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Homology
BLAST of mRNA_Ecto-sp13_S_contig9699.21332.1 vs. uniprot
Match: D8LE39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE39_ECTSI) HSP 1 Score: 1308 bits (3384), Expect = 0.000e+0 Identity = 815/960 (84.90%), Postives = 843/960 (87.81%), Query Frame = 1
Query: 1 QTTFLGSGKPGYRHMHPSESAPVLPNGMKRFPESLAELREHDHGIGIACREDQEGHHQGNVQRRSQRERPWFIDGSQEGHQAGLKRRGSEAGSVHDHDPRDVRDEDDDNALTRSMTVHRPFDGQNDSGPAPVFLWKGHNYLAKLAHDLEFLDDADASAPVSAWLGFSVRDNPFLIPPNGLDVCEDLRRKXXXXXXXXXXXXXXXXXHQRPGGTGNRQRRLSRXXXXXXXXXXXXXXXXXXXXXXXKHRRTYASGDVAAPLPRGQRKQEPKQGRNPDSDIKGRDARPEPMVLTPQQPSAPPMADADANDGGRKRKSGSATENAVTASPLLLITDDQNDGVDGGGGTFVTEGVARSAFSTAAA-EGSLRSASTSVESPLFPAGLGYLDDENTIPHQLSTDEEEELHWAGGGRLDLPIVPELHESVRSKALAAAKVLRSEAASEQALTSSARAILSNARRTEGILHTPERDCSFRMESLAERSVREGLRGALVDRHVGATSLKLSPSLLKSSSCAMMGMSPCWRDKKEGPPLVRSVSTAPARGGGRPGLTVVCSGAAAGRGRAGAARLGHGRALAAFGSRGGGGGSSRGGVRVSVDGHHEATDGAIAGAGKGSSDPSRYTQSVPRDGNSTNNRNGKGKRAPPPSSRSQCLESGTGSETHTTRLGGTNEGTADTAAVSAASPGDRSTTSSSLQASSSTMSARARAKALAVRPTARRRPFRRNGGGKVIIPDPGVSADVRRRAAARIQSALLALCARRYVRGLRDDRDRAVXXXXXXXXXXXAKADMRTARRLRRAEGLRRVAEERSRNRAAHVIQTFSRDVRYRRERERREMSLRGDPGALANQLQEENAAIAVQVHVRRLIASKRVRGVRHARRAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTGGGDQDISNYLEMATITTKPLSLQPDEAATRIQAWRRGVYYRRVAGVAATQAAR 2877
+TTFLGSGKPGYR MHPSESA V NGM RF ES AE +EHDH IGI R D+EGH QGN QR SQRE P ID S EG QAGLKRR S A S+H H+P DVRDEDDDNALTRS+TV RPF G+NDS PAPVFLWKGHNYL KLAHDLEFLDDAD SAPVSAWLGFSVRDNPFLIPPNGL+VCEDLRR+ XXXXXXXXXXXXXXXHQR GGTGN QRRLSRXXXXXXXXXXXXXXXXXXXXXXX DIKGRDARP+PMVLTPQQ SAPPMADADAND GR+RKS SATEN VT SPLLL+TDDQ DGVDGGGG FVTEGVARSAFSTAAA EGSLRSASTSVESPLFP GLGY DDENTIPHQLSTDEEEEL WAGGGRLDLPIVP+LHESVRSKALAAA+VLRSEAASEQALTSSARAILSNARRTEGILHTPE+DCSFRMESLAERSVREGLRGALVDRHVGAT LK SPSLLKSSSC MMGMSPC R++ E PP VRSVSTAPARGGGRPGL V+CSGAAA RGRAGAARLGH RALAAFGSRGGGGGSSRGGVRVSVDGH EATDGAIAGAGKGSSDPSR TQSVPRDGN+TNNRN KGKRAP PSSRSQCLESGTGSET TTRLGGTNEGTADT AVSAA PGDRSTTSSSLQASSSTMSARARAKALAVRPTARRRPF RNGGG+VIIPDPGVS DVRRRAAARIQ+ALLALCARRYVRGLRDDRDRAV AKADMRTARRLRRAEGLRRVAEERSRNRAAHV+QTF RDV+YRRER+R EMSLRGDPGALA+QL+EE AAIAVQVHVRRLIASKRVRGVRH RRAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGGGDQD+S YLEMAT+ TKPLSLQPDEAATRIQAWRRGVYYRRVAGVAA QAAR
Sbjct: 132 RTTFLGSGKPGYRRMHPSESALVRSNGMTRFLESPAEFQEHDHDIGIVYRGDEEGHLQGNKQRHSQREHPGLIDASPEGQQAGLKRRSSAAESMHHHEPHDVRDEDDDNALTRSITVPRPFVGKNDSNPAPVFLWKGHNYLTKLAHDLEFLDDADESAPVSAWLGFSVRDNPFLIPPNGLNVCEDLRRQREXXXXXXXXXXXXXXXHQRSGGTGNGQRRLSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXDIKGRDARPKPMVLTPQQQSAPPMADADANDEGRQRKSESATENVVTTSPLLLVTDDQRDGVDGGGGIFVTEGVARSAFSTAAAAEGSLRSASTSVESPLFPPGLGYSDDENTIPHQLSTDEEEELQWAGGGRLDLPIVPKLHESVRSKALAAAQVLRSEAASEQALTSSARAILSNARRTEGILHTPEKDCSFRMESLAERSVREGLRGALVDRHVGATRLKWSPSLLKSSSCVMMGMSPCCREE-ERPPFVRSVSTAPARGGGRPGLAVICSGAAAARGRAGAARLGHRRALAAFGSRGGGGGSSRGGVRVSVDGHREATDGAIAGAGKGSSDPSRCTQSVPRDGNNTNNRNEKGKRAPLPSSRSQCLESGTGSETSTTRLGGTNEGTADTTAVSAAPPGDRSTTSSSLQASSSTMSARARAKALAVRPTARRRPFCRNGGGRVIIPDPGVSPDVRRRAAARIQAALLALCARRYVRGLRDDRDRAVRLIWRNWRRCRAKADMRTARRLRRAEGLRRVAEERSRNRAAHVVQTFFRDVKYRRERDRHEMSLRGDPGALASQLREETAAIAVQVHVRRLIASKRVRGVRHTRRAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGGDQDVSYYLEMATMRTKPLSLQPDEAATRIQAWRRGVYYRRVAGVAAAQAAR 1082
BLAST of mRNA_Ecto-sp13_S_contig9699.21332.1 vs. uniprot
Match: A0A6H5J5B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5B3_9PHAE) HSP 1 Score: 1165 bits (3013), Expect = 0.000e+0 Identity = 694/824 (84.22%), Postives = 715/824 (86.77%), Query Frame = 1
Query: 1 QTTFLGSGKPGYRHMHPSESAPVLPNGMKRFPESLAELREHDHGIGIACREDQEGHHQGNVQRRSQRERPWFIDGSQEGHQAGLKRRGSEAGSVHDHDPRDVRDEDDDNALTRSMTVHRPFDGQNDSGPAPVFLWKGHNYLAKLAHDLEFLDDADASAPVSAWLGFSVRDNPFLIPPNGLDVCEDLRRKXXXXXXXXXXXXXXXXXHQRPGGTGNRQRRLSRXXXXXXXXXXXXXXXXXXXXXXXKHRRTYASGDVAAPLPRGQRKQEPKQGRNPDSDIKGRDARPEPMVLTPQQPSAPPMADADANDGGRKRKSGSATENAVTASPLLLITDDQNDGVDGGGGTFVTEGVARSAFSTAAAEGSLRSASTSVESPLFPAGLGYLDDENTIPHQLSTDEEEELHWAGGGRLDLPIVPELHESVRSKALAAAKVLRSEAASEQALTSSARAILSNARRTEGILHTPERDCSFRMESLAERSVREGLRGALVDRHVGATSLKLSPSLLKSSSCAMMGMSPCWRDKKEGPPLVRSVSTAPARGGGRPGLTVVCSGAAAGRGRAGAARLGHGRALAAFGSRGGGGGSSRGGVRVSVDGHHEATDGAIAGAGKGSSDPSRYTQSVPRDGNSTNNRNGKGKRAPPPSSRSQCLESGTGSETHTTRLGGTNEGTADTAAVSAASPGDRSTTSSSLQASSSTMSARARAKALAVRPTARRRPFRRNGGGKVIIPDPGVSADVRRRAAARIQSALLALCARRYVRGLRDDRDRAVXXXXXXXXXXXAKADMRTARRLRRAEGLRRVAEERSRNRAAHVIQTFSRDVRYRRERER 2472
+TTFLGSGKPGYR MHPSESAP LPNGM RFPE LAE +EHDHGIG+ CREDQEGHHQGN Q+ SQR PWFID SQEGHQAGLKRRGSE GSVH HDP D+RDE DDNALTRS+ V RPF G+NDSGPAP+FLWKG+NYL K+AHDLEFLDDADASAPVSAWLGFSVRDNPFLIPPNGL+VCEDLRR+ XXXXH+R GTGN XXXXXXXXXXXXXXXXXXXXXXX DV+APLPR Q KQE KQGR+PDSDIKG DARPEPMVLTPQQ SAPP ADADAND GRKRKSGSATEN VT S G FVTEGVARSAFSTAAAEGSLRSASTSVESPLFPAGLGY +DENTIP+QLSTDEEEEL WAGGGRLD PIVPELHESVRSKALAAAKVLRSEAASEQALTSSARAILSNARRTE ILHTPERDCSFRMESLAERSVRE LRGALVDRHVGAT LKL PSLLKSS CAMM MS CWR++KE PP VRSVSTAPARGGGRPGLTVVCSG AA RGRAGAARLGHGRA AAFGSRGGGGGSSRGGVRVSVDGHHEATDGAIAGAGK SSDPSR TQSVPRDGN TNNR KGKRAP PSSRSQCLESGTGS+THTTRLGGTNEGTADTAAVSAASPGDRSTTSSSLQASSSTMSARARAKAL VRPTARRRPF RNGG +VIIPDPGVSADVRRRAAARIQSALLALCARRYVRGLRDDRDRAV XXXXXXX KADMRTARRLRRAEGLRRVAEERSRNRA HVIQTF RDVRYRRER R
Sbjct: 359 RTTFLGSGKPGYRRMHPSESAPGLPNGMTRFPEPLAEFQEHDHGIGVVCREDQEGHHQGNRQKHSQRGHPWFIDASQEGHQAGLKRRGSEDGSVHHHDPHDLRDEVDDNALTRSIAVPRPFGGKNDSGPAPLFLWKGNNYLTKMAHDLEFLDDADASAPVSAWLGFSVRDNPFLIPPNGLNVCEDLRRQREERREEAAVPRRXXXXHKRSPGTGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXDVSAPLPRRQSKQERKQGRDPDSDIKGSDARPEPMVLTPQQQSAPPTADADANDEGRKRKSGSATENVVTTSXXXXXXXXXXXXXXXXXGIFVTEGVARSAFSTAAAEGSLRSASTSVESPLFPAGLGYSNDENTIPYQLSTDEEEELQWAGGGRLDQPIVPELHESVRSKALAAAKVLRSEAASEQALTSSARAILSNARRTEEILHTPERDCSFRMESLAERSVREELRGALVDRHVGATRLKLLPSLLKSS-CAMMRMSSCWREEKERPPFVRSVSTAPARGGGRPGLTVVCSGTAAARGRAGAARLGHGRASAAFGSRGGGGGSSRGGVRVSVDGHHEATDGAIAGAGKRSSDPSRCTQSVPRDGNITNNRIEKGKRAPLPSSRSQCLESGTGSQTHTTRLGGTNEGTADTAAVSAASPGDRSTTSSSLQASSSTMSARARAKALTVRPTARRRPFCRNGGCRVIIPDPGVSADVRRRAAARIQSALLALCARRYVRGLRDDRDRAVRLIWXXXXXXXTKADMRTARRLRRAEGLRRVAEERSRNRATHVIQTFFRDVRYRRERVR 1179
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3443 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Cds size | 3267 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464233.2676122-UTR-Ecto-sp13_S_contig9699:1..135 | 1681464233.2676122-UTR-Ecto-sp13_S_contig9699:1..135 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig9699 2..135 - |
| 1681464233.3329134-UTR-Ecto-sp13_S_contig9699:6110..6152 | 1681464233.3329134-UTR-Ecto-sp13_S_contig9699:6110..6152 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig9699 6111..6152 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464233.2780583-CDS-Ecto-sp13_S_contig9699:135..313 | 1681464233.2780583-CDS-Ecto-sp13_S_contig9699:135..313 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9699 136..313 - |
| 1681464233.2874296-CDS-Ecto-sp13_S_contig9699:1000..1251 | 1681464233.2874296-CDS-Ecto-sp13_S_contig9699:1000..1251 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9699 1001..1251 - |
| 1681464233.296737-CDS-Ecto-sp13_S_contig9699:1756..1867 | 1681464233.296737-CDS-Ecto-sp13_S_contig9699:1756..1867 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9699 1757..1867 - |
| 1681464233.3059378-CDS-Ecto-sp13_S_contig9699:2528..2768 | 1681464233.3059378-CDS-Ecto-sp13_S_contig9699:2528..2768 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9699 2529..2768 - |
| 1681464233.3150072-CDS-Ecto-sp13_S_contig9699:3170..3233 | 1681464233.3150072-CDS-Ecto-sp13_S_contig9699:3170..3233 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9699 3171..3233 - |
| 1681464233.3240004-CDS-Ecto-sp13_S_contig9699:3686..6110 | 1681464233.3240004-CDS-Ecto-sp13_S_contig9699:3686..6110 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig9699 3687..6110 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9699.21332.1 >prot_Ecto-sp13_S_contig9699.21332.1 ID=prot_Ecto-sp13_S_contig9699.21332.1|Name=mRNA_Ecto-sp13_S_contig9699.21332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1089bp
MHPSESAPVLPNGMKRFPESLAELREHDHGIGIACREDQEGHHQGNVQRR
SQRERPWFIDGSQEGHQAGLKRRGSEAGSVHDHDPRDVRDEDDDNALTRS
MTVHRPFDGQNDSGPAPVFLWKGHNYLAKLAHDLEFLDDADASAPVSAWL
GFSVRDNPFLIPPNGLDVCEDLRRKREERREEAAVRRRQQQQHQRPGGTG
NRQRRLSRSRCRSRANSHDDDDDDDDDDDDDKHRRTYASGDVAAPLPRGQ
RKQEPKQGRNPDSDIKGRDARPEPMVLTPQQPSAPPMADADANDGGRKRK
SGSATENAVTASPLLLITDDQNDGVDGGGGTFVTEGVARSAFSTAAAEGS
LRSASTSVESPLFPAGLGYLDDENTIPHQLSTDEEEELHWAGGGRLDLPI
VPELHESVRSKALAAAKVLRSEAASEQALTSSARAILSNARRTEGILHTP
ERDCSFRMESLAERSVREGLRGALVDRHVGATSLKLSPSLLKSSSCAMMG
MSPCWRDKKEGPPLVRSVSTAPARGGGRPGLTVVCSGAAAGRGRAGAARL
GHGRALAAFGSRGGGGGSSRGGVRVSVDGHHEATDGAIAGAGKGSSDPSR
YTQSVPRDGNSTNNRNGKGKRAPPPSSRSQCLESGTGSETHTTRLGGTNE
GTADTAAVSAASPGDRSTTSSSLQASSSTMSARARAKALAVRPTARRRPF
RRNGGGKVIIPDPGVSADVRRRAAARIQSALLALCARRYVRGLRDDRDRA
VRLIWRNWRRWRAKADMRTARRLRRAEGLRRVAEERSRNRAAHVIQTFSR
DVRYRRERERREMSLRGDPGALANQLQEENAAIAVQVHVRRLIASKRVRG
VRHARRAQAQARIALAVRHRAARIQQREREQREEQEQRGRTGGGDQDISN
YLEMATITTKPLSLQPDEAATRIQAWRRGVYYRRVAGVAATQAARREETP
TMTTAKEPPRRNQGSSKSAHLRAALEALQAAHSAVALSKKSTSDDERRRH
TSSQDVIRKTAEERNPRQVRTQWHQNPMNVGRNGTKDTAAALLVDGLSSR
SESPRVDELRRLEARVSERRNTPCSPARARRANPSRER* back to topmRNA from alignment at Ecto-sp13_S_contig9699:2..6152- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig9699.21332.1 ID=mRNA_Ecto-sp13_S_contig9699.21332.1|Name=mRNA_Ecto-sp13_S_contig9699.21332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6151bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9699:2..6152- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACGACGTTCCTTGGGTCCGGAAAACCAGGGTATCGTCACATGCACCC
TAGCGAATCAGCCCCGGTTCTGCCCAACGGAATGAAGCGATTCCCGGAAT
CGCTCGCAGAACTTCGGGAACATGATCATGGCATCGGTATTGCCTGCCGT
GAAGATCAAGAAGGGCATCATCAAGGCAACGTGCAGAGGCGCAGCCAGAG
AGAACGCCCGTGGTTTATCGACGGTTCGCAGGAGGGACACCAAGCCGGAC
TCAAGCGCCGCGGCAGCGAAGCCGGGAGCGTGCACGACCATGACCCACGC
GACGTTCGCGATGAGGACGATGACAACGCGCTCACGCGGTCGATGACCGT
CCATCGGCCTTTCGACGGCCAGAACGACAGCGGCCCGGCCCCTGTGTTCC
TCTGGAAGGGCCACAACTACCTCGCCAAGCTGGCCCATGATCTAGAGTTT
CTCGACGACGCTGACGCGTCCGCTCCGGTCTCCGCTTGGCTTGGCTTCTC
GGTCCGAGACAATCCGTTCCTCATCCCTCCGAACGGGCTCGACGTTTGCG
AGGATCTTCGACGGAAGCGCGAGGAGCGCCGTGAGGAGGCGGCCGTGCGG
CGACGGCAGCAACAGCAACACCAGCGCCCCGGGGGCACAGGCAACCGGCA
GAGACGCCTGTCCCGCTCTCGGTGTCGATCCCGAGCGAACAGCCACGACG
ACGACGACGACGACGACGACGACGACGACGACGACAAACACCGACGCACG
TACGCCAGCGGCGATGTCGCTGCACCTCTGCCTCGCGGGCAACGCAAGCA
AGAACCAAAACAAGGCCGCAATCCCGACAGCGACATCAAGGGTCGTGATG
CACGGCCAGAGCCGATGGTGCTAACGCCGCAGCAACCGTCGGCGCCGCCC
ATGGCGGATGCAGACGCGAACGACGGAGGTCGGAAGCGAAAGTCAGGATC
GGCAACCGAAAACGCGGTGACGGCCAGCCCGTTGTTGCTGATCACCGATG
ATCAAAACGATGGCGTGGATGGTGGGGGTGGAACTTTTGTCACTGAGGGC
GTGGCGAGGAGCGCTTTTTCGACGGCGGCGGCGGAAGGCAGCCTCCGCTC
GGCGTCAACGTCGGTCGAATCCCCGCTTTTCCCGGCGGGTCTTGGGTATT
TGGACGACGAGAACACCATCCCGCACCAACTGTCAACGGACGAAGAGGAG
GAGTTGCATTGGGCGGGAGGAGGGCGACTCGACCTGCCCATCGTCCCCGA
GCTTCACGAGTCAGTCCGCTCCAAAGCTCTGGCCGCGGCGAAGGTACTCC
GGAGCGAGGCTGCCTCCGAACAAGCGCTCACGTCGAGCGCCCGGGCGATC
CTCTCCAACGCCAGGCGCACGGAAGGGATCTTGCACACTCCGGAGAGAGA
CTGCTCCTTTAGGATGGAGTCGCTGGCCGAGCGGAGTGTCAGGGAGGGGC
TCAGAGGCGCGCTGGTGGACAGGCACGTCGGCGCGACAAGTCTAAAGTTA
TCACCGTCGTTGTTGAAGTCCTCCTCTTGTGCGATGATGGGAATGTCACC
GTGCTGGAGGGACAAAAAAGAGGGGCCTCCGCTCGTTCGGTCGGTGTCCA
CGGCGCCCGCGAGGGGCGGTGGCCGTCCAGGGCTCACCGTGGTTTGCTCC
GGCGCCGCTGCTGGAAGGGGTCGGGCGGGCGCGGCGCGGCTAGGCCACGG
CCGAGCGTTGGCGGCTTTCGGCAGCAGGGGCGGCGGCGGCGGCAGCAGCC
GGGGAGGGGTCCGCGTCTCGGTAGATGGGCATCACGAGGCAACGGACGGG
GCGATAGCTGGAGCGGGAAAAGGAAGCAGCGATCCCTCGAGATATACCCA
GAGCGTACCGAGAGACGGCAACAGCACGAATAACCGCAACGGAAAGGGAA
AGCGTGCGCCGCCGCCCTCCTCCCGATCGCAGTGCCTCGAAAGCGGCACC
GGATCAGAAACGCACACGACAAGGCTGGGCGGGACTAATGAGGGAACCGC
CGACACGGCTGCTGTATCCGCCGCTTCTCCCGGGGACCGGTCCACGACCT
CCTCTTCCCTGCAGGCCAGCTCCTCGACTATGTCGGCCCGGGCGCGAGCC
AAGGCGCTCGCGGTCCGCCCCACAGCCAGGCGCCGCCCGTTCCGTCGGAA
CGGCGGCGGCAAGGTAATCATTCCAGACCCGGGGGTATCCGCGGATGTCC
GTCGCCGGGCGGCGGCGCGGATCCAGTCGGCGTTACTGGCCTTGTGCGCG
AGACGGTACGTTCGCGGGCTGCGGGACGACCGCGATCGTGCGGTAAGGTT
GATTTGGCGAAACTGGCGCAGGTGGAGGGCCAAGGCGGACATGCGAACCG
CGAGACGCTTGAGGCGCGCCGAGGGCCTGCGGCGGGTAGCGGAGGAAAGG
TCGAGGAACCGCGCCGCTCACGTCATCCAGACGTTCTCCAGGGACGTCAG
ATACAGACGGGAAAGGGTGAGGGAGAGAGACGCAAGGCGCCTCTCTCGAC
TTCAAGTACGACGAAGGGGGACATAGACAAAAAAAAAAATTGTCTGAGCG
TTGGGCTCTATCTATGGCTTGAGGAAGAGGACCAACAGCAAGTATCGTAG
TCCCCGCCCACCGTGTGTCTGGCTTGGCTTCGAAGGGCACCTGACACGGC
ATCACAGAATCCCGTAACGATGGAGCCAAACACCGAAACTCTCTTGTGTC
GTCTCTTTTGTAGATTGTCCGAGCCCCCTGTTTCAGTATCCCCGATGCCA
TCGTTCTCCATCTTGTGTATGCACATAATTATGCGTGTGCATTCGCGCGC
TACCTGTTTCCCGTGGCCTCCCAAAAATACTCCCCCCCACTTTATGCGGC
GGTCGTGGCAACGGCGGTGGCGGTGGCGGCGGTGATACCTTTTTTTCTCC
CCTCTCTTCTTTTCGTCAGGAACGACGTGAAATGTCCCTCCGGGGGGATC
CTGGAGCCTTAGCAAACCAGCTGCAGGAGGAGGTAAGCACGTGCCATGTA
TGGGACGGGGCATATCTGCGCGGTTTCCTTGTTGCACGCTTCTCCCTCCT
ATGTGTACAAAGGAGCTTTCTGCCACCCGCTCTAGTATACATTTTCCTCT
TGGGCGAAGAAGCAAAGTACTGTAGCAAGATCCGCCGGCACACGCACATC
TATCCGACCCACAAGCGTGTGTAGTCACTTGGGCAAATAAGTTAATTCGC
CCTGTTCGCGGCATCGCGGCATCCAACGGACATCAACCAAACGAAAGCTG
TGTTAGTCTGCAGCACGTTGTCGTGGAGTTCGGTTCCCTGTTTTTCTCAC
TCCCTACCTCGTGCTGTTGCGCCCCCTGTGAGCAATACCCGTACTCCCCT
GGCGTTGTTCACATCGCTCGTCCGCAAACCACAGAACGCTGCGATCGCAG
TGCAGGTTCACGTCCGTCGACTCATAGCTTCCAAGAGAGTGAGGGGGGTG
CGACACGCTCGACGCGCGCAAGCTCAGGCCCGCATCGCTCTTGCCGTGCG
GCATCGAGCTGCGCGCATCCAGCAGAGAGAGAGAGAGCAGCGAGAGGAGC
AAGAACAACGAGGGCGAACAGGAGGAGGGGATCAAGACATCTCCAACTAC
CTCGAGATGGCAACGATTACAACAGTGAGTTGAGAACACAGCGAAGCATT
GAGAGGCTTGGCCGAACTGAATGCGCTGATTGAGGGTGCATGTCAAAGTG
CGTTTGGTCCTTGGGCAAGAAGTATTGGTAGATAGTTCTGATCGAGATCC
ATTTTTTTCGGCCGGATTTGTTCATGCTTGTTTATGGAGGAAGGCGACTC
CCGAGAAACTTTGGGACACAAACACAGGGAATGTTCCTTTGACGTTGCTT
GAATACAGAATGTAAGCAGTCACATCAAAAGAAGCTGTCGCATCAAAGCA
TCGTGTGGTTTCTGCAAAGGGTTGCTGGTGCCGTCCCCGTGTTCCTCGTA
TGAGACTCGATCCGCTACAAAGTACAGGCTATACTTGCTCAATGGCATCG
AGGAGTCCTGAAGCGATCTGCGGTAAGAATTAGTAAATCAACTCTCCCTT
TGGGGTAGACACCTGGGGATGTGAAACGAGGGAATCGTACTCGATAGACG
TTGCGGAAACGTGACTTTTCGTGTAAGGCCACCTCCACACCACGGTCATT
GGCTATCGTGCCTTGGAGATGTGTATTGGGGATGAGCGCATGTATACGAT
GCGCTCGGAAAGCTTTAGCCGACATCGCTTCGCCCACTTGCCTGTACCCG
ACGTTTGTTGCCGTCCGTTGTTTTTCACGCAACAGAAACCTTTGTCGCTT
CAGCCTGACGAGGCGGCCACGCGAATACAGGCCTGGCGACGCGGGGTCTA
CTACCGACGAGTTGCTGGCGTAGCAGCGACCCAAGCCGCGCGGCGGGTAA
GAACGCGTCCGTTTCTTTCTCCCTCAGGTGCTGAATATGCACGCCGTGCC
TCGTAGACTTGTTTGTACGAACGTGCGGAAACTCCAATGACGGGCGTGTC
GGATGTGGGGAACCCGTGTATTTACCAAACAGAAGATTATGAAGAAGTGA
ATCGATTCGCCGCCAGCCGATCGGGTTCCGGTGATAAAAGCCTGCTTCTT
GCCTAGCGACCAAGAAGAGGGCTCTGAAAGGGGATGAAATGAGGAGGTCC
CTTTCACGAAGGGTGCAATCTCCCCAACGTCTGTCGGATCCTCCTGTCAC
ACATTGTGCACAACACTCTTGACAGCGGTAGTCGTGCAAGTCCTATAAGG
CGAGTCGCACCCGTGCGTCGTGCCGACTGCTCAACGGAGCATCAAACTTG
TAAGACAAAGAAGTGTTATCAATCAGAACATCCAAAGATCGGCGACCGGC
AAACAGTGAATAAAATGAGAAAAACGTGGCGATGATCATACGCACTTGCA
GGAGGAGACACCGACGATGACGACGGCGAAAGAGCCTCCCCGCCGCAATC
AAGGCAGCAGCAAGAGTGCGCACCTGCGGGCTGCTCTTGAAGCCCTGCAG
GCGGCGCACTCCGCTGTAGCTCTGTCGAAAAAGTCTACTTCCGACGACGA
AAGAAGAAGGCACACAAGCAGCCAGGATGTGATACGGAAAACCGCGGAGG
AGAGAAACCCAAGGCAAGTACGCACGCAATGGCATCAAAACCCCATGAAT
GTGTCATGGTGAGTGCCAAACTTGCAAGCCACACCCAAGGAGAGACTACT
CTCTGCCGCCTGTTGTCAAAAAGTTATTTTTCATTTGCTCCCCGGAAGGT
TGGAAAAACACTTGCTTCAAGATAGTACATATTCTTGTGTCACTTGATGT
TTTTCCAAAGGTATTGGGTCCTTACACATTTGGTTTGATCATAGACCCAA
CGCCTGTCTTGGCTCTTAGGGGGCTCTGCCGTTATTCTTCATTTTTGGGT
GCTCGTCTTTCCCTTGTGTACGCAAAGCTGGCGTGGGCCATTCTCCGAAA
TGGAGCTTGAGTTATCCTGCACTTCAAGCGTTGTGGGAAATCCAATTATT
GTTCATGCCTTTCACGCGGGATCTGTTCCGGTCTGATTTCCGTCCACATA
TAGATCTAGACCCAGACCTATATTTTGGCTAACTGAGCACGATGGACGTA
AAACTCCTGACAAAGCCAAGAGTAGATGAGCCAGTGCGACTCATAGAGAC
TCTCATGGGCTTCTCCTGGAAAATACTATCGCATGGTTCGAGGGCAGCGG
GCTAAGAAGGATGCAGGATAATGACGCCAGGAAACGATAAGCTGTAGAGG
GCGGTGTCCATTGCAGCAAGCAGCAGCAACTTCCGTCCCTGCCCGTTCAT
GAAAAAATCCGTGCACACCGACTCTGGACGACCGCGCAGGGGTCGGAACG
GCACTAAAGACACAGCAGCCGCGCTTCTAGTGGATGGGCTGTCCTCACGC
AGTGAAAGCCCGCGTGTCGACGAGCTGAGGCGGTTGGAGGCGAGGGTGTC
GGAGAGGAGGAACACGCCTTGCTCGCCTGCAAGAGCGCGGCGAGCCAATC
CCTCCCGAGAGAGATGAAGGATGTGTTCGCCGGTTGGCTGCTTCCGCTAC
CGCTGCGTCAATCGGCATCGTCAACATTTCTCTCATTGGCAGCTCTGTTT
TTCGATGGTGGTGCCTTTTAGTGGTTGCCATGGACGTTGCTTTTTTTCGA
A back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig9699:2..6152- >mRNA_Ecto-sp13_S_contig9699.21332.1 ID=mRNA_Ecto-sp13_S_contig9699.21332.1|Name=mRNA_Ecto-sp13_S_contig9699.21332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9699:2..6152- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCACCCTAGCGAATCAGCCCCGGTTCTGCCCAACGGAATGAAGCGATT
CCCGGAATCGCTCGCAGAACTTCGGGAACATGATCATGGCATCGGTATTG
CCTGCCGTGAAGATCAAGAAGGGCATCATCAAGGCAACGTGCAGAGGCGC
AGCCAGAGAGAACGCCCGTGGTTTATCGACGGTTCGCAGGAGGGACACCA
AGCCGGACTCAAGCGCCGCGGCAGCGAAGCCGGGAGCGTGCACGACCATG
ACCCACGCGACGTTCGCGATGAGGACGATGACAACGCGCTCACGCGGTCG
ATGACCGTCCATCGGCCTTTCGACGGCCAGAACGACAGCGGCCCGGCCCC
TGTGTTCCTCTGGAAGGGCCACAACTACCTCGCCAAGCTGGCCCATGATC
TAGAGTTTCTCGACGACGCTGACGCGTCCGCTCCGGTCTCCGCTTGGCTT
GGCTTCTCGGTCCGAGACAATCCGTTCCTCATCCCTCCGAACGGGCTCGA
CGTTTGCGAGGATCTTCGACGGAAGCGCGAGGAGCGCCGTGAGGAGGCGG
CCGTGCGGCGACGGCAGCAACAGCAACACCAGCGCCCCGGGGGCACAGGC
AACCGGCAGAGACGCCTGTCCCGCTCTCGGTGTCGATCCCGAGCGAACAG
CCACGACGACGACGACGACGACGACGACGACGACGACGACGACAAACACC
GACGCACGTACGCCAGCGGCGATGTCGCTGCACCTCTGCCTCGCGGGCAA
CGCAAGCAAGAACCAAAACAAGGCCGCAATCCCGACAGCGACATCAAGGG
TCGTGATGCACGGCCAGAGCCGATGGTGCTAACGCCGCAGCAACCGTCGG
CGCCGCCCATGGCGGATGCAGACGCGAACGACGGAGGTCGGAAGCGAAAG
TCAGGATCGGCAACCGAAAACGCGGTGACGGCCAGCCCGTTGTTGCTGAT
CACCGATGATCAAAACGATGGCGTGGATGGTGGGGGTGGAACTTTTGTCA
CTGAGGGCGTGGCGAGGAGCGCTTTTTCGACGGCGGCGGCGGAAGGCAGC
CTCCGCTCGGCGTCAACGTCGGTCGAATCCCCGCTTTTCCCGGCGGGTCT
TGGGTATTTGGACGACGAGAACACCATCCCGCACCAACTGTCAACGGACG
AAGAGGAGGAGTTGCATTGGGCGGGAGGAGGGCGACTCGACCTGCCCATC
GTCCCCGAGCTTCACGAGTCAGTCCGCTCCAAAGCTCTGGCCGCGGCGAA
GGTACTCCGGAGCGAGGCTGCCTCCGAACAAGCGCTCACGTCGAGCGCCC
GGGCGATCCTCTCCAACGCCAGGCGCACGGAAGGGATCTTGCACACTCCG
GAGAGAGACTGCTCCTTTAGGATGGAGTCGCTGGCCGAGCGGAGTGTCAG
GGAGGGGCTCAGAGGCGCGCTGGTGGACAGGCACGTCGGCGCGACAAGTC
TAAAGTTATCACCGTCGTTGTTGAAGTCCTCCTCTTGTGCGATGATGGGA
ATGTCACCGTGCTGGAGGGACAAAAAAGAGGGGCCTCCGCTCGTTCGGTC
GGTGTCCACGGCGCCCGCGAGGGGCGGTGGCCGTCCAGGGCTCACCGTGG
TTTGCTCCGGCGCCGCTGCTGGAAGGGGTCGGGCGGGCGCGGCGCGGCTA
GGCCACGGCCGAGCGTTGGCGGCTTTCGGCAGCAGGGGCGGCGGCGGCGG
CAGCAGCCGGGGAGGGGTCCGCGTCTCGGTAGATGGGCATCACGAGGCAA
CGGACGGGGCGATAGCTGGAGCGGGAAAAGGAAGCAGCGATCCCTCGAGA
TATACCCAGAGCGTACCGAGAGACGGCAACAGCACGAATAACCGCAACGG
AAAGGGAAAGCGTGCGCCGCCGCCCTCCTCCCGATCGCAGTGCCTCGAAA
GCGGCACCGGATCAGAAACGCACACGACAAGGCTGGGCGGGACTAATGAG
GGAACCGCCGACACGGCTGCTGTATCCGCCGCTTCTCCCGGGGACCGGTC
CACGACCTCCTCTTCCCTGCAGGCCAGCTCCTCGACTATGTCGGCCCGGG
CGCGAGCCAAGGCGCTCGCGGTCCGCCCCACAGCCAGGCGCCGCCCGTTC
CGTCGGAACGGCGGCGGCAAGGTAATCATTCCAGACCCGGGGGTATCCGC
GGATGTCCGTCGCCGGGCGGCGGCGCGGATCCAGTCGGCGTTACTGGCCT
TGTGCGCGAGACGGTACGTTCGCGGGCTGCGGGACGACCGCGATCGTGCG
GTAAGGTTGATTTGGCGAAACTGGCGCAGGTGGAGGGCCAAGGCGGACAT
GCGAACCGCGAGACGCTTGAGGCGCGCCGAGGGCCTGCGGCGGGTAGCGG
AGGAAAGGTCGAGGAACCGCGCCGCTCACGTCATCCAGACGTTCTCCAGG
GACGTCAGATACAGACGGGAAAGGGAACGACGTGAAATGTCCCTCCGGGG
GGATCCTGGAGCCTTAGCAAACCAGCTGCAGGAGGAGAACGCTGCGATCG
CAGTGCAGGTTCACGTCCGTCGACTCATAGCTTCCAAGAGAGTGAGGGGG
GTGCGACACGCTCGACGCGCGCAAGCTCAGGCCCGCATCGCTCTTGCCGT
GCGGCATCGAGCTGCGCGCATCCAGCAGAGAGAGAGAGAGCAGCGAGAGG
AGCAAGAACAACGAGGGCGAACAGGAGGAGGGGATCAAGACATCTCCAAC
TACCTCGAGATGGCAACGATTACAACAAAACCTTTGTCGCTTCAGCCTGA
CGAGGCGGCCACGCGAATACAGGCCTGGCGACGCGGGGTCTACTACCGAC
GAGTTGCTGGCGTAGCAGCGACCCAAGCCGCGCGGCGGGAGGAGACACCG
ACGATGACGACGGCGAAAGAGCCTCCCCGCCGCAATCAAGGCAGCAGCAA
GAGTGCGCACCTGCGGGCTGCTCTTGAAGCCCTGCAGGCGGCGCACTCCG
CTGTAGCTCTGTCGAAAAAGTCTACTTCCGACGACGAAAGAAGAAGGCAC
ACAAGCAGCCAGGATGTGATACGGAAAACCGCGGAGGAGAGAAACCCAAG
GCAAGTACGCACGCAATGGCATCAAAACCCCATGAATGTGGGTCGGAACG
GCACTAAAGACACAGCAGCCGCGCTTCTAGTGGATGGGCTGTCCTCACGC
AGTGAAAGCCCGCGTGTCGACGAGCTGAGGCGGTTGGAGGCGAGGGTGTC
GGAGAGGAGGAACACGCCTTGCTCGCCTGCAAGAGCGCGGCGAGCCAATC
CCTCCCGAGAGAGATGA back to top
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