mRNA_Ecto-sp13_S_contig97856.21436.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: D8LPJ9_ECTSI (Ribonucleoside-diphosphate reductase n=2 Tax=root TaxID=1 RepID=D8LPJ9_ECTSI) HSP 1 Score: 283 bits (725), Expect = 3.660e-89 Identity = 133/140 (95.00%), Postives = 139/140 (99.29%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIGKTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKGSFAMYLEMWHADI EFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADG+WTLLSPSDAPDLIDLHGADFD+AY+KYES+GIGKTIKARTLFAKVVESQIETGGPYYLFKD+CNAKSNQQHLGTIRSSNLCAEV+ Sbjct: 286 RKGSFAMYLEMWHADILEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGDWTLLSPSDAPDLIDLHGADFDRAYEKYESDGIGKTIKARTLFAKVVESQIETGGPYYLFKDSCNAKSNQQHLGTIRSSNLCAEVI 425
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: A0A2T4WP70_9BACT (Ribonucleoside-diphosphate reductase subunit alpha (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4WP70_9BACT) HSP 1 Score: 209 bits (531), Expect = 5.790e-62 Identity = 96/141 (68.09%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIG-KTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKGSFAMY+E WHADIF+FLDLKKN+G E MRARDLFY +W+ DLFM RVKAD WTL+ P++ P L D+H +F+ Y KYES G G KTIKAR L+ K++ESQIETG PY L+KDA N+KSNQQ+LGTIRSSNLC E++ Sbjct: 64 RKGSFAMYVEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMERVKADSTWTLMCPNECPGLFDVHSEEFNTLYHKYESEGKGRKTIKARELWGKILESQIETGTPYMLYKDAANSKSNQQNLGTIRSSNLCTEII 204
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: A0A6T9KEA0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9KEA0_9EUKA) HSP 1 Score: 196 bits (497), Expect = 1.840e-60 Identity = 90/141 (63.83%), Postives = 111/141 (78.72%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIGK-TIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKG+FA+YLE WHAD+F FL+LKKN+G E RARDLFY LWV DLFM RV+A G W+L P +AP L D++G FD+ Y++YE G K T++A+ L+ K+VESQ+ETG PY L+KDACN+KSNQQHLG IR SNLC EVV Sbjct: 54 RKGAFAIYLEPWHADVFAFLELKKNHGKEESRARDLFYALWVPDLFMRRVEAGGEWSLFCPDEAPGLADVYGKAFDELYERYEREGRAKRTVQAQQLWFKIVESQMETGTPYMLYKDACNSKSNQQHLGAIRGSNLCTEVV 194
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: A0A2D7SPF7_9FLAO (Ribonucleoside-diphosphate reductase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D7SPF7_9FLAO) HSP 1 Score: 207 bits (528), Expect = 2.480e-60 Identity = 95/141 (67.38%), Postives = 117/141 (82.98%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIG-KTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKGSFA+Y+E WHADIFEFLDL+KN+G E MRARDLFY LW DLFM RV+ DGNWTL+ P++ P L +++G +F+ Y+KYES G G KTIKAR L+ K++ESQIETG PY LFKD+CN KSNQ++LGTIRSSNLC E++ Sbjct: 292 RKGSFAIYIEPWHADIFEFLDLRKNHGKEEMRARDLFYALWTPDLFMERVEKDGNWTLMCPNECPGLANIYGDEFNDKYEKYESEGKGRKTIKARELWDKIIESQIETGTPYMLFKDSCNIKSNQKNLGTIRSSNLCTEIL 432
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: A0A506PQP7_9FLAO (Ribonucleoside-diphosphate reductase n=1 Tax=Paucihalobacter ruber TaxID=2567861 RepID=A0A506PQP7_9FLAO) HSP 1 Score: 207 bits (528), Expect = 3.360e-60 Identity = 95/141 (67.38%), Postives = 116/141 (82.27%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIG-KTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKGSFA+Y+E WHADIF+FLDLKKN+G E MRARDLFY +W+SDLFM RV+ DG+WTL+ P++ P L D+H F+ Y KYE+ G G KTIKAR L+ K++ESQIETG PY L+KDACN KSNQQ+LGTIRSSNLC E++ Sbjct: 292 RKGSFAIYIETWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVQEDGHWTLMCPNECPGLADVHSEAFETLYTKYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDACNRKSNQQNLGTIRSSNLCTEIL 432
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: A0A401XMX1_9FLAO (Ribonucleoside-diphosphate reductase n=1 Tax=Thermaurantimonas aggregans TaxID=2173829 RepID=A0A401XMX1_9FLAO) HSP 1 Score: 207 bits (528), Expect = 4.260e-60 Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIGK-TIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKGSFA+YLE WHADIF+FLDLKKN+G E +RARDLFY LW+ DLFM RV+ADGNWTL+ P++ P L D +G F++ Y++YE G G+ TIKAR L+ K++ESQIETG PY L+KDACN KSNQ++LGTIRSSNLC E++ Sbjct: 292 RKGSFAIYLEPWHADIFDFLDLKKNHGKEELRARDLFYALWIPDLFMKRVEADGNWTLMCPNECPGLYDTYGKKFEELYEQYEREGRGRRTIKARELWQKIIESQIETGTPYMLYKDACNEKSNQKNLGTIRSSNLCTEII 432
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: A0A812YHU2_9DINO (Ribonucleoside-diphosphate reductase n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812YHU2_9DINO) HSP 1 Score: 209 bits (532), Expect = 4.970e-60 Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIG-KTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKGSFA+YLE WHADIF+FLDLKKN+G E MRARDLFY LW DLFM RVK DG WTL+ P++ P L D+H +F++ Y+KYE+ G G KTIKAR L++K++ESQIETG PY L+KDA NAKSNQQ+LGTIRSSNLC E++ Sbjct: 740 RKGSFAIYLEPWHADIFDFLDLKKNHGKEEMRARDLFYALWTPDLFMKRVKEDGMWTLMDPNECPGLCDVHSEEFNKLYEKYEAEGKGRKTIKARDLWSKIMESQIETGTPYMLYKDAANAKSNQQNLGTIRSSNLCTEII 880
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: M3HM96_CANMX (Ribonucleoside-diphosphate reductase n=1 Tax=Candida maltosa (strain Xu316) TaxID=1245528 RepID=M3HM96_CANMX) HSP 1 Score: 207 bits (526), Expect = 6.040e-60 Identity = 89/140 (63.57%), Postives = 116/140 (82.86%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIGKTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 R G+FA+Y+E WHADIFE LD++KN+G+E +R RDLFYGLWV DLFM RVK +GNWTL SP++AP L D++G DF++ Y+KYE G+G+ +KA L+ ++ESQ ETGGPY L+KDACN KSNQ++LGTI+SSNLC E+V Sbjct: 291 RPGAFAIYVEPWHADIFEILDMRKNHGSEELRTRDLFYGLWVPDLFMKRVKENGNWTLFSPNEAPGLSDVYGEDFEELYQKYEQQGLGREVKAHKLWLSILESQTETGGPYMLYKDACNTKSNQKNLGTIKSSNLCCEIV 430
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: A0A2D5HQE0_9FLAO (Ribonucleoside-diphosphate reductase n=4 Tax=unclassified Flavobacteriaceae TaxID=61432 RepID=A0A2D5HQE0_9FLAO) HSP 1 Score: 206 bits (523), Expect = 1.550e-59 Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIG-KTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKGSFA+Y+E WHADIF+FL+LKKN+G E MRARDLFY +W DLFM RV+ D NWTL+ P++ PDL +LHG +FD+ Y+KYES G G KTIKAR L+ K++ESQIETG PY L+KD+ N KSNQ++LGTIRSSNLC E++ Sbjct: 292 RKGSFAIYVEPWHADIFDFLELKKNHGKEEMRARDLFYAMWTPDLFMKRVEEDSNWTLMCPNECPDLYNLHGDEFDELYQKYESEGRGRKTIKARELWEKILESQIETGTPYMLYKDSANRKSNQKNLGTIRSSNLCTEIL 432
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Match: A0A2E8DJR3_9FLAO (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E8DJR3_9FLAO) HSP 1 Score: 202 bits (514), Expect = 1.680e-59 Identity = 93/141 (65.96%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 1 RKGSFAMYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWTLLSPSDAPDLIDLHGADFDQAYKKYESNGIG-KTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQQHLGTIRSSNLCAEVV 420 RKGSFAMYLE WHADIF+FLDLKKN+G E MRARDLFY +W+SDLFM RV+ DG WTL+ P++ P + ++H +F+ Y KYE+ G G KTIKAR L+ K++ESQIETG PY L+KDA N KSNQ++LGTIRSSNLC E++ Sbjct: 292 RKGSFAMYLETWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVQEDGKWTLMCPNECPGMDEVHSDEFEALYLKYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNLGTIRSSNLCTEIM 432 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig97856.21436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig97856.21436.1 >prot_Ecto-sp13_S_contig97856.21436.1 ID=prot_Ecto-sp13_S_contig97856.21436.1|Name=mRNA_Ecto-sp13_S_contig97856.21436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp MYLEMWHADIFEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGNWback to top mRNA from alignment at Ecto-sp13_S_contig97856:2..421- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig97856.21436.1 ID=mRNA_Ecto-sp13_S_contig97856.21436.1|Name=mRNA_Ecto-sp13_S_contig97856.21436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=420bp|location=Sequence derived from alignment at Ecto-sp13_S_contig97856:2..421- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig97856:2..421- >mRNA_Ecto-sp13_S_contig97856.21436.1 ID=mRNA_Ecto-sp13_S_contig97856.21436.1|Name=mRNA_Ecto-sp13_S_contig97856.21436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=402bp|location=Sequence derived from alignment at Ecto-sp13_S_contig97856:2..421- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |