Homology
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
D8LL66_ECTSI (FYVE, RhoGEF and PH domain containing 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL66_ECTSI)
HSP 1 Score: 294 bits (753), Expect = 3.460e-95
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 2
Query: 287 MDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATKEVLIGGDATSLDSGEHVHFEVIVHETLGRAQASRGDAPPSVPVGPSSPRPGAATTGFGVGFSGKATWGEGGDA 730
MDDDSSPSCLLCDALFTFTNR HHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATKEVL+GGDA SLDSGEHVHFEVIVHETLGRAQASRGDAPPSVPVGPSSPRPGAATTGFGVGFSG+ATWGEG DA
Sbjct: 1 MDDDSSPSCLLCDALFTFTNRGHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATKEVLVGGDAASLDSGEHVHFEVIVHETLGRAQASRGDAPPSVPVGPSSPRPGAATTGFGVGFSGRATWGEGDDA 148
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
A0A7S3YBR7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBR7_HETAK)
HSP 1 Score: 82.4 bits (202), Expect = 8.800e-16
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 2
Query: 284 WMDDDSSPSCLLC-DALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATKEVLIGGDA 535
WM+D+ S +CL+C D TFTNRRHHCR CL+LVCSACSS +E S S + +RVCD CY TL +EV + G A
Sbjct: 17 WMEDNESSTCLVCMDPFTTFTNRRHHCRYCLRLVCSACSSRTLVIEQQNSTSAPSKDQTP--QRVCDHCYVTLSEAREVEVVGGA 99
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
A0A8J2X087_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X087_9STRA)
HSP 1 Score: 72.0 bits (175), Expect = 1.240e-10
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 284 WMDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMWKLE 418
WMDD +S CLLC F+FTNRRHHCR+C +LVC ACSS +LE
Sbjct: 6 WMDDGASQHCLLCHQAFSFTNRRHHCRSCARLVCGACSSRSMRLE 50
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
A0A835ZPU8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPU8_9STRA)
HSP 1 Score: 72.4 bits (176), Expect = 4.160e-10
Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 2
Query: 284 WMDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMW 409
WMDD S CLLCD FTFTNRRHHCR+C KLVCS+CS +
Sbjct: 34 WMDDKDSEVCLLCDQAFTFTNRRHHCRSCFKLVCSSCSGQQF 75
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
A7RK38_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RK38_NEMVE)
HSP 1 Score: 67.4 bits (163), Expect = 5.500e-10
Identity = 38/90 (42.22%), Postives = 46/90 (51.11%), Query Frame = 2
Query: 284 WMDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLV-ATKEVLIGGDATSLDS 550
W+ D+S C+LCDALFT T RRHHCRAC + C+ACS N LE R RVC C LV K+ I S+D+
Sbjct: 13 WIRDESVTMCMLCDALFTLTRRRHHCRACGGIYCNACSHNKAPLEY----------RDGKLCRVCRSCREILVHGVKKTPIEQKTASIDT 92
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
UPI00158B4FB1 (zinc finger FYVE domain-containing protein 16 isoform X1 n=5 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158B4FB1)
HSP 1 Score: 72.4 bits (176), Expect = 6.250e-10
Identity = 35/86 (40.70%), Postives = 48/86 (55.81%), Query Frame = 2
Query: 284 WMDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATKEVLIGGDATS 541
W+ D +P+C+LCDA FT RRHHCRAC K++CS C + +KLE ++ RVC CY L+ T+ GD +S
Sbjct: 802 WVPDSEAPNCMLCDARFTVIKRRHHCRACGKVLCSKCCNLKYKLEYQKN----------VESRVCSTCYLQLIRTESEHGSGDWSS 877
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
A0A3Q3NLT3_9TELE (FYVE, RhoGEF and PH domain-containing protein 6-like n=2 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3NLT3_9TELE)
HSP 1 Score: 72.0 bits (175), Expect = 8.030e-10
Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 2
Query: 284 WMDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATKEVLIGGDATSLDSGEHVHF 568
W+ D + C++C FT T RRHHCRAC K+VC ACSSN + LE + + RVCD+C+ L E+ + +T++ SG F
Sbjct: 1102 WIPDPRTTMCMICTCEFTLTWRRHHCRACGKVVCQACSSNKYCLEYLKMQ----------LARVCDQCFSVLQQKNEIAL---STAVSSGNRTAF 1183
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
A0A3B4EZ92_9CICH (FYVE, RhoGEF and PH domain-containing protein 6-like n=1 Tax=Pundamilia nyererei TaxID=303518 RepID=A0A3B4EZ92_9CICH)
HSP 1 Score: 69.7 bits (169), Expect = 4.280e-9
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 2
Query: 284 WMDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATK 511
W+ D + C++C + FT T RRHHCRAC K+VC +CSSN + LE +++ F RVCD+C+ L+ K
Sbjct: 917 WIPDKRASMCMVCTSKFTQTWRRHHCRACGKVVCQSCSSNEFPLEYKKNK----------FTRVCDQCFQVLLEQK 982
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
A0A3B4DI35_PYGNA (FYVE, RhoGEF and PH domain containing 6 n=5 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4DI35_PYGNA)
HSP 1 Score: 69.3 bits (168), Expect = 5.870e-9
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 2
Query: 284 WMDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTL 499
W+ D + C++C FT T RRHHCRAC K+VC ACSSN + LE +++ RVCD CYG L
Sbjct: 1090 WIPDLRTTMCMICTCEFTLTWRRHHCRACGKVVCQACSSNKYYLEYLKNQ----------LARVCDHCYGKL 1151
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Match:
A0A067QX41_ZOONE (Zinc finger FYVE domain-containing protein 9 (Fragment) n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QX41_ZOONE)
HSP 1 Score: 68.9 bits (167), Expect = 6.170e-9
Identity = 36/94 (38.30%), Postives = 49/94 (52.13%), Query Frame = 2
Query: 284 WMDDDSSPSCLLCDALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATKEVLI------GGDATSLD 547
W+ D +P+C+ C+ FT RRHHCRAC K++CS C + +LE + + RVC CY TL K+V+ GGD T LD
Sbjct: 8 WVPDADAPNCMQCEIKFTVLKRRHHCRACGKVLCSKCCNMKSRLEYMDN----------SEARVCQPCYITLAKAKQVIFSDGIRPGGDLTELD 91
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig979.21441.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.46e-95 / Id = 96.62 Expect = 8.80e-16 / Id = 50.59 Expect = 1.24e-10 / Id = 64.44 Expect = 4.16e-10 / Id = 69.05 Expect = 5.50e-10 / Id = 42.22 Expect = 6.25e-10 / Id = 40.70 Expect = 8.03e-10 / Id = 37.89 Expect = 4.28e-9 / Id = 42.11 Expect = 5.87e-9 / Id = 45.83 Expect = 6.17e-9 / Id = 38.30 Sequence D8LL66_ECTSI A0A7S3YBR7_HETAK A0A8J2X087_9STRA A0A835ZPU8_9STRA A7RK38_NEMVE UPI00158B4FB1 A0A3Q3NLT3_9TELE A0A3B4EZ92_9CICH A0A3B4DI35_PYGNA A0A067QX41_ZOONE
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Metazoa
Stop 1
Start 1
Seed ortholog score 68.9
Seed ortholog evalue 5.7e-09
Seed eggNOG ortholog 303518.XP_005728150.1
Preferred name FGD6
Model size 1177
KEGG ko ko:K05724
Hectar predicted targeting category other localisation
GOs GO:0001726,GO:0003674,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006996,GO:0007010,GO:0008150,GO:0008360,GO:0009987,GO:0012505,GO:0016043,GO:0019899,GO:0022603,GO:0022604,GO:0022607,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0031252,GO:0031267,GO:0042995,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046847,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051020,GO:0051128,GO:0051336,GO:0065007,GO:0065008,GO:0065009,GO:0071840,GO:0098772,GO:0120025,GO:0120031,GO:0120036
Exons 8
EggNOG free text desc. FYVE, RhoGEF and PH
EggNOG OGs 39MPV@33154,3CPA4@33208,3CS9X@33213,487XD@7711,48ZFE@7742,KOG1729@1,KOG1729@2759
Ec32 ortholog description Zinc finger, RING/FYVE/PHD-type
Ec32 ortholog Ec-24_002760.1
Cds size 1155
COG Functional cat. T
Best tax level Vertebrata
Best eggNOG OG NA|NA|NA
BRITE ko00000
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464242.6904078-CDS-Ecto-sp13_S_contig979:786..885 1681464242.6904078-CDS-Ecto-sp13_S_contig979:786..885 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig979 787..885 -
1681464242.7126682-CDS-Ecto-sp13_S_contig979:1254..1476 1681464242.7126682-CDS-Ecto-sp13_S_contig979:1254..1476 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig979 1255..1476 -
1681464242.7230096-CDS-Ecto-sp13_S_contig979:2352..2452 1681464242.7230096-CDS-Ecto-sp13_S_contig979:2352..2452 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig979 2353..2452 -
1681464242.7325833-CDS-Ecto-sp13_S_contig979:2906..3091 1681464242.7325833-CDS-Ecto-sp13_S_contig979:2906..3091 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig979 2907..3091 -
1681464242.7416027-CDS-Ecto-sp13_S_contig979:3974..4031 1681464242.7416027-CDS-Ecto-sp13_S_contig979:3974..4031 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig979 3975..4031 -
1681464242.7512693-CDS-Ecto-sp13_S_contig979:4987..5153 1681464242.7512693-CDS-Ecto-sp13_S_contig979:4987..5153 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig979 4988..5153 -
1681464242.7620144-CDS-Ecto-sp13_S_contig979:6122..6299 1681464242.7620144-CDS-Ecto-sp13_S_contig979:6122..6299 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig979 6123..6299 -
1681464242.7750313-CDS-Ecto-sp13_S_contig979:7664..7813 1681464242.7750313-CDS-Ecto-sp13_S_contig979:7664..7813 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig979 7665..7813 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464242.7893243-UTR-Ecto-sp13_S_contig979:7813..7835 1681464242.7893243-UTR-Ecto-sp13_S_contig979:7813..7835 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig979 7814..7835 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig979.21441.1
>prot_Ecto-sp13_S_contig979.21441.1 ID=prot_Ecto-sp13_S_contig979.21441.1|Name=mRNA_Ecto-sp13_S_contig979.21441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=385bp
MQALKWAAGIALGIDPEDSPGFRGGNRGRTESYSHIYDDDGPSFISNTAG RPRAGTTTGDSQTVSAARGVARGGVGRGNGRRGSRSGWMDDDSSPSCLLC DALFTFTNRRHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKR VCDKCYGTLVATKEVLIGGDATSLDSGEHVHFEVIVHETLGRAQASRGDA PPSVPVGPSSPRPGAATTGFGVGFSGKATWGEGGDAAAGGGGGAAPTPSA EAAPRLLGSDVLNRARAPYCRLTVASKQVGKTRPVPQSPSPAAPPTSAPP PSPFDSGDDAAIGVAGVSGSSSVGGQGHQCFDQNFLFRVSCACRTGDYLV LEVYDRAGGLSAGADPLLGHCRIPLYRVPRKRWG* back to top mRNA from alignment at Ecto-sp13_S_contig979:787..7835-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig979.21441.1 ID=mRNA_Ecto-sp13_S_contig979.21441.1|Name=mRNA_Ecto-sp13_S_contig979.21441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7049bp|location=Sequence derived from alignment at Ecto-sp13_S_contig979:787..7835- (Ectocarpus species13 EcNAP12_S_4_19m)GTGGTGGCCAGCTCCCCCAGCC ATGCAAGCACTCAAGTGGGCGGCAGGCA
TCGCTCTTGGTATAGATCCAGAGGATTCCCCTGGCTTTCGAGGTGGAAAT
CGAGGCCGTACCGAGAGCTATTCCCACATATACGACGATGATGGCCCAAG
CTTTATCTCCAACACTGCTGG GTAAGGGAAGGGATCCATCTGTGGGTTCA
CCCGTGAAGAGTACTGCCGTTTACGTCCTGTATGTAGCAGGCCGTATATA
TCCATTCAAAGAAACACCTCTTCCCGTGGAGAGGAGAGCAGGAGCGTAGT
GTGGAACGTTGGCAGTGCAGGGATTAGTAGATAACACAAGATGCTCCCTT
CCGCGGAAGCACGCATTTATTTCTGCTCAGGCGCGAGTTTATCTGCTGTG
TCCGCATTGCGCGATGCCATCTTGTCTCTGTAGTGTGTGCATTGTGTGAT
ATTCGCGGTGCTGTTTCTACTGGCTAGACTACCACTTAAAAGCTTTCAGC
TGAAGGTCTTCTCCCCAAATTGGATACACTGCTGAAGTCACGTCGATTTA
CCTCCTCCCGTCGTGTCGATGTTCATTTTTGTCGCCCGATTTGCGGCGAA
GTTTCTCTAGCAAGTTCGGTCGCTGCTGTATCAGTAATATATAGTTGTAG
GGTCTTTACCCATCTTTTCCTGCTCTGCCAAGAAATATTTACTCGTCTTG
TCCGAAGTGAACGTATCCGGGTGCTCGCTGTAGGTGGCGCGCTGATGCCA
CTAACAGGGCTTGTAATGCTGCATGCGAAAAGGGTGGGCAAGAGCTTTGG
GTGGGAGAACTTTGTTTTTCGTCGCTGTTGTGTTGGCAACGAAAAACACT
TTTGGCCGATAGCAGCAAGAACACAGCAGTAGCTGGTGTTATCGCATTAC
TTTTGGGTGTTTTTTTTTGTCTTCGTAGGTGTGTGTAGTGCACTGGCTTT
TTTGGGCGGTTTGCCTGTGACCAGGGAAGTCGTGCGCGTCAGTTGGACCG
GTACGGATGTAATGTTTTTTTTTTTTTGGCAGTAGCCTTTGAAGGGTTAA
AATTTGTTTTCGGGAAACATGCCGAATAAAGCATACAATCTGGGACATGA
GCTTAGGATTAGGGTTAAGGAATAGGTTCTGCGTACCTCCTCCCTGTTCT
ATTTCCTTGTAATACTTAATATCCCGCGAAGGCGGCGAAGGCGGTCCATT
TGTGGAGGTGGTACTGATCGCGCACGGAAGGAGTAAATCCCTGTGTACTC
ATCGCCCTGACTTCCGCACTCGGTACCACTTTTCTTCAATGCTCGAGAGC
ACAGATCTCACCGGCGGGAAGCGTCTTTGGATTCGTCGTCTAGATAATCA
AAGATATCACACGGCAGGTCTATTGTTGCTAACCGTGTACATGGCATCCT
TCGTCGCCGAATGTACGTACTACTGCTGTAGGTCAGATCGCATACTCATA
CAACAACAGCTACAAGAAATCTGAAGCAATCTTCCTGCGATGATACACGT
GAGATATTCACTTGGAGCACCGCTGCCCACGCTCAGGCGACCGCGCGCCG
GGACCACCACCGGCGATAGCCAAACGGTCTCCGCTGCTCGCGGTGTCGCA
AGGGGAGGAGTAGGACGAGGGAATGGCCGCCGTGGTAGTCGCAGCGGGTG
GATGGACGACGACTCTTCTCCTTCGTGTCTGCTTTGCGATGCTCTCTTCA
CCTTCACCAACAG GTAAATAGTAGGGGAGGGGGAATGTACCGCCCTTTGC
AGGACAGTATGCCTCTGTTCGTATTTCAACGTGTTCGTTGTTGTGCCGTA
CCGCTTGCTGCAGTTGGGATGTAGGGGTGGCTGCTGTACAACCGTCTTCT
GTCGTGTTTGTTATGGCACCGCTCCTGCAGCAGCACCCACTGTGCTCGAA
GGGATGTTCGCCCGCAGCACCCCGAGAAATTGTTTAGTTGCGACGAGCGC
GTCGTTTGGTCGGAGATGGTATGCATGGCCGTCGTGATTGTAGCCCTTGC
CGTTTGTCACCGCACCTTCCGTTACCGTAGTTACGACGCCGCCGTTGCAT
GTAACCCGGTGGTGCTAGGTAATAGATTGCGCACGGCATGTGCTCCCGAC
GCCTGGCCTGATAAGTGTCGATTCAATGCCTTCCAGCCATTACAGAGATG
CAAGATACTTGCCCACAATGTCCCCTCCTCTCGAGGACGAATGATCAATG
GTCTCACACCTATCAGGTAACAGCTGAGGCATGCAAAACATGAGTACGAT
TCCCTCGACTCTCTCTTTCTCCTCCCTGTCCTCCGCAACTCCTTGCAGCC
TCGATCGACAGTCCACAAGGACTCAGAACAAGCGTTTACCAATCGTGTGC
AGAGAGTTGGTGGGCCTTGCGTGAAAGCACAACGAATAGAGCCCGAAGGC
GGGCAGGGAGGCAGGCACAGCCCACCGTCTCTCTACAGACTCTTGCAACC
TGTCTTTCGCGCAAAGGCCGTTGAGGCGTTATTTTTTTTTTACGTCACTC
ACAGCAAGGTCCAACAATTTTGCCCCATGATCCTTTGCACGTCGACGGTC
AAAGGAGGGGGCTATTGCCGCATGTCGAAGTCTAGAATTACCTCTCAAGC
TTTTGCGGTTTGTGAGTCGCCATGAGCAATCCAAACTACAAGACCGCGTC
ACCCCCCCCCCCCGCCCCCCCCCCTACGACAGGCGGCACCACTGCCGCGC
CTGCCTGAAGCTAGTGTGCTCGGCGTGCAGCTCCAACATGTGGAAGCTGG
AGGCCGGGCGGAGCCGGGGCTACGGCAGCGCCGGGAGGCGCGCGGCCTTC
AAGCGCGTCTGCGACAAGTGCTACGGCACCCTCGTGGCTACCAAAGAG GT
GTGGCGTGCGGGTTCGGCTCTCACACACACGCAGTAGAAGCTCGATACGG
ACATACCGTAGGTGGCATGACGCAAGATATCACGCCCCTTGGACCGATTT
GTAGAGCTCTACTACTCCACGACGAACCGTAAGTGCCATAAAATATTACA
CACCCTGGACCGATACTCAGACCTTGGCTAAGTCAGTACTCCAGAGGCAG
AAAATCATACACATTGCGCACGATAAGTAGTCAGAAAGATGTTGACGAGA
CGGTTCCAACGCAGCCACTTTTCGGCACCACGCTACTCTTTCTGCTGTGG
AGAAACCGAGCTTTGAAAAGCGGTCCAGGGGGTGTGATATCGTACGTCAC
CTAGGGTGTCGTGCGTACCGGCGTGTGATTTCCGGCACCGTCGCTGGCTG
TACTGCCACTTTACGGTGACCAAAGTTTTTGTTTTCCTGTACCCTCAGTT
TTTCTTTGTTTTCTGTTCCTCGCCTTCGGCCTGTAGTAGGGTTCAGCGGA
GAATAAGTTGGTCGAGCACACGAGAGGGTGACGCGAGAGATGTGCTGTAT
ACGCCGCCGCCGCAGGCTGTGCGGTCGCCGCCTGCTCTCCAGTGGGGCCA
CTAAAGGGGAGGCTGTCCATGCATCGTTGCCCCACACGGCACCAAACGTT
GTGGGGACAAAGGCCACCGGCGTCCTTGTCGCCGGCTGAGAGTGTTGAAT
GTTTGCTCGACTGCGTCGGCCTGGAGGGATGGGGAGATAGAACGCTGCAC
GCCCCCACCTTGTCCGGTAAAAACCCGGCGTTCTCCGTTCCGGATGCGAG
GTCAATGGTGTAACGACTGTGGCATGCACGGCTATACGTACACCCCCCCC
CTCCCTCCCCCAGCGCACTTTCCACGCCCCCCCCCCCTGCCCTGATCGTT
GGCCCTCGCTCGCTCTCCCTTGTCGCCGATGCGTTGGTTGGTTGTTTCGT
GAAGGTGCTGATTGGAGGAGACGCGACTTCCCTCGACTCCGGCGAGCACG
TTCACTTCGAG GTACAGGCAGCGGAGGTCCCTCGATAGTGGTTGGTTTTC
CCCCGATAGTGGTTGGGGTCCCTCGATAGTGGTTGGTTATCCCTCAATCG
TTGTTGGGGTCCCTCGATAGTGGTTGGTTATTCCTCGATAGTGCCGGCGG
TTGAATACAGTGCCACTACCAAGCTGTAGCCTTCGCGAGGACATTTTCAA
CTTGGCTTTAGTAGAGGTTACGGGATGAGGTTGGGGATAGGGATACGCAC
CCCCCCCCCCCCCCCCCCCACACCTCTGTTTCATAGATTAATATCATATT
TCTCGCGAAGGCGGTCCTCCCCGGTATAGTAGTGCCGGTGAATTCCCGTG
ACACGGATGTAACGTCCAAGTTGTCTCGTTTCTCAAATTAGTGTCGGTTT
TCCGGTATTATTGTGCCCGTGGATCCGGCGGGTACGTGTACCGGCACTGC
TGGAGGGCCCCAGCCACTGAACGCATGTTCACGCCGTGGAGGCGACGTCA
GACATCACACCCCCTCAACCGATTTTCAAAGCTCGATCACTCCACGACGA
AGGAGGATGCCAAAGCTCAAGTAATGAGTTTTCGTAGAGATCTCGACGAG
ATGGCTCCAGCGGCGCCACTATTGGAACCGCCACATTTCTGTCTGATGTG
GAATAACAAAAAATCCCGCGTTGGAAATCAGTCCGTTCTTCATTCGTCGT
GGCGAGTGAGTTCCTGGTAGCAGCAAGTAATAATTTACGACCGAGCAGCC
AACGGTTGCGTGCGTAGTTTGTTTTGGTATATCGTACATGTTGTAAAGTG
ATGAAAATCAAGGAGAACGGATGTGCACCGTGCTTGCACTACATACGATC
CCCAAGCTCATGCTCCTTTCTTGGTTTTCGTATTCGCGCGAAAGGTGATC
GTGCACGAGACCTTGGGCAGAGCCCAAGCCTCCCGCGGCGATGCCCCTCC
CTCGGTGCCGGTGGGGCCGTCGTCTCCCCGACCGGGGGCGGCGACGACGG
GTTTCGGTGTCGGTTTCAGCGGAAAAGCGACGTGGGGGGAAGGGGGTGAT
GCTGCTGCTGGCGGCGGCGGTGGAGCCGC GTGAGTGTGGGGTCTGCTGCA
GACTGTTGGTGGTGTTGTTGTTGGTGATGTTATTATTGTTGTTTGTGGTG
GTGGTAGTGTTGCTGCTGCTGTTGTTGCTGCTGCTGTTCTTATTTTTGTT
GTTATTGTGGTTGTTGTTGTTGATGATGTTGTTGATGTTGTTGATATTGC
TATTGTAGGTGCTGCCGTCACATCTCCTGTGTTTGCAACCGATCAACGAA
CAAGCAGAAAAAAGCTCTCCTTTGCCGAAGCTCAGAAACCGGGCTGCAAA
GCGGGTACACTTCACACACCTATCAGCTTCCGGAATTCGCGCTGTTGCCA
CGAGAAGCTCAGCTTCATACTCATGTGCGGTTGAGTCGTCGTCACTCGCG
CTACCATATGCTATACTTGACATGATGTATTTTTAATCTTCTGTACCCTC
CGCCTCCCCTCAATGATATACGTTCTGCGACAGTCCCACCCCCAGCGCGG
AGGCAGCTCCAAGGCTGCTCGGGTCAGACGTGCTAAACCGTGCAAGAGCG
CCGTACTGCAGGCTGACGGTGGCGAGCAAGCAG GTGAAGGGAGCATAGGC
AAGCGGGCAGTAAGTACTCGCTTAGGTAGATGAAGAAGCGAACAGGGGGG
GGCGGGGGGGTTGTAGCGGTCCCCTTGAAATGGCGGAAGGTTTTCCCCAA
AAGATCATGTTACCCGTCGCATCACCACCCCTCCAAAGCTATAGCACGGA
AGCACGTTGGGCTAAGGGAAGCGGCGGAAGGGGGGGTAGTGGGGGGGTGA
TCTGCTCGTCGAACCACCATTGTTGTCATGGTAGAAAGGCTGACCCCAAG
ACATGGGTGCCGGGGGCAGCAATGGTGTGAGCCTCTGTGGTTCAGTTCGT
CGCGTACCTTGAACGGGGTGGGTATTACAGCAATGTTGTGGGCCTCCGTG
GTTCCTTTCGTCGCGTACCTTGAGTGGGGTGGGTAATACACGGGGCGTGA
AAGTGTGTGTGGGGGGGGTCGCCGTGGTTTTCGTATTTCAGCTCTCCCGA
CGACACCTGAGAAGCCCCTTTAATTCATTGTTGGCGAAGGGTGCATAGAT
AGTAGGTGGCGCACTGCTCACCTTTGTGGTCTCGTCTACGAAAGCTCAAC
GTGTCACCATCCGCCACCCCTTCTGCAACGCGCAGTCGGTAACCTCGGAG
TCTTTGCATATCAACGTCGGACGGACACCGGCTGCAGCAGGCGATTCCCG
CATTCTAACTTGCAGCTTTCGTCATCATGTATTGTGTTCGTTAGGCGTCG
GTTTGGGTGGGCAAGCCCCGCGGCCGGCTTGAGCTTTGACAATGTCATCA
TGTTTTTATGTTTTCTGCCGGACTTGTTCATACGTTCGTTAGGTCGGCGA
TCGCGAGGTTTGACACCATAATGTTTTTCTACTTCCGTGCATGCACACGC
GTTCGTTAGGTGGGCAAGACGCGGCCGGTGCCCCAATCGCCGTCGCCTGC
CGCTCCGCCCACCTCTGCTCCCCCGCCATCACCCTTCGATTCGGGAGATG
ACGCCGCGATCGGCGTGGCCGGTGTCTCAGGCTCGAGCAGCGTTGGCGGG
CAAGGGCACCAGTGCTTTGATCAGAACTTCCTGTTCAGGGTGTCGTGCGC
TTGCCGCACCGGGGACTACCTCGTTTTAGAG GTAAAAAAAAAACAGCAGC
AACGGCGCACTGTGTCATTTCTTTTTGACCCACCGCTAAATTTTTCATGC
GTGTGCTCAGCAGCAGCAGCAGCAGAATGAACGGCACGTGTTCGTCGAAA
GTATGTTCCTTTTCTTGACCGACCGCTAGAGTAGGCATGCGTATTCACAG
CAACAGCAGCAGCAGCAGCAGCAACGGCAGCAACAGCACGCTTCGTCAAA
AAGTATATTCAACTTTAGGCCGACCGCCACATCGTGGGTGCGTATGCACA
GCAGCAGCAGCAGCAGCAGAAGCAGAAGCAGAAGCTGCACGCTTCGTCGT
CGAGATGGCTTACCCCCTCCCCTCCCATACCCTCCCCTTCCCCTCGGCAG
GTGTACGACCGGGCGGGCGGGCTGTCAGCCGGGGCAGACCCCCTTCTCGG
GCACTGTCGGATACCGCTCTACCGGGTTCCACGCAAGAGGTGGGGATGA back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig979:787..7835-
>mRNA_Ecto-sp13_S_contig979.21441.1 ID=mRNA_Ecto-sp13_S_contig979.21441.1|Name=mRNA_Ecto-sp13_S_contig979.21441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig979:787..7835- (Ectocarpus species13 EcNAP12_S_4_19m) ATGCAAGCACTCAAGTGGGCGGCAGGCATCGCTCTTGGTATAGATCCAGA GGATTCCCCTGGCTTTCGAGGTGGAAATCGAGGCCGTACCGAGAGCTATT CCCACATATACGACGATGATGGCCCAAGCTTTATCTCCAACACTGCTGGG CGACCGCGCGCCGGGACCACCACCGGCGATAGCCAAACGGTCTCCGCTGC TCGCGGTGTCGCAAGGGGAGGAGTAGGACGAGGGAATGGCCGCCGTGGTA GTCGCAGCGGGTGGATGGACGACGACTCTTCTCCTTCGTGTCTGCTTTGC GATGCTCTCTTCACCTTCACCAACAGGCGGCACCACTGCCGCGCCTGCCT GAAGCTAGTGTGCTCGGCGTGCAGCTCCAACATGTGGAAGCTGGAGGCCG GGCGGAGCCGGGGCTACGGCAGCGCCGGGAGGCGCGCGGCCTTCAAGCGC GTCTGCGACAAGTGCTACGGCACCCTCGTGGCTACCAAAGAGGTGCTGAT TGGAGGAGACGCGACTTCCCTCGACTCCGGCGAGCACGTTCACTTCGAGG TGATCGTGCACGAGACCTTGGGCAGAGCCCAAGCCTCCCGCGGCGATGCC CCTCCCTCGGTGCCGGTGGGGCCGTCGTCTCCCCGACCGGGGGCGGCGAC GACGGGTTTCGGTGTCGGTTTCAGCGGAAAAGCGACGTGGGGGGAAGGGG GTGATGCTGCTGCTGGCGGCGGCGGTGGAGCCGCTCCCACCCCCAGCGCG GAGGCAGCTCCAAGGCTGCTCGGGTCAGACGTGCTAAACCGTGCAAGAGC GCCGTACTGCAGGCTGACGGTGGCGAGCAAGCAGGTGGGCAAGACGCGGC CGGTGCCCCAATCGCCGTCGCCTGCCGCTCCGCCCACCTCTGCTCCCCCG CCATCACCCTTCGATTCGGGAGATGACGCCGCGATCGGCGTGGCCGGTGT CTCAGGCTCGAGCAGCGTTGGCGGGCAAGGGCACCAGTGCTTTGATCAGA ACTTCCTGTTCAGGGTGTCGTGCGCTTGCCGCACCGGGGACTACCTCGTT TTAGAGGTGTACGACCGGGCGGGCGGGCTGTCAGCCGGGGCAGACCCCCT TCTCGGGCACTGTCGGATACCGCTCTACCGGGTTCCACGCAAGAGGTGGG GATGA back to top