S_contig9792:951..6161-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9792.21443.1 ID=mRNA_Ecto-sp13_S_contig9792.21443.1|Name=mRNA_Ecto-sp13_S_contig9792.21443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5211bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9792:951..6161- (Ectocarpus species13 EcNAP12_S_4_19m)
TTGGAGGCCAGGGGGGTCTGGGACACCCTTCGCGCGCGGCTGGCGCAGAC GGAGGACGTCGAAGGCTTCATGGCGGAGCTCACGGATGTGCTAGAGAAGG TACGAGCGCTGCGCGCTTGGCACGCGCTTGACGCTCGCTGGTCGTGGGAA TCCCCCTGGAAAACACCATTGTTTCGGAAGCGAGACGGGAATTCCTTGCT GCCCGATGGCGTACCCAAGAGAGCACAGCCCTTGTTCATCAGGCATAGTC TGCGCGAATAGCGGGCTCGGTAGGGTAAGGGAGGAGGGGGATTTGCGAGG CAGTACAAGGACTCATTGTTGCTTGCGGCAAGTGGTCTTGGCCGTTGAAT GTGCGTTAGGCGGGGTAATGATAGCAGTGGATGAGCTTCGCGGACCTTGG AGAGAGACGATGAGACCTGTTTGTGAAGCGACCAGTCAGGGAGAGAGAGA GAGAGAGATACAGAGAGACAGCGAGAGGGATGGACAGACATGTAAGCAGA CTGGCTGACCGCTATGACAGACAGGTCCCCAGATAGACAGAGAACACACA CACGGAGGCGCCGGTGTTGTGACGTGCGAGATGACGTGTTTGCTTACATG CATGCCGCAGGTTTTGCGTTCGTGCCCGAAGCAGGACCCGCCCCCGGCAG AGTTCTACTCGAGGCTGGTGTCCGAGATAGACGCCGTCGGCTGGTCGCAC CTCGTGTCGATGGACTCGTTGCTGATGTCCGTCCAGCTCAGGGAGAGAGA CGCTGCAGGTAAAGGCTGCAGACTGTTAGTTTTGTGTTGGTGTTGTCTAG GCCACAGTAGTATGGGTTGGTGTTGTCGCTGCTGCTGGCGAACCATGACG CCGTTGTTGCTGCTGGTTGTGGTGATTCTTGCAGGGATATTTGGTTTATG GTATCCGTATGTGGTCATGTCGCTTGGAGAGGGGTGCATGGTCGAAAGCG GCAAGCAACAATACATACCCCCCAAAACCCCCCTCGGGCAGCTTGCTGAA CCCCTCGCGGAGATTTTCACTTGATCCAAATGCTTTCCTGCTTGTCGGGC CTAGGTTGGTGAAGAACCCCCCCCACACCCCCGTGGTATTGTGGCTTAGA CGGGAAGGCGCACGCCCTGCTAGTCGCGCACGAGAGGGAGAATAGCTCGC CACCACCCACCCAGCCTCCTCCCGTTGTCCACCCTCTCGTTCACCGCAGG ACGGGAGCACGTCTTCGCGGTTTCCCTCCCGAGCAATTACCCACACAGCC CGCCCATCTGCTCAGTCGACCTCCCGACCCACCTCAATCTCAGGTCTGTT TTTTGGGGGTTTGCTGGAAGGGTGCGGGTGGGGTGCTTACAACTCCACCG TACACGACAACATGCAAAATCATGACATGTGTTTGGGGTGTTCGCAGAAA ACGACCGGTGTTTTAAGTCCTCCGGGCGCAACTTAGAGGAGGACTGCTTC CATACCGTACATGACATCTCTTTGGGACGCAAACAACACTGGGCATGTGT TTGGGGGTCCATAGACAACGACAGGAGTTTCTCCGGATACACCTGGGGGG ATGGAGATAGGCTTTGCCTGTGTTTGTCTACGAGGAGTTGCGTCCCTACC GAAACTTATCGCGGGTCTATTTGCCACTGACACTCGTGAAGCACCACACG AACAAGAAGGCCTGGCTCACGCAACGTTAGTTTTGTCACGAAGCTTTCGA TCCATGCGACGACGCTTGATGGTGGTCCGTGCGTACACGTCCTGACGGTA GGGCTCGATTGTTCGACGCCCTCATGATCGTTCCGGGTGTCAGTCGCTCC CTCTCCTGTTCCCCACCCAACGCGTGCCTTTCACGTGTGTGAATCGCGCA CGAACAACACCTCTTGGCGTAGACCTCACTTCCAGCTTTCAACTGTTACG GCGTTTTATTATCTCCCTTGAGGGTACTACAAAATGCATGGCGAAACAGA AAAGGGTACAACCCAGTCGAGATAGAGGGGATGCGTATCTACAATGAGGG TCGAGTGGCACCTGGCGGATGTAAATGGACTTGATTGAGCCGGTTGTACG CCCCATGCACTTAGAAACCACCCTGACGGCGCCAACCAACCGCCGAAAAA AAACATTTCGCAGATGGTCGCCCGGTCAGAGCTCTCTGGCGACGGTGCTG GAACAGTTCCGGGAGGCGCTGACACCCTTCCACGAGCTGTGGAACGTAAG TGTCTGTTGCGTGTGGTGTAGGACGAGCTTCGTTTTTTTGTCGAGGATGA ATCGCGCCGAGCGGCGGAAGGGTCTGCCGCGGGTGGCATAGAACGAGCTT TGGTTTCAGTCAAATGTTTCTCGCGTAGGACGGGGGGTGACTCGCAGCAA GTAGTACTGCTTGTGGAGAGTGGGGGCAAGGGAAGTGGAGGATTCGTTCG GTGCGGAGACCGTCTGTGGAGGCGTTCTTTGCCGGTGCGTTGTGCTCAAG GCTTGTGGCCCTCCTTCATTATGCTGTGTTCGCAAGGGCTTGATCGGTCA ACTATGCCCGGGAAATTCTTGAAGAGGAGGAGACCCATCTGCTCCGAGTC TCTTGCACACACAGAACCCACGGGGGGGGGCGTGATGGATGCTGCTGAAC GGTTGTGCAAGTGGTACGGCACTCCAGCATGAACCATTCGTGGCAAGCCG CTGTCTTTGCCAGAAGTATCAGTGGTGACTAACTGTCAGGGTTTCTCGGA TAAACTGAGCAGCAACTTCATGAGAGGGTTTCTCAAACGCAAGGAACAGC TGGTTTGTTCGAGGCTGCAAGGACGAAGAGGCGAGACACCTTTTGCAGTG CTGCTGATTCGTCGTCGGTCTGCCTCGCCCAGGGTTGAATGTGTCTTTTC GGCTGACGCGCGTGCGTGCGTGCGCGTGGTACGTCAGTAGCCTTCGTGAG GGTATAGTTTGGTTGGAGAGGGGGTTACGGTTCAGGGTTAGGGTTACGAA ACCCCCCTCTCTACTTCACACATCACGCTTGACATCGTGGCGAACGTGGT CCGTGTACATGTTATCGGAATCCACATCCCGCGATGATTCTCCGGCAGGG CCTTGCACTGCTGCGGTGACGTTTCACTGTGAAGCTCTCGGTAGGAAGTG CGAGGAAAAACGGCCAACAGTCTCTCTATCTCTGCAAGGCATGCATCTTG TAGTATACTGCTGTGGTGATCTTAAACTGGTAGCTCCCGGTAGAACATGC GAGAAAAAACGGCCATCAAACAGCCTCTCTGCAATCTCTGCAAGGTACTC AAAGAGGCAACAAGTGTGAGTTAGTGCGTTGACCAGTGCTTGCGCGCTGA AACCAGGTCTTGGATGACCTCGACAAGCACACGTGGGTGCTGGAGCCGGA AAAGCCTTCTCGGTCCACCACCCACAGGAGGGTAGCCGTGGCGCGGCATT GCTCCGTCATGCTCAAGATCGACCCGCGAGCCCCCGGAGATGTGAGAGGA CCGCTGTAGCACGAAAGTTGTAGGCGAACATATACGCACTAGGAATGGTC CATCCCGTACACACGAAGACAGAATACGGCATGCTAGCCGTAGAAATGGT CGAGAACAAAGGGGTTTTCGCTCTTGTCGATCTAGTGACGGGAAGCTTGT ATTTTTTGGGAGCGGAAGAAGTGCGGGGGAAGAATGTCGGTGAAGAGCCT TTAGCCACCCCATGGAGACAGATGTAACATGTAGTGGTGTTAGTGTATAG GTAACGGAATGTCGCCATGAACGATTGTCGTTGTGACCCTGTTTGGCAAA GCCCCCCGCCGCCGTGTTCTCTCGGTGGAAGTGTTGTGATTTGAGCTGTG TCGTTTGTTGATGCGGGTTCTGTGGTTTTATGCAAAGGTCCGTGTTTGTT GTCGAGCGCGTCAGTGCTCGCATTCTCGGTGCGAAATCGGCTTTGAGATC GGCCTAAGAACGCCATCCACAACAATCAAAGTTGCTGCTTGTTAAATCCG CCGCTTCTGCTGTACAGCAAGAGGCATGAGACAAAAACACCCTCTGGATA GGTCGGCAAATAGTTTTCGACCTCATTTGTCCTCGTTCAAACCTGACCTG CAGCAGTCAACAGCAGAAGCGAGATTTTTCTGTCGGCGTTCTTTATTGGC GTTCTATCACGATCGATTTGTTTCGCGATCGGTCAGCACAAACGACTCCA CCCCGTCCCCTATTCGTGGTTTAAGAGAGATTAAGTGCGATGGCTCAAAG GAACATTTCGGCGTCTTGCGTGTTTTCTGTTTGTCTGCTGGACAGGTTCC AGAGGTCCGGTTCTTGGGGTCCCAGGCCGTGATTGGCCCGCTCAGGGAGG CTTACGAAAGAAATCTCTTTCGATGGTGAGTGCTTGGTCAACACCCCTCT TTAACCAACTTTCCTAGCTCAATGTCTGCAAGGAAAGAATATGGTACGCG TCGGAGGATGCGGTTTGAAAGCATTTTGTTGAAGAGTCAAGGCTTCCCAA GACGTATCGTGGTGCGGTTGGCAACCGTCCTTTTGTTGCAGAGGGACATA GTTTCCAAGAATTGACCTGCATGCGGGTTACGACACGTTATCTTCGGTGT GAATTTATCCGATCAACTCGGTTCACTTACGGTGGCGTACGTAATGGAAA CAATCACTTTGTTGTGGGATCTCGGTGGCGCGTGAACCGCTGCTGTCAAC AAAATACAAGAGCCCGTATACCAACGAATGTGTGCACGGAGAATTACACA AACCAACACATGCGTCGACTCAATCAATTTATACATGCAAAGATAATTGC AGAACCCAACACATGCGTGGGCTCGATCAATGTGTGCAAGGAGAAATACA CAACCAAAGCACACACCTCCCACACATGCGTGGACTCAATCAACAACGTA CGCGAAGAAAATTTCACAACCCCAACACTCACCGCAACGCATGCGTTGAC TCCATCAACGTACGCAAGGACAATGTACAGAAGCCAACATACACACGCCC CCACCACATGCTGCATGGACCATAAACCCCCCAAAAATGATGACAAACAC CACCACCACCGCTACCGCAAAAAAAACTAACCCTGACCCTTACCCTAATA TACTCAGGAATCACTCCCTGCTCGTTCGGGCCAACCTCGAGGCTGCGCTG GAGCTGAAGCTGCCTTCCCCGGCCACTACCGCCAAGGCGGACTTCAGCGC GGACTGCGGCATCTGCTACGCCTACCGCCTCCAGCGGGACGACGCGGCTG GCGATGGGGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9792:951..6161-

>mRNA_Ecto-sp13_S_contig9792.21443.1 ID=mRNA_Ecto-sp13_S_contig9792.21443.1|Name=mRNA_Ecto-sp13_S_contig9792.21443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9792:951..6161- (Ectocarpus species13 EcNAP12_S_4_19m)
TTGGAGGCCAGGGGGGTCTGGGACACCCTTCGCGCGCGGCTGGCGCAGAC
GGAGGACGTCGAAGGCTTCATGGCGGAGCTCACGGATGTGCTAGAGAAGG
TTTTGCGTTCGTGCCCGAAGCAGGACCCGCCCCCGGCAGAGTTCTACTCG
AGGCTGGTGTCCGAGATAGACGCCGTCGGCTGGTCGCACCTCGTGTCGAT
GGACTCGTTGCTGATGTCCGTCCAGCTCAGGGAGAGAGACGCTGCAGGAC
GGGAGCACGTCTTCGCGGTTTCCCTCCCGAGCAATTACCCACACAGCCCG
CCCATCTGCTCAGTCGACCTCCCGACCCACCTCAATCTCAGATGGTCGCC
CGGTCAGAGCTCTCTGGCGACGGTGCTGGAACAGTTCCGGGAGGCGCTGA
CACCCTTCCACGAGCTGTGGAACGTCTTGGATGACCTCGACAAGCACACG
TGGGTGCTGGAGCCGGAAAAGCCTTCTCGGTCCACCACCCACAGGAGGGT
AGCCGTGGCGCGGCATTGCTCCGTCATGCTCAAGATCGACCCGCGAGCCC
CCGGAGATGTTCCAGAGGTCCGGTTCTTGGGGTCCCAGGCCGTGATTGGC
CCGCTCAGGGAGGCTTACGAAAGAAATCTCTTTCGATGGAATCACTCCCT
GCTCGTTCGGGCCAACCTCGAGGCTGCGCTGGAGCTGAAGCTGCCTTCCC
CGGCCACTACCGCCAAGGCGGACTTCAGCGCGGACTGCGGCATCTGCTAC
GCCTACCGCCTCCAGCGGGACGACGCGGCTGGCGATGGGGGT
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