mRNA_Ecto-sp13_S_contig9673.21304.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: D8LTI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI6_ECTSI) HSP 1 Score: 884 bits (2283), Expect = 0.000e+0 Identity = 525/637 (82.42%), Postives = 531/637 (83.36%), Query Frame = 1
Query: 1 QELAGVRKTTGSNVGGSLLVPTRAELKARTVAAGGDHQSTTPGLIPRIHERLLGEHNARGSSGXXXXXXXXXXXXXPTGVRERQTFMRGGGQGGFDMSVTSDLAGGGGRAA-AAKWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKRVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGPGALMGSETWIGATECATLLRQACNTYFALGSFGVKAEVIDFESSAPFAPAVAEEASSAQEEPEGGSKRKTPSSAPRSPLSLHPNGSTSFRAWPXXXXXXXXXXSYNGERVTQVSVAQGLVQQSIRSFLPSSSSPSSTPRDRGAVRSSTQPGGAISGIGGGLGGQHERRWRGAGPRLGNGSRGRGRGAAGRDGFLSDGGGRGXXXXXXXXXXXXXXXXXTWXXXXXXXXAHRKNGHIGKDAGDRMGKALAAWAWEYFCTPWGTAEGGSSSIGDGGKGAELQLPPSRPPSQLREPEGSSGGNACSXXXXXXXSRSRDTGGAWSGGTATDCRAEAWTRPPPPLYFQHDGHSRSIVGVLRPGGAGQRGGSSGDGRDXXXXXXXXXXXXXXXXXXXXXXXXGAGSRQAACLLVFDPSHAGGPIRDALDDTQKGRWGRFLKRGEHAL 1908
QEL GV KTTG ++GGS LVPTRAELKARTVAAGGD STTPGLIPRIHERLLGEHNARGS GVRERQTFMRG G+GGFDMSVTSD AGGG RAA AA+WRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKRVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGG GALMGSETWIGATECATLLR SFGVKAEVIDFESSAP APA A EASSAQEEPEGGSKRKTPSSAPRSPLSLHPNGSTS RAWP S NG R Q SVAQG VQQSIR FLPSSSSPSSTPRDR AV S TQPGGAI GIGGGLGGQHERRW GAG RLGNG RGRGRG AGRDGFLSDGGGR XXXXXXXXXXXX XXXXXXXXAHRKNG+IGKDAGDRMGKALAAWAWEYFCTPWGTAEG SSSIGDG KGAEL LPPSRPPSQLREP GS GGNACS XXXXX TATD RAEAWTRPPPPLYFQHDGHSRSIVGVL+PGGAGQRGG SG XXXXXXXXX XXXXXXXXXXXXX GAGSRQAACL VFDPSHAGGPIRDALDDTQ GRWGRFLKRG HAL
Sbjct: 7 QELEGVCKTTGGSIGGSSLVPTRAELKARTVAAGGDRLSTTPGLIPRIHERLLGEHNARGSGRGGGVRGNTTTGGGSLGVRERQTFMRGWGRGGFDMSVTSDFAGGGARAATAAEWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKRVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGLGALMGSETWIGATECATLLR----------SFGVKAEVIDFESSAPLAPAFAGEASSAQEEPEGGSKRKTPSSAPRSPLSLHPNGSTSSRAWPSGPSSLDAYPSSNGGRGVQASVAQGPVQQSIRPFLPSSSSPSSTPRDRSAVTSWTQPGGAIIGIGGGLGGQHERRWPGAGQRLGNGGRGRGRGVAGRDGFLSDGGGR------XXXXXXXXXXXXXXXXXXXXXXAHRKNGYIGKDAGDRMGKALAAWAWEYFCTPWGTAEGSSSSIGDGDKGAELLLPPSRPPSQLREPGGSGGGNACSGRXXXXXXXXXXXXXXXXXXTATDRRAEAWTRPPPPLYFQHDGHSRSIVGVLQPGGAGQRGGRSGXXXXXXXXXXXXXIXXXXXXXXXXXXXGGAGSRQAACLFVFDPSHAGGPIRDALDDTQNGRWGRFLKRGGHAL 627
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A6H5JIH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH7_9PHAE) HSP 1 Score: 251 bits (641), Expect = 1.000e-76 Identity = 124/157 (78.98%), Postives = 129/157 (82.17%), Query Frame = 1
Query: 1 QELAGVRKTTGSNVGGSLLVPTRAELKARTVAAGGDHQSTTPGLIPRIHERLLGEHNARGSSGXXXXXXXXXXXXXPTGVRERQTFMRGGGQGGFDMSVTSDLAGGGGRAAAAKWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKR 471
QEL GVRKTTGS++GGS LVPTRAEL+ARTVAAGGDHQSTTPGLIPRIHERLLGEHNARGS PTGVRERQTFMRGG +GG D SVTSD AG A+WRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKR
Sbjct: 7 QELEGVRKTTGSSIGGSSLVPTRAELEARTVAAGGDHQSTTPGLIPRIHERLLGEHNARGSGRGGGGRGNRAADGGPTGVRERQTFMRGGERGGCDSSVTSDFAGXXXXXXXAEWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKR 163
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A6H5JRP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP1_9PHAE) HSP 1 Score: 121 bits (304), Expect = 7.800e-29 Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 1
Query: 1315 MGKALAAWAWEYFCTPWGTAEGGSSSIGDGGKGAELQLPPSRPPSQLREPEGSSGGNAC 1491
MGKALAAWAWEYFCTPWGTAEGG SSIGDGGKGAEL LPPSRPPSQLREPEGSSGGNAC
Sbjct: 1 MGKALAAWAWEYFCTPWGTAEGGLSSIGDGGKGAELLLPPSRPPSQLREPEGSSGGNAC 59
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A6H5JJF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJF6_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.920e-28 Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = -1
Query: 877 MLSPQTTTDAADRASGLGRASHRAAVSGSRRGRGGRGQERPDALLYQPLSNGDLGDPLPVVGGICVER 1080
MLSPQTTTDAADRASGLGRASHRAAVSGSRRGR GRGQERPD LL++ LSNGDLGDP PV GGICVER
Sbjct: 1 MLSPQTTTDAADRASGLGRASHRAAVSGSRRGREGRGQERPDTLLHRLLSNGDLGDPPPVGGGICVER 68
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A7S1C6F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6F5_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.930e-27 Identity = 67/131 (51.15%), Postives = 83/131 (63.36%), Query Frame = 1
Query: 349 LCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKRVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGPGALMGSETWIGATECATLLRQACNTYFALGSFGVKAEVIDFESSAPFAPAVA 741
LC T +QRG G+GF+CGYRNIQMLCSAL+ P ++ LFGG IP V LQ WIERAW+ G+DP G AQLG +L+G+ WIG ECA LLR SFG+ AE++DF S ++ A A
Sbjct: 259 LCGPTT-FFSQRGVEGAGFACGYRNIQMLCSALVRHPPFRDALFGGLDTIPDVPSLQGWIERAWSLGFDPLGAAQLGH--SLVGTSKWIGTMECAALLR----------SFGIPAEIVDFAPSRAYSRATA 376
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A7S4DCM4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCM4_HETAK) HSP 1 Score: 113 bits (283), Expect = 1.220e-25 Identity = 60/117 (51.28%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 388 SHGSGFSCGYRNIQMLCSALMEWPEYKRVLF-------GGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGPGALMGSETWIGATECATLLRQACNTYFALGSFGVKAEVIDFESS 717
+ G +SCGYRNIQMLC AL+ PEY+RVLF G + PGV LQ W+ERAWA G+DP G A G G + G E WIGATE LLR SFGV+A+V+DF+ S
Sbjct: 7 AEGLQWSCGYRNIQMLCDALLRRPEYRRVLFEGAYARPGAAARAPGVRALQGWLERAWALGFDPAGAALFPG-GRVAGGEAWIGATEAVALLR----------SFGVRAQVVDFDES 112
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A4P1QX86_LUPAN (Uncharacterized protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1QX86_LUPAN) HSP 1 Score: 110 bits (275), Expect = 1.850e-22 Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 1
Query: 397 SGFSCGYRNIQMLCSALM-EWPEYKRVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGPGALMGSETWIGATECATLLRQACNTYFALGSFGVKAEVIDF 708
+G+ CG+RNIQMLCS L+ + PE + LFGGSG +P + LQ W+E AW G+DPDG AQ A+ GS+ WIG TECATLLR SF ++A V+DF
Sbjct: 141 AGWGCGWRNIQMLCSHLLVQRPEAREALFGGSGFVPDIPSLQRWLEIAWEKGFDPDGSAQF--DNAIYGSQKWIGTTECATLLR----------SFALRARVVDF 233
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A835YSB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSB8_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.910e-21 Identity = 69/177 (38.98%), Postives = 81/177 (45.76%), Query Frame = 1
Query: 334 AAKWRLCDQRTKHCTQRGSHGSG-FSCGYRNIQMLCSALMEWPEYKRVLFGGSGCI-----------------------------------PGVALLQCWIERAWADGYDPDG----------------CAQLGGPGALMGSETWIGATECATLLRQACNTYFALGSFGVKAEVIDF 708
A + LC+ T H TQ GS F+CGYRNIQM+C+ LM P Y+RVLFGG+G + PGVALLQ W ERAW G+D G CA G L G+ WIGATECA LLR FGV+AEV+DF
Sbjct: 274 AYAFALCELSTAHYTQCSDAGSRWFACGYRNIQMMCATLMTIPAYRRVLFGGTGVVSGAALLQVCTPQQKHLKFDSVIRALPSPLASPQVVPGVALLQAWTERAWEAGFDTAGQEQSIAACVSMTVWRMCAARVQVGPLQGTSKWIGATECAALLRY----------FGVRAEVVDF 440
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A1D1YG17_9ARAE (Zinc finger with UFM1-specific peptidase domain protein n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YG17_9ARAE) HSP 1 Score: 104 bits (259), Expect = 3.870e-20 Identity = 57/116 (49.14%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 388 SHGSGFSCGYRNIQMLCSALM-EWPEYKRVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGPGA------LMGSETWIGATECATLLRQACNTYFALGSFGVKAEVIDFES 714
S SG+ CG+RNIQMLCS LM E E K V+FGGSG +P + LQ W+E AW G+D GPGA + GS+ WIGATECATLLR SFG++A ++D +S
Sbjct: 141 SEDSGWGCGWRNIQMLCSHLMMERQEAKEVMFGGSGFVPDIPSLQRWLEIAWERGFD--------GPGAKSFNKRVYGSKKWIGATECATLLR----------SFGLRARIVDLDS 238
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Match: A0A2J8A6W4_9CHLO (Zinc finger with UFM1-specific peptidase domain protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A6W4_9CHLO) HSP 1 Score: 102 bits (255), Expect = 4.560e-20 Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 385 GSHGSGFSCGYRNIQMLCSALM-EWPEYKRVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGPGALMGSETWIGATECATLLRQACNTYFALGSFGVKAEVIDFE 711
G+ G+ CG+RNIQML SAL+ P+ + L+GG+G +P + +Q W+E AWA G+D G LGG ++ G WIG TE A LLR SFGVKA+++DFE
Sbjct: 145 GASDRGWGCGWRNIQMLSSALLLRSPQLREALYGGAGFVPDIGSMQAWLEAAWAGGFDLLGADSLGG--SIQGDRKWIGTTEAAALLR----------SFGVKAQIVDFE 242 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9673.21304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9673.21304.1 >prot_Ecto-sp13_S_contig9673.21304.1 ID=prot_Ecto-sp13_S_contig9673.21304.1|Name=mRNA_Ecto-sp13_S_contig9673.21304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=636bp QELAGVRKTTGSNVGGSLLVPTRAELKARTVAAGGDHQSTTPGLIPRIHEback to top mRNA from alignment at Ecto-sp13_S_contig9673:2..4199- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9673.21304.1 ID=mRNA_Ecto-sp13_S_contig9673.21304.1|Name=mRNA_Ecto-sp13_S_contig9673.21304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4198bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9673:2..4199- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9673:2..4199- >mRNA_Ecto-sp13_S_contig9673.21304.1 ID=mRNA_Ecto-sp13_S_contig9673.21304.1|Name=mRNA_Ecto-sp13_S_contig9673.21304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1908bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9673:2..4199- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |