mRNA_Ecto-sp13_S_contig9783.21433.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9783.21433.1
Unique NamemRNA_Ecto-sp13_S_contig9783.21433.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: D7G7Z6_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z6_ECTSI)

HSP 1 Score: 896 bits (2316), Expect = 0.000e+0
Identity = 501/576 (86.98%), Postives = 520/576 (90.28%), Query Frame = 2 
Query:    2 LEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPASGKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDQQAALTKSMPCKGRGFADKPCAFLLPMGDSSEEGDTLAAPARAAXXXXXGEWGSLAKALTLAALLAYAWALFFDRRAVFGKKGGPSAAGSGRTPAEEKSGTPHTRVALPAKREKLAVISPEKAAGVPAVATSGAAPHAHADCDKAGPGGRDAKDVRGPSGDVHHDDVPIAEDGSGEVVPGRGELAGARAEKEDPSPAPAREAPREECGALAERAEGPPASW-DSRQEPDTSFLDGEIASGGVAGKVEGDISGGGGEEVANGGPKAVASTVGGDAGDCGAXXXXXXXXXXXXXXXXXXXXXXXPVGRSDTIVSGDNAGSEEVVIAEVRSVTDADRASIAVAPAVFNVDNGEMPRGNISSEEVWSTPLPIEEISNGEGS-CEILVKE 1723
            LEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDG DLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPA GKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWD+QAALTKSMPCKGRGFADKPCAFLLP GDSSEEGDTLA      XXXXX EWGSL KALT+AALLAYAWALFFDRRAVFGKKG PSAAG GR PAEEKSGT H+RVALPAK EKLAVIS E++AGVPAV  SGA PHAHAD +KAGP GRD KD+RGPSGDV HDDV +AE G GEVVPGRGELAGA AEKEDPSP PAREAPREECGALAERAE PPAS  DSR+EPDTSFLDGEIA+GG+AG+VEG IS GGG EV N GP AVAS +GG+AG    XXXXXXXXXXXXXXXXXXXXXXX      TIVSGDNA S +VVIAEVRS TDADRA+I+VAPAVFNV NGE+PRGNISS EVWSTPLP+E ISNGEGS CEILVKE
Sbjct:   44 LEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGIDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPAGGKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDRQAALTKSMPCKGRGFADKPCAFLLPTGDSSEEGDTLAXXXXXXXXXXXXEWGSLVKALTMAALLAYAWALFFDRRAVFGKKGEPSAAGPGRMPAEEKSGTLHSRVALPAKHEKLAVISREQSAGVPAVVISGAVPHAHADGEKAGPDGRDVKDLRGPSGDVQHDDVLMAEGGGGEVVPGRGELAGATAEKEDPSPTPAREAPREECGALAERAEVPPASSSDSREEPDTSFLDGEIANGGIAGQVEGSISRGGGVEVTNSGPTAVASAIGGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVSGDNAPSGDVVIAEVRSATDADRAAISVAPAVFNVGNGELPRGNISSGEVWSTPLPVEGISNGEGSSCEILVKE 619
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: A0A6H5KXT6_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT6_9PHAE)

HSP 1 Score: 883 bits (2282), Expect = 1.790e-314
Identity = 489/574 (85.19%), Postives = 506/574 (88.15%), Query Frame = 2 
Query:    2 LEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPASGKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDQQAALTKSMPCKGRGFADKPCAFLLPMGDSSEEGDTLAAPARAAXXXXXGEWGSLAKALTLAALLAYAWALFFDRRAVFGKKGGPSAAGSGRTPAEEKSGTPHTRVALPAKREKLAVISPEKAAGVPAVATSGAAPHAHADCDKAGPGGRDAKDVRGPSGDVHHDDVPIAEDGSGEVVPGRGELAGARAEKEDPSPAPAREAPREECGALAERAEGPPASWDSRQEPDTSFLDGEIASGGVAGKVEGDISGGGGEEVANGGPKAVASTVGGDAGDCGAXXXXXXXXXXXXXXXXXXXXXXXPVGRSDTIVSGDNAGSEEVVIAEVRSVTDADRASIAVAPAVFNVDNGEMPRGNISSEEVWSTPLPIEEISNGEGSCEILVKE 1723
            LEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDG DLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAP   KYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDQQAALTKSMPCKGRGFADKPC FLLP GDSSEEGDTLAAPARAA     GEWGSL KALTLAALLAYAWALFFDR AVFGKKG PSAAGSGR PAEEKS TPHTRVALPAKREKLAVI  E++ GVPAV TSGA PHAHAD +KAGP GRDAKD+RGPSGDVH +DVP+AE G GEVVPGRGEL GA AEKEDPSPAPARE PREECG L ERAE PPAS  SR+EPDTSFLDGE         VEG IS GG  EV N GP AVASTVGG+AGD   XXXXXXXXXXXXXXXXXXXXXXX      TIVSGD+AGS ++V A VRSV+DADRA+IAVAPAVFNV N E+PRG+ISS EVWSTPLP+E  S+GE SCEILVKE
Sbjct:   75 LEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGIDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPVGEKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDQQAALTKSMPCKGRGFADKPCDFLLPTGDSSEEGDTLAAPARAAAGSGGGEWGSLVKALTLAALLAYAWALFFDRPAVFGKKGEPSAAGSGRMPAEEKSVTPHTRVALPAKREKLAVILREESVGVPAVVTSGAVPHAHADGEKAGPDGRDAKDLRGPSGDVHREDVPMAEGGDGEVVPGRGELGGATAEKEDPSPAPARETPREECGGLVERAEVPPASSGSREEPDTSFLDGE---------VEGAISSGGSVEVTNSGPTAVASTVGGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVSGDSAGSGQLVTAGVRSVSDADRAAIAVAPAVFNVGNAELPRGSISSGEVWSTPLPVEGTSSGEDSCEILVKE 639
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: A0A835YMA7_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 3.690e-58
Identity = 110/228 (48.25%), Postives = 146/228 (64.04%), Query Frame = 2 
Query:   23 GWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPASGK---YVRGEILHGVFHIKAAKNKKH-SEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDQQAALT-------------KSMPCKGRGFADKPCAFLLPM 655
            GW+PV D G  QVWK +MP+S F+ +K+ A++  SP AL EVL PG+++IV+ YNP++ +G D+E + RD+K+SWS+TM +WPCR RDFVT I R  L DG  AI+  AT+HP+ PA G     VR EILHG+F ++    + H S+FTMV H +PGG IP WL N LA   P +FV  L  VA+++D  AA T             +S PC  RGF   PC +LL M
Sbjct:   57 GWEPVLD-GETQVWKMTMPDSAFIFVKAMATIDASPVALREVLAPGELDIVKMYNPVITEGRDIEYLGRDSKISWSSTMPMWPCRGRDFVTFINRIRLPDGGTAIIQKATTHPQYPAPGPGYDTVRAEILHGLFLVQPVPGESHRSQFTMVQHLNPGGKIPAWLTNQLAARTPASFVTALGRVAQRFDAVAAATANDATTTKGSKGSRSGPCFDRGFDSPPCPWLLNM 283
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH)

HSP 1 Score: 99.0 bits (245), Expect = 3.530e-19
Identity = 56/202 (27.72%), Postives = 96/202 (47.52%), Query Frame = 2 
Query:   17 DGGWKPVRDDGHVQVWKRSMPNS------------DFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPASGKYVRGEILHGVFHIKAAK------NKKHSEFTMVHHFSPGG----NIPPWLMNWLAEGKPITFVRKLEE 556
            +  W  + D   ++VW+  +P S             F  + S   L   P+ ++      D   V +YN   +   DLE +D + K++WSA+  + P + RDFVT +   T  DGS+ I N A  HPKAP + +++R EI+ G   ++ A+      +   +  T++ H +PGG     +   ++N  A   PI F++ L +
Sbjct:   23 EASWTQISDSDGIKVWRTMLPESLQIAGRPLGPSAKFFCVMSSGILDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGLRQ 222
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: A0A7S0I3S0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I3S0_9CRYP)

HSP 1 Score: 97.8 bits (242), Expect = 2.550e-17
Identity = 57/203 (28.08%), Postives = 98/203 (48.28%), Query Frame = 2 
Query:   14 SDGGWKPVRDDGHVQVWKRSMPNSDFVA------------IKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPASGKYVRGEILHGVFHIKAAKNKKHS------EFTMVHHFSPGG----NIPPWLMNWLAEGKPITFVRKLEE 556
            S+  W  + D   ++VW+  +P+S  VA            + S   L   P+ ++      D   V +YN   +   DLE +D + K++WSA+  + P + RDFVT +   T  DGS+ I N A +HP AP + +++R EI+ G   ++  + +  S        T++ H +PGG     +   ++N  A   PI F++ L +
Sbjct:  381 SEASWTQISDSDGIKVWRTMLPDSLLVAGRPLGPSAKFYCVMSSGVLDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTAPDGSLIIANRAETHPTAPETDRFLRMEIMIGGNVLRPVREEDGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGLRQ 581
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: A0A7S4K5H3_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K5H3_GUITH)

HSP 1 Score: 86.7 bits (213), Expect = 7.340e-16
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 2 
Query:   17 DGGWKPVRDDGHVQVWKRSMPNS------------DFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPASGKYVRGEILHG 409
            +  W  + D   ++VW+  +P S             F  + S   L   P+ ++      D   V +YN   +   DLE +D + K++WSA+  + P + RDFVT +   T  DGS+ I N A  HPKAP + +++R EI+ G
Sbjct:   23 EASWTQISDSDGIKVWRTMLPESLQIAGRPLGPSAKFFCVMSSGILDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIG 163
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: B8CFB1_THAPS (START domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFB1_THAPS)

HSP 1 Score: 87.4 bits (215), Expect = 6.420e-14
Identity = 69/271 (25.46%), Postives = 113/271 (41.70%), Query Frame = 2 
Query:    5 EDTSDGGWKPV----------RDDGHVQVWKRSMPNS------------DFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPAS-----GKYVRGEILHGVFHIKAAKNKKH-SEFTMVHHFSPGGNIPPWLMNWLAEG----KPITFVRKLEEVAKKWDQQAALT------KSMP---CKGRGFADKPCAFLLPMGDSSEEGDTLAAP 694
            E+ +  GWK +            DG  +V+ + +P+S            ++  IK  +++      +   L   + + V QYN LVED +D+EVI   +K++W+    +   +PRDFVT        DG+  IVN A  H   P +     G   RG  L G   I    +  H +  T++ H +PGG +P W +N         +P      + E A  + + A+ +       S+P    K  G A    A+  P G   +E  + + P
Sbjct:  489 EERAGDGWKTISCNSFVKKKFNKDGRTEVYLKWLPDSREEYVDKDNAEQEYPCIKCYSTIDAPMDQVCAFLA--NEKTVPQYNELVEDHADVEVITPHSKITWTLMPKVLFVKPRDFVTFCSHRWKRDGTQVIVNQACDHEDVPGNMVEGEGDVTRGFALRGANFISKDPDDPHKTRITILAHANPGGGLPQWALNTAVNAAVQIEPFKLFYSINEGASNYKESASFSPQTTTMNSLPGRSTKPAGMAQMGYAYFWPQGGGPKEATSQSDP 757
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: A0A3P6T7K2_LITSI (START domain-containing protein n=1 Tax=Litomosoides sigmodontis TaxID=42156 RepID=A0A3P6T7K2_LITSI)

HSP 1 Score: 75.9 bits (185), Expect = 3.280e-11
Identity = 56/194 (28.87%), Postives = 95/194 (48.97%), Query Frame = 2 
Query:   23 GWKPVRDDGHV-QVWKRSMPNSDFVAIKSKASLAVSPQAL-FEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVA-IVNSATSHPKAPASGKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGN-------IPPWLMNWLAEGKPITFVRKLEEVAKKWD 574
            GWK       V  VW +S+PNS+   IK+KA L   P +  ++VL   D +   +++       D+ +I+ +N + + A  GI P +PRDFV  +QR+ L++G    I   +  H K P    Y+RG +    ++I+   ++   + T ++H  PGG        +P WL N LA+      ++ L     K++
Sbjct:   42 GWKVAYSKKDVVNVWTKSVPNSNLQMIKAKAVLTGVPASTAYDVLH--DPQYRSKWDKYHVATVDVGLINPNNDICYYAVGGIPPLQPRDFV--LQRSWLDNGKEKYICGHSVCHKKCPPVKGYIRGIVYLTAYYIRNT-DENSCQITYINHSDPGGTDIRFSGKVPTWLTNHLAKVIGPKLIKNLHNACLKYE 230
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: A0A448ZKN5_9STRA (START domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKN5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.260e-7
Identity = 50/192 (26.04%), Postives = 82/192 (42.71%), Query Frame = 2 
Query:  176 RQYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPASGKYVRGE------------ILHGVFHIKAAKN--KKHSEFTMVHHFSPGGNIPPWLMNW----LAEGKPITFVRK-----------LEEVAKKWDQQAALTK--SMPCKGRGFADKPCAFLLPMG 658
            R+YN L+ D  D+EV+   +K+ WS +  +   +PRDFVT+ +   L+DG+  I N A  HP A  +     G+             L G  ++    +   K ++  M+ H + G ++P W +      LA  KP   + +           LE   +K +  + +T   S  C+  G A    A   P G
Sbjct:  170 REYNSLLIDQEDVEVLTPHSKICWSQSKKLLFIQPRDFVTYCRHRWLKDGTQLITNQACDHPNATLNITGSNGQNSIRNLSGYRAFSLRGATYVSRCPDFPSKRTKIVMLSHCNCGRDVPEWAVRAAVGVLAPIKPFEIIHRIDVGIRKARNELEMAEEKQNANSVMTTDTSRSCRPAGMAQMGYACFWPNG 361
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BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Match: A0A7S4AYL9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AYL9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.290e-6
Identity = 46/166 (27.71%), Postives = 76/166 (45.78%), Query Frame = 2 
Query:  179 QYNPLVEDGSDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPASGKY--------VRGEILHGVFHIKAAKN--KKHSEFTMVHHFSPGGNIPPW----LMNWLAEGKPITFVRKLE----------EVAKKWDQQAALTKSMP 604
            +YN L+ D  DLE++   +K+ WS T  +   +PRDFVT+ +   L DG+  I N A  H  + A G Y         R   L G  +I    +   + ++  M+ H + G ++P W     ++ LA  KP   + ++           E+A+K +   + T S P
Sbjct:  271 EYNSLLVDQEDLEILTPHSKICWSQTKKLLFIQPRDFVTYCRHRWLNDGTQLITNQACDH-HSTAIGDYNTKQNRSRYRAFNLRGATYISRCPDFPSERTKLIMLSHCNCGQDMPEWSIRTAVSVLAPIKPFEIIHRITIGILQAREELEIAEKKESTKSTTISTP 435
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9783.21433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G7Z6_ECTSI0.000e+086.98START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KXT6_9PHAE1.790e-31485.19START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YMA7_9STRA3.690e-5848.25START domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S4NFJ2_GUITH3.530e-1927.72Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0I3S0_9CRYP2.550e-1728.08Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S4K5H3_GUITH7.340e-1630.77Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
B8CFB1_THAPS6.420e-1425.46START domain-containing protein n=1 Tax=Thalassios... [more]
A0A3P6T7K2_LITSI3.280e-1128.87START domain-containing protein n=1 Tax=Litomosoid... [more]
A0A448ZKN5_9STRA1.260e-726.04START domain-containing protein n=1 Tax=Pseudo-nit... [more]
A0A7S4AYL9_9STRA1.290e-627.71Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9783contigEcto-sp13_S_contig9783:2..5824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score846.3
Seed ortholog evalue8.2e-243
Seed eggNOG ortholog2880.D7G7Z6
Model size2480
KEGG koko:K10779
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.lipid binding
EggNOG OGsKOG2761@1,KOG2761@2759
Ec32 ortholog descriptionSTART-like domain
Ec32 orthologEc-06_009570.1
EC3.6.4.12
Cds size1653
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9783.21433.1prot_Ecto-sp13_S_contig9783.21433.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9783 1593..5070 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464242.0754604-UTR-Ecto-sp13_S_contig9783:1..591681464242.0754604-UTR-Ecto-sp13_S_contig9783:1..59Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9783 2..59 +
1681464242.0899212-UTR-Ecto-sp13_S_contig9783:1577..15921681464242.0899212-UTR-Ecto-sp13_S_contig9783:1577..1592Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9783 1578..1592 +
1681464242.1462746-UTR-Ecto-sp13_S_contig9783:5070..58241681464242.1462746-UTR-Ecto-sp13_S_contig9783:5070..5824Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9783 5071..5824 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464242.1007533-CDS-Ecto-sp13_S_contig9783:1592..17001681464242.1007533-CDS-Ecto-sp13_S_contig9783:1592..1700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9783 1593..1700 +
1681464242.1118429-CDS-Ecto-sp13_S_contig9783:2051..22341681464242.1118429-CDS-Ecto-sp13_S_contig9783:2051..2234Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9783 2052..2234 +
1681464242.1228442-CDS-Ecto-sp13_S_contig9783:2547..28061681464242.1228442-CDS-Ecto-sp13_S_contig9783:2547..2806Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9783 2548..2806 +
1681464242.133602-CDS-Ecto-sp13_S_contig9783:3967..50701681464242.133602-CDS-Ecto-sp13_S_contig9783:3967..5070Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9783 3968..5070 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9783.21433.1

>prot_Ecto-sp13_S_contig9783.21433.1 ID=prot_Ecto-sp13_S_contig9783.21433.1|Name=mRNA_Ecto-sp13_S_contig9783.21433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=551bp
MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVI
DRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPA
SGKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEG
KPITFVRKLEEVAKKWDQQAALTKSMPCKGRGFADKPCAFLLPMGDSSEE
GDTLAAPARAAAGGGGGEWGSLAKALTLAALLAYAWALFFDRRAVFGKKG
GPSAAGSGRTPAEEKSGTPHTRVALPAKREKLAVISPEKAAGVPAVATSG
AAPHAHADCDKAGPGGRDAKDVRGPSGDVHHDDVPIAEDGSGEVVPGRGE
LAGARAEKEDPSPAPAREAPREECGALAERAEGPPASWDSRQEPDTSFLD
GEIASGGVAGKVEGDISGGGGEEVANGGPKAVASTVGGDAGDCGAAAVEG
ATSGAVADTGTGEVEPATPVGRSDTIVSGDNAGSEEVVIAEVRSVTDADR
ASIAVAPAVFNVDNGEMPRGNISSEEVWSTPLPIEEISNGEGSCEILVKE
*
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mRNA from alignment at Ecto-sp13_S_contig9783:2..5824+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9783.21433.1 ID=mRNA_Ecto-sp13_S_contig9783.21433.1|Name=mRNA_Ecto-sp13_S_contig9783.21433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5823bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9783:2..5824+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACTGGAGGACACTAGTGATGGGGGTTGGAAGCCGGTTAGGGATGACGGCC
ATGTTCAGGTGTGTCTGCTGTCAAACCTGGTACACACACGTGTTGCAAGG
GGGGAGCTTCCGAGACCCTCCTTGACCCTCGTGTGCCGGGCTGCTTGGTG
CTTGGCATTGAGATGTCTTCGCAAGTCTGAAATAGCGAGATGAACTACAA
ACAACGCCAGATCACACGAGACGCGCGCATGTGTATACCGCAACAGCAAC
AACCACATGTTTTCACCACAACCCAAGTGCCATGCATCCCACGTTGAGTT
ATCCATGTACCTTGTAATTCAACCACCCAAGATGTCGGAAACGGTGTTGA
CACCAATGCGTGCAGTATTTTGTTTCTTTCATCCATTGCACAGCATGTCC
ATACCTAAATGGTATGGTTTGGCAGGAGTTTGGCAAGTTTTGTTGTTGTG
TTGGACGCCATTCGCTTCGCACTCCCGGCACCCAAAACGACACAACAAGT
GAACCCCCCCAACATCGGTGGGCATCAGTTACACAGAGCCTTAACTCCGC
CACCAAGCGCCTCCGCAAGAGAAGCACCGACATTCCGAGCCACAGCATCC
TCGTCCTCAGCCTGCTGAAGAACTTCCCCTCTCCACGGCGCTCGTCACTC
GTCAATACCAAAGGGACTACCGCGATGACCGCTTGGGCCCTGGTGCTGTT
TGGTCATGATCTCATCGATCTCCTTCACACGAGGATCAGGCAGTTGGCTG
AAGCTGCTGAGGCCGTTGAGTTTCTGGTAGTTGACGGTGGTTCGTAGCCC
TCCAGGTTTCTTGGATGATCTGCCATACAGAAAAGGAAACTCCAAGTGCT
CCTCTGAGGTGATCAGAAGATCAAACTCGGACGGAACAGCAGTGTGTCTA
ACGGAGCCTCCTTTGCTGCTCATATCGAGCGGTTGTTGACTTCAGCGCCC
GTTTTACAGTTCCCTGACTTTGGAATGCCTTTTTGCTGTGAAGAGAACAA
CAACAACAACAACAACAATAAGACTGTGGTGGGAAATCCCACGGACAACG
AACGCTCCCCGGCGCTGGCCTTGCGGACCCTGCGTCAACGGAATTTCTTG
GAGACACGGTCTGAGCGTTTATTCGTTATTGAAAAACGGCATAGAACGTG
CCTGTAAGGCGTCCTATTACGCGACGTCCGCGAGGTCAGCGCCGGGAAGC
ATCCGCTTCCCGTGGATCGAATCGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCAATCTTTAAGCGGGATGAAAATG
TTGCTGCTTGACCACGCGGTGTGCAGGTGTGGAAGAGATCTATGCCCAAC
AGCGATTTTGTTGCGATCAAGTCGAAGGCGTCCTTGGCGGTTTCGCCGCA
GGCCTTGTTTGAGGTCCTCACGCCCGGGGACATCGAGATCGTCAGACAGG
TGGGACGTGATTACGCTACCGGCACTCGCGACATGTCTCTCAACCCCAGT
CTGCGCTCCTGTGCCACAGGAACGCTTTACGTTGTCAGTGCCAAAGTCAA
AGGCGTGCTGGCATGCGTCTCTTTAGAGACTTATTCGCGAGGTACGTGAA
TGAAGCACTGAGCTCGTGGGCTACCGTCTGTGCTTAACTGTGGTACGGTA
GACCTTCCTACTGCTGTGGACAGATTCAAATACAACACGCTTGATTGTTT
TGCGAAAGACGCTTTCTCATTGCTTTGAATGCTCTCGGCGCCCACTTTTT
CTGCTGTCAGCGTTAACCTCGGTTCCTGCCACCCCTTGCCGCATCTACAG
TACAACCCTCTGGTCGAGGATGGCAGTGATCTTGAGGTGATAGACCGGGA
CAACAAGGTGTCCTGGAGCGCGACGATGGGAATATGGCCCTGCCGCCCCA
GAGACTTTGTGACGCACATCCAGAGGGCCACCCTCGAGGACGGTAGCGTG
GCGATAGTTAACTCTGCTACCTCACACCCTAAGGTAGGGCGCGGTGACCA
TTTTATCGTAACGCGGCTTTGAGCACCAGTGTTACCGTTCTTCTTTGTTT
GCCCACGTTCGTTTCTCTGTGGCTCACCCGGATTGTCTTCAATACCTTCA
CACGCATATCGTCATGTTCGATACGTGCACACGCATGCGTCCTTTTCAAT
GAAAGATCATCTCGTGTGGGTCATGCTTACGAAGAGCGGCGTCGTGTGTA
TCAATCTGTCCAAGCCTGGCAGCTGGCTCATTGTAGTTCTCTACCGTTGC
TATGTGTGCTTTATTTGCACACGCCGCCGCTCTCTGGTTGCAAAAGGCCC
CAGCAAGCGGGAAGTACGTCCGCGGGGAGATTTTGCACGGCGTGTTCCAC
ATCAAGGCGGCGAAGAACAAGAAGCACTCCGAATTCACCATGGTGCACCA
CTTCAGCCCGGGCGGAAACATACCGCCCTGGCTGATGAACTGGCTGGCCG
AAGGAAAACCGATTACCTTCGTAAGAAAGCTCGAGGAAGTGGCGAAGAAG
TGGGATCAGCAGGCTGCGCTCACCAAGAGCATGCCCTGCAAGGGAAGGGG
ATTTGGTGAGACTCGTGGGGGGGGGGTTGGCGTTTTTTGTTGCGGAGCAA
CCAAATATATGGGACGCGCCAAGTCTGTGATGCGCCGTCGACGGCGTGGT
CGATTTATGTGGCAGTAGAGACCCCGTGAATGCACACGGTTGAAGTTGTA
CCCAAGCAACGCGCGCAGTTTCATGTTTTGTTGTGCTGCGTGTTGCACCA
GCGACGTCTTTTTTCTCACCCTCGTGGCCACTCGCCGCACGTTGGGGTGT
CTGACACGTCTGCACTACTGTGCTTTCCTACAGCACCTCATCGTCGAGCC
CGCCCACTACACACAAGTGGCCAATGGTCTACCAACCAAGGCAAACAGTA
GAAAGCCTCGGACTGCGCGGACCAGACTATGATTCCCCCCACATGACTGA
GAGCATGGTAGATTCCCCGTCACGACGGGGCTTAGCGAGGATGGGCGGCT
TCTGACTGTCTTTGTGCGTTGTCAAAACGCTGCTCTACACATCAGCTACA
GGTGGATCGACCTTTGGACGTTGGGGGTGTTTCTTCTCGCCGCGGACTTT
CCAGACACCCTGAAAATTTGATGGGTTGCATTTTCCTTGCCGGTACGATT
GCATAATCTACCGCGCGGTGAGGCAGCTGTGATAGTCTCCGATGCCGCGA
TGGGAGTTTCCTGTTTCATGGCTCAGGCGTGTTTGTGGAGGCGCAGCTTT
TTTCGTCGCGACCTTTGCCGGCGTTACCACTCGCGTGTTTTGCGTGGTCT
TGAACCCTCGCGCGAGGAATTCAAGCGACTTGTGTAAAGCACAACATCCC
GTACCGGCAGCCGTAGCAACTCGTACCTTTCGATGGGCAGCTGGGTCGCT
TCCGTGTGTGCCCTTGTTCTGGGTCTCGCAGCGTTTCCTTTTTGTCGCGA
GCTTGGCCTGCTCGACTTCATGGGGTCGGGAACGTGTCATCTTGCTTCCC
TCCTCCGCTTTTATTTTCGCCCTCCGCCAGCAGCTCTACCGGAAGGCTTC
TGACGAGGACCACCTAGGGCACACAACAAACAAACGACGACTGCAGCGCC
GTCGCCGGTATATCTCGACGGACGCTCTTGCCTCTCCGCCTTGAACACAC
CCCTCCCGTTCGAACCCCGCCCCGCGCGTCTGTTCCCTTCGTCCTTGGCT
GTGCCGCTCGTTTCAGCGGACAAGCCGTGCGCCTTTCTGTTGCCAATGGG
CGACAGCAGCGAGGAAGGCGACACGCTGGCGGCGCCGGCAAGAGCGGCGG
CAGGAGGCGGCGGCGGGGAGTGGGGGTCGTTGGCGAAAGCGTTAACCCTG
GCGGCGTTGTTGGCGTACGCTTGGGCTCTCTTCTTCGATCGCCGGGCAGT
GTTCGGGAAGAAGGGAGGGCCCTCGGCTGCGGGATCAGGCAGGACGCCCG
CGGAGGAGAAGAGTGGAACTCCTCACACCAGGGTGGCGTTGCCTGCCAAG
CGCGAGAAACTCGCGGTGATTTCACCGGAGAAGGCTGCCGGGGTCCCCGC
AGTGGCGACCTCGGGAGCGGCACCCCATGCCCATGCCGACTGTGACAAGG
CGGGCCCGGGTGGGAGAGACGCCAAGGATGTGAGAGGGCCTAGCGGAGAC
GTACACCACGACGACGTGCCCATCGCGGAGGATGGTAGCGGCGAGGTCGT
GCCTGGCCGAGGAGAGTTGGCAGGCGCGAGGGCGGAAAAGGAAGACCCCT
CGCCAGCACCAGCACGCGAGGCGCCCAGGGAAGAATGCGGGGCGCTTGCA
GAACGGGCGGAAGGTCCGCCCGCGTCGTGGGATTCTCGCCAAGAGCCCGA
CACCAGCTTTCTCGACGGAGAGATTGCCAGCGGCGGGGTTGCTGGTAAGG
TGGAGGGAGATATTTCAGGCGGAGGGGGTGAGGAGGTGGCGAATGGCGGG
CCAAAGGCAGTGGCAAGTACGGTCGGCGGGGATGCGGGAGATTGCGGCGC
AGCAGCGGTCGAAGGCGCGACTAGCGGAGCAGTCGCCGACACGGGGACGG
GCGAGGTAGAGCCGGCGACCCCAGTAGGGAGAAGCGACACGATCGTTAGC
GGGGACAACGCCGGAAGTGAAGAAGTGGTGATCGCTGAAGTGCGTTCAGT
AACGGACGCAGACAGAGCTTCGATTGCTGTAGCACCAGCGGTGTTTAACG
TGGACAACGGAGAGATGCCACGTGGCAACATCTCTAGCGAAGAGGTGTGG
TCAACGCCGCTGCCCATTGAAGAGATTTCGAATGGTGAAGGCAGCTGTGA
AATATTGGTAAAAGAGTGAGAATGGACTACACGGGACATGGGAAAGCAGC
CCTCCCCTTCGACAGAACTGCTATTAGTGCCCGTGGAGACGGTGAAATTT
GTACACTTGTTGAGAGTAACAAGCGGGCTGAAGCTGCGATAGCCGTACGC
TTGTGGCTGGGTGGCTCAAGTATCTCCGAGTGTGGACAGTGATGTGTGTC
ATGCAAGAATAGATAGATACATCTAGATGGTAGATTGCGGTACGACGCAA
ACACAGTGCTTAAGTGGAGAATTTGGTCCCGGAGGGAAATGCCAAGCGTG
TTGTTCGTACTTAATAGAAGCACAGCAGAAATGTTCTCTCGAGACGTATT
CCGGCCAGGTGGTGGTTGAAACGATAGCAGCCGTGTGTGGCTCTTAGTAG
AGTTTCGTTTGCATTGCCACCGACAGATGAAAGGGTCATCAATTAATGAG
CGAGTCGATCTTTTGCTTTATCTCATGTTTTCCTGCTGGTCGACATCGGC
GCAGCTGAATGTTGATTGGTCGATGGTACTTGGTCGGTGGGTGACGCCGG
CCGGGGCCGAGACTCCACCATGCTGAGAGAGATCGGTCCACACCGGGGCG
CTCTAGATGTTCTCTCTCTCTCGTGACGGCTCTCAACATGAACCTTGTCT
TTTTGTGCCCTTGTGTCTAAACGAAGCGCTGGTGAGCAACGTACGTGAGT
CGGCGTGTGTTCTCGTGAAGAGGTTATTAGTGGAAAAGTATATACTGTTG
TTGTGGGGAAGATGTTTGGAGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9783:2..5824+

>mRNA_Ecto-sp13_S_contig9783.21433.1 ID=mRNA_Ecto-sp13_S_contig9783.21433.1|Name=mRNA_Ecto-sp13_S_contig9783.21433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1653bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9783:2..5824+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCAACAGCGATTTTGTTGCGATCAAGTCGAAGGCGTCCTTGGCGGT
TTCGCCGCAGGCCTTGTTTGAGGTCCTCACGCCCGGGGACATCGAGATCG
TCAGACAGTACAACCCTCTGGTCGAGGATGGCAGTGATCTTGAGGTGATA
GACCGGGACAACAAGGTGTCCTGGAGCGCGACGATGGGAATATGGCCCTG
CCGCCCCAGAGACTTTGTGACGCACATCCAGAGGGCCACCCTCGAGGACG
GTAGCGTGGCGATAGTTAACTCTGCTACCTCACACCCTAAGGCCCCAGCA
AGCGGGAAGTACGTCCGCGGGGAGATTTTGCACGGCGTGTTCCACATCAA
GGCGGCGAAGAACAAGAAGCACTCCGAATTCACCATGGTGCACCACTTCA
GCCCGGGCGGAAACATACCGCCCTGGCTGATGAACTGGCTGGCCGAAGGA
AAACCGATTACCTTCGTAAGAAAGCTCGAGGAAGTGGCGAAGAAGTGGGA
TCAGCAGGCTGCGCTCACCAAGAGCATGCCCTGCAAGGGAAGGGGATTTG
CGGACAAGCCGTGCGCCTTTCTGTTGCCAATGGGCGACAGCAGCGAGGAA
GGCGACACGCTGGCGGCGCCGGCAAGAGCGGCGGCAGGAGGCGGCGGCGG
GGAGTGGGGGTCGTTGGCGAAAGCGTTAACCCTGGCGGCGTTGTTGGCGT
ACGCTTGGGCTCTCTTCTTCGATCGCCGGGCAGTGTTCGGGAAGAAGGGA
GGGCCCTCGGCTGCGGGATCAGGCAGGACGCCCGCGGAGGAGAAGAGTGG
AACTCCTCACACCAGGGTGGCGTTGCCTGCCAAGCGCGAGAAACTCGCGG
TGATTTCACCGGAGAAGGCTGCCGGGGTCCCCGCAGTGGCGACCTCGGGA
GCGGCACCCCATGCCCATGCCGACTGTGACAAGGCGGGCCCGGGTGGGAG
AGACGCCAAGGATGTGAGAGGGCCTAGCGGAGACGTACACCACGACGACG
TGCCCATCGCGGAGGATGGTAGCGGCGAGGTCGTGCCTGGCCGAGGAGAG
TTGGCAGGCGCGAGGGCGGAAAAGGAAGACCCCTCGCCAGCACCAGCACG
CGAGGCGCCCAGGGAAGAATGCGGGGCGCTTGCAGAACGGGCGGAAGGTC
CGCCCGCGTCGTGGGATTCTCGCCAAGAGCCCGACACCAGCTTTCTCGAC
GGAGAGATTGCCAGCGGCGGGGTTGCTGGTAAGGTGGAGGGAGATATTTC
AGGCGGAGGGGGTGAGGAGGTGGCGAATGGCGGGCCAAAGGCAGTGGCAA
GTACGGTCGGCGGGGATGCGGGAGATTGCGGCGCAGCAGCGGTCGAAGGC
GCGACTAGCGGAGCAGTCGCCGACACGGGGACGGGCGAGGTAGAGCCGGC
GACCCCAGTAGGGAGAAGCGACACGATCGTTAGCGGGGACAACGCCGGAA
GTGAAGAAGTGGTGATCGCTGAAGTGCGTTCAGTAACGGACGCAGACAGA
GCTTCGATTGCTGTAGCACCAGCGGTGTTTAACGTGGACAACGGAGAGAT
GCCACGTGGCAACATCTCTAGCGAAGAGGTGTGGTCAACGCCGCTGCCCA
TTGAAGAGATTTCGAATGGTGAAGGCAGCTGTGAAATATTGGTAAAAGAG
TGA
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