mRNA_Ecto-sp13_S_contig976.21408.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: D8LR71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR71_ECTSI) HSP 1 Score: 490 bits (1261), Expect = 5.050e-162 Identity = 355/480 (73.96%), Postives = 359/480 (74.79%), Query Frame = 3
Query: 204 GKHLKDDAGKLAQFGITPGKTIMVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGNRPEIELTNQDGEAMAIPPDDSAALMEGMMLHRQGLACLRRARNTAPSRRSPGAAPATVAXXXXXM--GDGHAPPAAAERAPSGVQNKKARRRPQTGXXXXXXXXXXXXXEGALSLRPPSDRGXXXXRPGXWEXXXXSEGIXXXXXXXXXXXXXXXGVAEREGKG-------------------------------------------TVAAPGSPAIDTPPAFGEESGGVASAGDGDAMEVDSDGNHQAGKGSGGSSGRGGGSSGTVRGPRRAAPTLTAAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
GKHLKDDAGKLAQFGITPGKTIMVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGNRPEIELTNQDGEAMAIPPDDSAALMEGMMLHRQGLACLRRARNTAPS RSPGA XXXXX GDGHAPPAAAERAP+GVQNKKAR RPQTG EGAL L+ P+DRG RPG WE SEG XXXXXXXXXX AEREGKG T AAPGSP D PPAFGEESGGVASAGDG TVRGPRR PTLTAAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLD+VWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ
Sbjct: 46 GKHLKDDAGKLAQFGITPGKTIMVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGNRPEIELTNQDGEAMAIPPDDSAALMEGMMLHRQGLACLRRARNTAPSSRSPGAXXXXXXXXXXXXXTGDGHAPPAAAERAPAGVQNKKARHRPQTGPEAAAKAAPGASEEGALRLKSPADRGGGSGRPGGWEERKESEGRSVTQEXXXXXXXXXXXTAEREGKGESSPPRAGIVGRAAAKEQLPERTGAREESTGNEGFTPSPAPEGTAAAPGSPPTDAPPAFGEESGGVASAGDGXXXXXXXXXXXXXXXXX--XXXXXXXXXXTVRGPRRDGPTLTAAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDIVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 523
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: A0A6H5KPY6_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY6_9PHAE) HSP 1 Score: 476 bits (1226), Expect = 1.370e-157 Identity = 329/466 (70.60%), Postives = 338/466 (72.53%), Query Frame = 3
Query: 270 MVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGNRPE----------IELTNQDGEAMAIPPDDSAALMEGMMLHRQGLACLRRARNTAPSRRSPGAAPATVAXXXXXMGDGHAPPAAAERAPSGVQNKKARRRPQTGXXXXXXXXXXXXXEGALSLRPPSDRGXXXXRPGXWEXXXXSEGIXXXXXXXXXXXXXXXGVAEREGKG-------------------------------------------TVAAPGSPAIDTPPAFGEESGGVASAGDGDAMEVDSDGNHQAGKGSGGSSGRGGGSSGTVRGPRRAAPTLTAAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
MVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSAR XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGGNRPE IELTNQDG+AMAIPPDDSAALMEGMMLHRQGLACLRRARNTAPSRRSPGA AXXXX +GDGHAPPA AERAP+ VQNKKARRRPQTG +GALSL+PP+DRG RPG WE S+ G+AEREGKG T AAPGSPA D PPAFGEESGGV SAGDGD MEVDSDGN QAGKGS GT+RGPRRAAPTLTAAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ
Sbjct: 1 MVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSARAARDMASGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGGNRPEVGGSEVKKLKIELTNQDGKAMAIPPDDSAALMEGMMLHRQGLACLRRARNTAPSRRSPGAG---AAXXXXAVGDGHAPPAGAERAPASVQNKKARRRPQTGPQAAVKAAPGASEDGALSLKPPADRGGGSGRPGGWEERKESD--CGSVTQAQAQQQQQGGMAEREGKGESSPPRAGLVGRAAAKEQLPERTGAREESTGNEVFTRSPAPEGTAAAPGSPATDAPPAFGEESGGVDSAGDGDVMEVDSDGNDQAGKGS-XXXXXXXXXXGTMRGPRRAAPTLTAAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 459
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: A0A835Z994_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z994_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.430e-20 Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 3
Query: 1221 AQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
A+ E L L+ AD +FR C +Y VDN+A++CLD WLLFL +D+ N+ S +L +GF ++HG+ L RL ALKG+HC E LY RLHLLQ
Sbjct: 196 ARAEALQYLLEADTSFRSCSEEYRRHVDNHAHVCLDAAWLLFLTRDLSNLQQTSALLTCAAEGFARSHGQDLNRLRALKGDHCPEVALYARLHLLQ 291
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: A0A1A9WA10_9MUSC (Uncharacterized protein n=1 Tax=Glossina brevipalpis TaxID=37001 RepID=A0A1A9WA10_9MUSC) HSP 1 Score: 98.6 bits (244), Expect = 3.620e-18 Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 1230 EGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
E L LL+ ADE F C+ K+LEAVDNYA L LD+VW +K++ + A R L E FR+++GE LQRL LKGE CAEK L +RLHLLQ
Sbjct: 237 EALILLLEADEKFTACNSKFLEAVDNYALLNLDIVWCYLCLKNVTQLPDAQRRLDICENNFRRSYGENLQRLINLKGEGCAEKALIMRLHLLQ 329
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: A0A1B0FHD1_GLOMM (Uncharacterized protein n=6 Tax=Glossina TaxID=7393 RepID=A0A1B0FHD1_GLOMM) HSP 1 Score: 97.8 bits (242), Expect = 6.460e-18 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 1230 EGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
E L LL+ ADE F C+ K+LEAVDNYA + LD+VW +K++ + A R L E FR+++GE LQRL LKG+ CAEK L +RLHLLQ
Sbjct: 237 EALILLLEADEKFTACNSKFLEAVDNYALINLDIVWCYLCLKNVTQLPDAQRRLEICENSFRRSYGENLQRLITLKGDGCAEKALIMRLHLLQ 329
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: A0A1I8N5T3_MUSDO (Uncharacterized protein n=2 Tax=Musca domestica TaxID=7370 RepID=A0A1I8N5T3_MUSDO) HSP 1 Score: 96.3 bits (238), Expect = 2.090e-17 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 1230 EGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
E L LL+ +DE F C+ K+LEAVDNYA + LD+VW +K++ + A R L EK FR+++GE LQRL LKG CAEK L +RLHLLQ
Sbjct: 238 EALILLLESDEKFITCNSKFLEAVDNYALVNLDIVWCYLCLKNVTQLPDAQRRLDICEKSFRRSYGENLQRLITLKGNGCAEKALIMRLHLLQ 330
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: A0A0L0CP88_LUCCU (Uncharacterized protein n=3 Tax=Lucilia TaxID=7374 RepID=A0A0L0CP88_LUCCU) HSP 1 Score: 95.1 bits (235), Expect = 4.890e-17 Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 3
Query: 1230 EGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
E L LL+ ADE F C+ K+LEAVDNYA + LD+VW +K++ + A R L EK FR+++GE QRL +LKG C EK L +RLHLLQ
Sbjct: 238 EALVLLLEADEKFITCNSKFLEAVDNYALVNLDIVWCYLCLKNVTQLPDAQRRLELCEKSFRRSYGENFQRLISLKGSACPEKALIMRLHLLQ 330
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: A0A1I8NVK4_STOCA (Uncharacterized protein n=1 Tax=Stomoxys calcitrans TaxID=35570 RepID=A0A1I8NVK4_STOCA) HSP 1 Score: 94.0 bits (232), Expect = 1.150e-16 Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 1230 EGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
E L LL+ +DE F C+ K+LE+VDNYA + LD+VW +K++ + A R L EK FR+++G+ LQRL LKGE C EK L +RLHLLQ
Sbjct: 238 EALILLLESDEKFVTCNSKFLESVDNYALVNLDIVWCYLCLKNVTQLPDAQRRLDICEKSFRRSYGDNLQRLITLKGEGCPEKALIMRLHLLQ 330
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: W8BSY1_CERCA (NEDD8 ultimate buster 1 n=2 Tax=Ceratitis capitata TaxID=7213 RepID=W8BSY1_CERCA) HSP 1 Score: 93.2 bits (230), Expect = 2.020e-16 Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 3
Query: 1203 AAEKLMAQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
AA K E L LL+ ADE F CD K++E+VDNYA + LD+VW +K++ + A R L E+ FR+++GE + RL ALKG C E+ L +RLHLLQ
Sbjct: 228 AAMKRQHYDEALILLLEADEKFSTCDSKFIESVDNYALINLDIVWCYLCLKNVTQLPDAQRRLNICEQSFRRSYGENMNRLIALKGNACPERALIMRLHLLQ 329
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Match: B4JIN9_DROGR (GH11840 n=1 Tax=Drosophila grimshawi TaxID=7222 RepID=B4JIN9_DROGR) HSP 1 Score: 93.2 bits (230), Expect = 2.030e-16 Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 3
Query: 1230 EGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQ 1508
E L LL+ ADE F CD K+LE+VDNYA L LD+VW +K++ + A R L+ ++ FR+++GE RL ALKG C E+ L +RLHLLQ
Sbjct: 233 EALLLLLEADEQFSACDSKFLESVDNYALLNLDIVWCYLCLKNVSQLPDADRRLSICDRSFRRSYGENYSRLYALKGRVCPERALIMRLHLLQ 325 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig976.21408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig976.21408.1 >prot_Ecto-sp13_S_contig976.21408.1 ID=prot_Ecto-sp13_S_contig976.21408.1|Name=mRNA_Ecto-sp13_S_contig976.21408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=413bp MVLRQDLSEQVEAEAGLTRRTEEAVQAASLLSARAARDMGSGGRGNAWGAback to top mRNA from alignment at Ecto-sp13_S_contig976:851..4618- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig976.21408.1 ID=mRNA_Ecto-sp13_S_contig976.21408.1|Name=mRNA_Ecto-sp13_S_contig976.21408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3768bp|location=Sequence derived from alignment at Ecto-sp13_S_contig976:851..4618- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig976:851..4618- >mRNA_Ecto-sp13_S_contig976.21408.1 ID=mRNA_Ecto-sp13_S_contig976.21408.1|Name=mRNA_Ecto-sp13_S_contig976.21408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1239bp|location=Sequence derived from alignment at Ecto-sp13_S_contig976:851..4618- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |