mRNA_Ecto-sp13_S_contig9737.21376.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: D7FMQ9_ECTSI (Aquarius intron-binding protein similar to aquarius n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ9_ECTSI) HSP 1 Score: 333 bits (853), Expect = 2.920e-101 Identity = 174/191 (91.10%), Postives = 176/191 (92.15%), Query Frame = 1
Query: 79 TLAMGPPYVPGGTTAATVGARKKSSGRAKGKGGAGHRTGAAVPVGAAAAGERKRKRTGGLVTITEINEDELMAVANQNWAPGSKAAAKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVWESLGISEGRLGNLPVTADASSSN 651
TLA GPPYVPGG TAAT GA KKS G+ AGHR GA VP GAAAAGERKRKRTGGLVTITEINEDELMAVANQNWAPGSKAAAKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDA KSSTEHLMSTILLINSKFHEGVSVWESLGISEGRLGNLPVTADASSS+
Sbjct: 261 TLARGPPYVPGGITAATGGAGKKSPGKXXXXXXAGHRAGAPVPAGAAAAGERKRKRTGGLVTITEINEDELMAVANQNWAPGSKAAAKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDAKKSSTEHLMSTILLINSKFHEGVSVWESLGISEGRLGNLPVTADASSSS 451
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: A0A835YQ44_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ44_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.390e-25 Identity = 51/101 (50.50%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 298 VANQNWAPGS-KAAAKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVWESLGI 597
+A+QNWA G+ + A K + P LV+ IY++EL SC P PG RA ++ RLQLLE +++LENYLWP+F A KSS H+MS +L+ N KF G S W+++G+
Sbjct: 1 LAHQNWAAGAPENACKNTISPSLVTKIYKEELHSCGPGPGRRAAANANRRLQLLEVTSYLENYLWPHFHATKSSLPHVMSIVLMANEKFARGFSFWDAVGV 101
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: A0A2K3DR41_CHLRE (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DR41_CHLRE) HSP 1 Score: 106 bits (264), Expect = 2.290e-22 Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 229 ERKRKRTGGLVTITEINEDELMAVANQNWAPGSKAAAKG-SFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVW 582
+++ +R G +T+TEI ED+L A Q W+ ++A +FKP+LV TIY++EL GA R+ LLE S +LENYLWPNFD +K++ EH+MS +L++N KF EGV W
Sbjct: 102 QQQPQRPRGGLTLTEIAEDKLTKTAKQEWSNEARAQENPPAFKPELVQTIYKQELG------GASKRAPGHKRIMLLEISQYLENYLWPNFDVEKATFEHVMSLVLMVNEKFREGVPAW 214
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: A0A8J4B3V0_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4B3V0_9CHLO) HSP 1 Score: 105 bits (261), Expect = 5.720e-22 Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 241 KRTGGLVTITEINEDELMAVANQNWAPGSKAA-AKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVW 582
K+ G L+T+ EI D+L +A +NW+ ++A +FKPKLVS+IYR+EL GA S R+ LLE S +LENYLWPNFD + ++ EH+MS +L++N KF E V W
Sbjct: 77 KQPGSLLTVAEIVTDKLTRIARKNWSNAARARDPPPAFKPKLVSSIYREELG------GASMRGPSFKRVMLLEVSQYLENYLWPNFDPETATFEHVMSIVLMVNEKFRENVPAW 185
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: D8TS23_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TS23_VOLCA) HSP 1 Score: 103 bits (257), Expect = 1.940e-21 Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 241 KRTGGLVTITEINEDELMAVANQNWAPGSKAA-AKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVW 582
K+ G L+T+ EI D+L +A +NW+ ++A +FKPKLVS+IYR EL GA S R+ LLE S +LENYLWPNFD + ++ EH+MS +L++N KF E + W
Sbjct: 106 KQAGSLLTVAEIVTDKLTKLAQRNWSNAARARHPPPTFKPKLVSSIYRDELG------GAGTRGPSFKRVMLLEVSQYLENYLWPNFDPETATFEHVMSIVLMVNEKFRENIPAW 214
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: A0A182NDY5_9DIPT (Aquarius_N domain-containing protein n=1 Tax=Anopheles dirus TaxID=7168 RepID=A0A182NDY5_9DIPT) HSP 1 Score: 99.8 bits (247), Expect = 3.620e-21 Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 253 GLVTITEINEDELMAVANQNWAPGSKAAAKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVWE 585
G +TI++IN DE+ +AN+ WAP + A A + P+++ IYRKE+ S R+ +LEFS +LENYLWPNFD + +S HLMS + ++N KF E V +W+
Sbjct: 17 GAITISQINADEITFLANRFWAPDT-ANAHEPYNPQIIEDIYRKEICDTR---------HSLRRIMMLEFSQYLENYLWPNFDGENASRAHLMSIVAMVNEKFREKVEIWK 117
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: A0A7I8KEV2_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KEV2_SPIIN) HSP 1 Score: 102 bits (254), Expect = 4.720e-21 Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = 1
Query: 253 GLVTITEINEDELMAVANQNWAPGSKAAAKG-SFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVW 582
G +T++EI D L +A NWA G++AAA G FKP+LV IY EL + + G + P R+ +LE S +LENYLWP+FD + +S EH+MS +L++N KF E V+ W
Sbjct: 48 GSITLSEIQRDRLTKIAAANWAKGAEAAAGGREFKPELVREIYETEL---LVSDGRKTVP--LQRVMILEVSQYLENYLWPHFDPETASFEHIMSMVLMVNEKFRENVAAW 153
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: A0A150GH76_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GH76_GONPE) HSP 1 Score: 102 bits (254), Expect = 4.840e-21 Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 223 AGERKRKRTGGLVTITEINEDELMAVANQNWAPGSKAAAKG-SFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVW 582
A ++ +K G +T+ EI D+L +A +NW+ ++ K +F PKLV IYR+EL + GP S R+ LLE S +LENYLWPNFD D +S EH+MS +L++N KF EGV W
Sbjct: 106 AAQQTQKTAGSTLTVAEIATDKLTRLARRNWSIEVQSKEKPPAFNPKLVVQIYRQELGGA-----SNRGP-SLKRIMLLEVSLYLENYLWPNFDPDTASFEHVMSLLLMVNEKFREGVPAW 220
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: A0A182JI35_9DIPT (Aquarius_N domain-containing protein n=2 Tax=Anopheles TaxID=44482 RepID=A0A182JI35_9DIPT) HSP 1 Score: 99.4 bits (246), Expect = 5.360e-21 Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 253 GLVTITEINEDELMAVANQNWAPGSKAAAKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVWE 585
G +T+++IN DE+ +AN+ WAP + A A + P+++ +YRKE+ S R+ +LEFS +LENYLWPNFD +++S HLMS + ++N KF E V VW+
Sbjct: 17 GAITLSQINADEITFLANRFWAPDT-ANAHEPYNPQVIEDVYRKEICDTR---------HSLRRIMMLEFSQYLENYLWPNFDGERASRAHLMSIVAMVNEKFREKVEVWK 117
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Match: A0A182MNY7_9DIPT (Aquarius_N domain-containing protein n=3 Tax=Cellia TaxID=44534 RepID=A0A182MNY7_9DIPT) HSP 1 Score: 99.4 bits (246), Expect = 5.800e-21 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 253 GLVTITEINEDELMAVANQNWAPGSKAAAKGSFKPKLVSTIYRKELRSCMPTPGARAGPESSSRLQLLEFSAFLENYLWPNFDADKSSTEHLMSTILLINSKFHEGVSVWE 585
G +TI++IN DE+ +AN+ WAP + A A ++ P+++ IYRKE+ S R+ +LEFS +LENYLWPNFD +S HLMS + ++N KF E V VW+
Sbjct: 18 GAITISQINADEITFLANRFWAPDT-ANAHEAYNPQIIEDIYRKEICDTR---------HSLRRIMMLEFSQYLENYLWPNFDGQGASRAHLMSIVAMVNEKFREKVEVWK 118 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9737.21376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9737.21376.1 >prot_Ecto-sp13_S_contig9737.21376.1 ID=prot_Ecto-sp13_S_contig9737.21376.1|Name=mRNA_Ecto-sp13_S_contig9737.21376.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp GGRGRGGVASPGGGRGRGRGGGSGSGTLAMGPPYVPGGTTAATVGARKKSback to top mRNA from alignment at Ecto-sp13_S_contig9737:3035..4500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9737.21376.1 ID=mRNA_Ecto-sp13_S_contig9737.21376.1|Name=mRNA_Ecto-sp13_S_contig9737.21376.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1466bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9737:3035..4500+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9737:3035..4500+ >mRNA_Ecto-sp13_S_contig9737.21376.1 ID=mRNA_Ecto-sp13_S_contig9737.21376.1|Name=mRNA_Ecto-sp13_S_contig9737.21376.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9737:3035..4500+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |