mRNA_Ecto-sp13_S_contig9659.21288.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9659.21288.1
Unique NamemRNA_Ecto-sp13_S_contig9659.21288.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: D8LML3_ECTSI (Imidazole glycerol phosphate synthase hisHF n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML3_ECTSI)

HSP 1 Score: 518 bits (1335), Expect = 9.660e-181
Identity = 261/273 (95.60%), Postives = 264/273 (96.70%), Query Frame = 1
Query:    1 QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGK--TGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
            +TAVPHIGWNGLCV+KEHPFVD FDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGK   GGVS EG G+SSGGGGS RGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAE  L
Sbjct:  132 KTAVPHIGWNGLCVRKEHPFVDDFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKGKMGGVSAEGSGNSSGGGGSARGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEALL 404          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A835ZC23_9STRA (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC23_9STRA)

HSP 1 Score: 322 bits (825), Expect = 6.560e-104
Identity = 178/273 (65.20%), Postives = 205/273 (75.09%), Query Frame = 1
Query:    1 QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEP-PEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQ-EGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
            Q +VPHIGWNG    +    +D+ D D D VYFVHS+RA  T  N++WVLSTTTY    GEP    FIS+VQKGNV ACQFHPEKSG VGL+LL +FL   G  GG     +  + G    VR    T L KR+VACLDVR+ND GDLVVTKGDQY VRE  T  + KG VRNLGKPVELS RYY EGADE+ FLNITSFRQ VLDD PML+VLE ASE++FVPLTVGGGIR++TD +G+ YSA+EVA+RYFRAGADKISLGSDAVYAAE ++
Sbjct:  118 QVSVPHIGWNGAIQHRRSHVIDSLDKD-DVVYFVHSYRALPTAANKDWVLSTTTY----GEPGASEFISAVQKGNVVACQFHPEKSGGVGLKLLESFLKDRGVDGGSQAP-VPVAEG----VR----TVLRKRLVACLDVRTNDAGDLVVTKGDQYAVREEATDGQTKGVVRNLGKPVELSERYYREGADEITFLNITSFRQEVLDDAPMLQVLEKASEKIFVPLTVGGGIRAYTDGNGRHYSALEVAARYFRAGADKISLGSDAVYAAEAYM 376          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A7S1D2S3_CYCTE (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2S3_CYCTE)

HSP 1 Score: 306 bits (785), Expect = 7.570e-98
Identity = 166/273 (60.81%), Postives = 202/273 (73.99%), Query Frame = 1
Query:    7 AVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVRE---AGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTD-DSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
            AVPHIGWNG  + +E P +     D D VYFVHS+ A   P+N EWVL++TTY G      + F+SSVQ+G V A QFHPEKSG  GL  L  FL+S+        + +G ++    +V  N  T+LVKR+V  LDVR+ND GDLVVTKGDQYDVRE    G   G+G VRNLGKPV L+GRYY+EGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS+TD DSG TYSA+EVA+RYFRAGADK+S+GSDAV AAE +L
Sbjct:  132 AVPHIGWNGRTLHQESPVLSYVAPDDD-VYFVHSYYAPLIPQNSEWVLTSTTYEG------QRFVSSVQRGCVVAAQFHPEKSGVTGLNFLKGFLESI------ENDKLGTATHL--TVHTNVPTQLVKRVVVALDVRTNDDGDLVVTKGDQYDVRENEKEGVVTGRGGVRNLGKPVALAGRYYKEGADEIAFLNITSFRQGVIEDMPMLQVLEQASKSIFVPLTVGGGIRSYTDPDSGTTYSALEVAARYFRAGADKVSIGSDAVKAAEAYL 389          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: B8LDL7_THAPS (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDL7_THAPS)

HSP 1 Score: 304 bits (779), Expect = 6.000e-97
Identity = 164/277 (59.21%), Postives = 201/277 (72.56%), Query Frame = 1
Query:    1 QTAVPHIGWNGLCVKKEHPFVDAF--DTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVRE---AGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDD-SGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
            + +VPHIGWNG    +  P +     ++ G+ VYFVHS+ A  T EN EWVL+ TTY G      + FISSVQKGNV A QFHPEKSG  GL  +  FLDSV      + + +         V G++ T+LVKR+V  LDVRSND GDLVVTKGDQYDVRE    G QEG+G VRNLGKPV L+ RYY+EGADE+ FLNITSFR GV++D+PML+VLE AS+ +FVPLTVGGGIRS+ D  +GK YSA+EVASRYFRAGADK+S+GSD+V+AAE ++
Sbjct:  128 ERSVPHIGWNGALRHQSSPCMRYIHDNSHGEEVYFVHSYYAPLTAENSEWVLTRTTYEG------QEFISSVQKGNVVATQFHPEKSGVTGLNFIRGFLDSVADGTLSNTQPL--------EVDGSKHTELVKRVVVALDVRSNDHGDLVVTKGDQYDVRENEKEGVQEGRGGVRNLGKPVSLASRYYKEGADEIAFLNITSFRSGVIEDMPMLQVLEEASKEIFVPLTVGGGIRSYEDPGTGKVYSALEVASRYFRAGADKVSIGSDSVHAAEEYI 390          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A2D4BM05_PYTIN (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM05_PYTIN)

HSP 1 Score: 300 bits (769), Expect = 1.170e-95
Identity = 163/277 (58.84%), Postives = 197/277 (71.12%), Query Frame = 1
Query:    7 AVPHIGWNGLCVKKEH------PFVDAFDTDGDA---VYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVW 810
            AVPHIGWNGL V K+       P + A + D D    VYFVHSFRAT T +NE+WVL+TT YG         FISSVQ+GNV A QFHPEKSG VG+ ++  FL+++G         +GD             T+L KR++ACLDVR+ND+GDLVVTKGDQYDVRE       G VRN+GKPVEL  RYY EGADEV FLNI SFR+  ++D+PML+VLE +SERVFVPLTVGGGIR + DD  +T+SA++VASRYFRAGADK+S+GSDAVYAAE +
Sbjct:  113 AVPHIGWNGLKVWKKSALWAHLPQLQA-EADVDTTTKVYFVHSFRATRTAQNEDWVLTTTHYG------DYEFISSVQRGNVMATQFHPEKSGTVGIAIIKGFLENLGS--------MGDHDVAFADAASRPATQLSKRVIACLDVRTNDEGDLVVTKGDQYDVRETNDGGEGGHVRNMGKPVELCERYYAEGADEVAFLNICSFREQPIEDMPMLQVLEASSERVFVPLTVGGGIREYVDDQKRTFSALDVASRYFRAGADKVSIGSDAVYAAEAY 374          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A7S3XYZ3_HETAK (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYZ3_HETAK)

HSP 1 Score: 301 bits (771), Expect = 1.410e-95
Identity = 162/273 (59.34%), Postives = 194/273 (71.06%), Query Frame = 1
Query:    1 QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGT--QEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
            Q +VP IGWNG+   K+   V     + + VYFVHSFRA  T  N++WVL++TTYGG       ++IS+VQKGN+ A QFHPEKSG+ GL++  AFL   G+          D       V  +  T + KR++ACLDVRSND GDLVVTKGDQYDVRE G   Q GKG VRNLGKPV L  RYY++GADEV FLNITSFRQ V+ DLPML+VLE +SE VFVPLTVGGGIR + D  G  YSA++VASRYFRAGADK+S+GSDAVYAAE +L
Sbjct:  150 QCSVPSIGWNGVLKHKQSEIVAPIG-EHELVYFVHSFRALMTEANKDWVLTSTTYGG------SNYISAVQKGNILATQFHPEKSGQTGLKIFEAFLSRAGQL---------DPEPTPIEVPADATTAIAKRVIACLDVRSNDAGDLVVTKGDQYDVREEGDGDQGGKGQVRNLGKPVALCARYYQDGADEVTFLNITSFRQCVIGDLPMLQVLEKSSETVFVPLTVGGGIRDYEDGEGNKYSALDVASRYFRAGADKVSIGSDAVYAAEEYL 406          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A7S3DLQ0_9STRA (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DLQ0_9STRA)

HSP 1 Score: 300 bits (768), Expect = 2.220e-95
Identity = 161/272 (59.19%), Postives = 202/272 (74.26%), Query Frame = 1
Query:   10 VPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVRE---AGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDD-SGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
            VPHIGWNG  + +E P +     + +A YFVHS+ A  T EN+EW+L++TTY G A      +IS+VQ+G V A QFHPEKSG  GLR+L  FL+ V +      + +        +V  N +T LVKRIV  LDVR+ND GDLVVTKGDQYDVRE    G  EG+G VRNLGKPV L+ RYYEEGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS++D  SG+T+SA+EVASRYFRAGADK+S+GSDAV+A+E ++
Sbjct:  124 VPHIGWNGRILHQESPVLQHLSPEEEA-YFVHSYYAPITEENKEWILTSTTYSGQA------YISAVQRGAVVATQFHPEKSGSAGLRVLKGFLEGVEQGTLEKTKTL--------TVDPNAETMLVKRIVVALDVRTNDHGDLVVTKGDQYDVRENHKEGVVEGRGGVRNLGKPVSLASRYYEEGADEIAFLNITSFRQGVIEDMPMLQVLEEASKNIFVPLTVGGGIRSYSDPASGQTWSALEVASRYFRAGADKVSMGSDAVHASEAYI 380          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: B7FVQ7_PHATC (Imidazole glycerol phosphate synthase hisHF n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVQ7_PHATC)

HSP 1 Score: 300 bits (767), Expect = 2.460e-95
Identity = 160/273 (58.61%), Postives = 199/273 (72.89%), Query Frame = 1
Query:    7 AVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVRE---AGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDD-SGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
            AVPHIGWNG  V +E P +  +  D +  YFVHSF A    EN+EW+L+TTTYG       + F+S++Q+G+V A QFHPEKSG  GL++L  FL+            I +S           +TKL KR+V  LDVRSND GDLVVTKGDQYDVRE    G  EG+G VRNLGKPV L+ RYY+EGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS+T+  SG+T+SA+EVASRYFRAGADK+S+GSDAV+AAE ++
Sbjct:  123 AVPHIGWNGRIVHQESPVL-RYVADDEDTYFVHSFYAPVIEENKEWILTTTTYG------DQPFVSAIQRGSVVATQFHPEKSGSTGLKVLQGFLEVR----------IAESL----DADIKTETKLTKRVVVALDVRSNDHGDLVVTKGDQYDVRENHKEGVVEGRGGVRNLGKPVSLARRYYQEGADEIAFLNITSFRQGVIEDMPMLQVLEEASKNIFVPLTVGGGIRSYTEPISGRTWSALEVASRYFRAGADKVSMGSDAVHAAEAYV 374          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: K0SBJ6_THAOC (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBJ6_THAOC)

HSP 1 Score: 298 bits (764), Expect = 1.150e-94
Identity = 166/278 (59.71%), Postives = 202/278 (72.66%), Query Frame = 1
Query:    7 AVPHIGWNGLCVKKEHP---FVDAFDTD----GDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNED--TKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAG--TQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTD-DSGKTYSAVEVASRYFRAGADKISLGSDAVYAAE 804
            +VPHIGWNG+   ++ P   +V     +    G  VYFVHS+ A  T ENE+WVL+ TTY G      + ++SSVQ+GNV A QFHPEKSG  GL  +  FL+SV + G +S             +  N D  T+LVKR+V  LDVRSND GDLVVTKGDQYDVRE     + G+G VRNLGKPV+L+ RYYEEGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS+TD +SGK YSA+EVASRYFRAGADK+S+GSDAVYAAE
Sbjct:  130 SVPHIGWNGVVRLQDSPAMRYVSGASGESSGGGGEVYFVHSYYAPITSENEKWVLTRTTYEG------QEYVSSVQRGNVCATQFHPEKSGAAGLNFIRGFLESV-EDGTLSNTK---------PIPNNPDEHTQLVKRVVVALDVRSNDSGDLVVTKGDQYDVREKDEDAKTGRGGVRNLGKPVQLASRYYEEGADEIAFLNITSFRQGVIEDMPMLQVLEEASKCIFVPLTVGGGIRSYTDPESGKVYSALEVASRYFRAGADKVSIGSDAVYAAE 391          
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A662VSU9_9EURY (Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Archaeoglobales archaeon TaxID=2250258 RepID=A0A662VSU9_9EURY)

HSP 1 Score: 297 bits (761), Expect = 1.270e-94
Identity = 161/277 (58.12%), Postives = 197/277 (71.12%), Query Frame = 1
Query:    1 QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDS------VGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
            + +VPHIGWNG+ ++K        D  G+ VYFVHS+RA  + EN +W+LSTT YGG        FIS+VQKGNV A QFHPEKSG+ GLR+L  FL+S      + K+   S +G  D +        +E TKL KRIVACLDVR+ND+GDLVVTKGD+YDVRE      KG VRNLGKPVEL+ RY+EEGADE+ FLNIT FR   L D PML+VL L S+ VFVPLT+GGGI+ +TD  G  YSA++VAS YFR+GADK+S+GSDAVYAAE +L
Sbjct:  112 KVSVPHIGWNGIKIRKGSSLFS--DYSGEKVYFVHSYRAVPSKENSDWILSTTDYGG-------EFISAVQKGNVVAVQFHPEKSGEAGLRILKNFLESESLDLVLDKS--ASNKGKPDKAN-----EKSEKTKLAKRIVACLDVRTNDEGDLVVTKGDKYDVRE------KGRVRNLGKPVELARRYFEEGADEIVFLNITGFRDFPLKDQPMLEVLRLTSQNVFVPLTIGGGIQEYTDSDGMYYSALDVASEYFRSGADKVSIGSDAVYAAEKYL 366          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LML3_ECTSI9.660e-18195.60Imidazole glycerol phosphate synthase hisHF n=2 Ta... [more]
A0A835ZC23_9STRA6.560e-10465.20Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A7S1D2S3_CYCTE7.570e-9860.81Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
B8LDL7_THAPS6.000e-9759.21Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A2D4BM05_PYTIN1.170e-9558.84Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A7S3XYZ3_HETAK1.410e-9559.34Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A7S3DLQ0_9STRA2.220e-9559.19Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
B7FVQ7_PHATC2.460e-9558.61Imidazole glycerol phosphate synthase hisHF n=2 Ta... [more]
K0SBJ6_THAOC1.150e-9459.71Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A662VSU9_9EURY1.270e-9458.12Imidazole glycerol phosphate synthase subunit HisH... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9659contigEcto-sp13_S_contig9659:468..5470 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score520.8
Seed ortholog evalue3.9e-145
Seed eggNOG ortholog2880.D8LML3
Preferred nameHIS7
Model size813
KEGG rclassRC00010,RC00074,RC01190,RC01943
KEGG koko:K01493,ko:K01663
KEGG ReactionR01663,R04558
KEGG Pathwayko00240,ko00340,ko01100,ko01110,ko01230,map00240,map00340,map01100,map01110,map01230
KEGG ModuleM00026,M00429
Hectar predicted targeting categoryother localisation
GOsGO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0004359,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0016810,GO:0016811,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons7
EggNOG free text desc.imidazoleglycerol-phosphate synthase activity
EggNOG OGsCOG0107@1,KOG0623@2759
EC3.5.4.12
Cds size813
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02044
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9659.21288.1prot_Ecto-sp13_S_contig9659.21288.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9659 468..5470 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464229.929096-CDS-Ecto-sp13_S_contig9659:467..5661681464229.929096-CDS-Ecto-sp13_S_contig9659:467..566Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9659 468..566 -
1681464229.9500928-CDS-Ecto-sp13_S_contig9659:1133..12171681464229.9500928-CDS-Ecto-sp13_S_contig9659:1133..1217Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9659 1134..1217 -
1681464229.9620712-CDS-Ecto-sp13_S_contig9659:1536..16241681464229.9620712-CDS-Ecto-sp13_S_contig9659:1536..1624Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9659 1537..1624 -
1681464229.971628-CDS-Ecto-sp13_S_contig9659:2191..23141681464229.971628-CDS-Ecto-sp13_S_contig9659:2191..2314Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9659 2192..2314 -
1681464229.9814534-CDS-Ecto-sp13_S_contig9659:3002..31601681464229.9814534-CDS-Ecto-sp13_S_contig9659:3002..3160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9659 3003..3160 -
1681464229.990659-CDS-Ecto-sp13_S_contig9659:4564..47001681464229.990659-CDS-Ecto-sp13_S_contig9659:4564..4700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9659 4565..4700 -
1681464230.0001006-CDS-Ecto-sp13_S_contig9659:5345..54701681464230.0001006-CDS-Ecto-sp13_S_contig9659:5345..5470Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9659 5346..5470 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9659.21288.1

>prot_Ecto-sp13_S_contig9659.21288.1 ID=prot_Ecto-sp13_S_contig9659.21288.1|Name=mRNA_Ecto-sp13_S_contig9659.21288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp
QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVL
STTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSV
GKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVT
KGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQ
GVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYF
RAGADKISLGSDAVYAAEVWL
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mRNA from alignment at Ecto-sp13_S_contig9659:468..5470-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9659.21288.1 ID=mRNA_Ecto-sp13_S_contig9659.21288.1|Name=mRNA_Ecto-sp13_S_contig9659.21288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5003bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9659:468..5470- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACCGCTGTGCCCCACATCGGATGGAACGGCCTTTGCGTGAAGAAGGA GCACCCCTTCGTCGATGCCTTCGACACCGACGGGGACGCGGTCTACTTCG TGCACAGCTTCCGGGCGACTAGCACGTGAGGACCCCAAAGTATGGAGGGC GACGATGTTTTCGGTGGCTGTGTCTGCTGTAGGTGATGGTGTTGGTGTTG CTGCTCACATGTATTAGAAGTATCGTGTATTGGGGTTTGTTGTGTCCCGG TGCTAATATTTTCAGTCATCATCCGACTAATGTACCGCCACCATCCGACT GACATGATGCGGTAACATCACGTCATACGTTTTGGACATTTGTTTTTCGG AGAGCTTACAACTTGTCTCTGATGCTGATTTACTTGACCCCCAAATGCCA ATGTTTCAATTTATCTTGTCATGATATGAAAGCTGCGGTTTTCTTGGAGC AAGCTCTTTCTGAGTGCACGGCGGCCATCTCCCTCCCCTTCCCCAACGCA GCCCTTTTTTGTTGTCGTATACATCTTTACATCCTCTTCTATAGTGTTGA CCGGCACACCAACTGCACGATCGCCCGAGAATGCTACCAACACACGCCCG AACGTGTTCATCTTTCTCAGGGGGCACTTGCACGGACGTACATGGCACCA TTCGCTGCCGTCCAACAAAGCCCGGTCATAACCACACACCCCTGTTGCGA TGTCCTATTTCCCGGGCTGTGTTCATGCTGATCATTGCCTTCTGTTGTTG TTGTTGTTGTTTGTCGTCAGGCCCGAGAACGAGGAGTGGGTCTTGAGCAC GACAACGTACGGCGGAGGTGCGGGAGAGCCGCCGGAGCACTTCATCTCGT CCGTGCAGAAGGGGAACGTGACCGCCTGCCAGTTCCATCCGGAGAAGAGC GGAAAGGTGCTTGATTGATTGATCGATTGATTGATTTGTTCTTCGGTCGA GCACCGCATGAAGACGGAACGCGGCGAACCGCACACTAACGGCGATAATA AGATCTCGTGTGTGGCCTTCGTTTCTCCTGCGGAACACCCTGAGTGTGCC GTCCAAACCTGTGTCAAACCTCGTTCAGAATTGGTGGGAGGACAACAATC ACACAGTCAAAGGATTGCAGGGTTAGGTGTGCGTTATTTTTGTGTACCCC CTACCCGTGAAATGTTTTCGTGTCTGCCGCTCACAGTCAAGGGAGCAGAG AGGTACATGCCGTAATTATCGGAGAGTTGGCACCGGGTCCGATGATTTTT TTAAAACAAAATTCTCGGGTTTTTTATCGCACCCCGGTGCCATCTCTCCG ACCGGAGCCATCTCTCCGACCGGAGCCATCTCTCCGACCGGTGCCATCTC TCCGACCCCGACCCCGGAGCGGAAATGCAATTGAATCATGTCGTTTAGGA TTTTCAAGGCACCCCGGTGCGATCTTTCCGACCGGTGCGATCCCCGATGA AATACACACAGGTTTTGCACCCCGGTGCAATCTCTTCGACCGGTGCACAA TGCGATTGATCAGTATTGAACCACACCTACCTATAAGCACCGTTGTGGTT GGTTGAAGGCACACTGGTTACGGCAACGTAGGCTGGTACGTTACGGCTTT CCATGCAGTGGTCTTGTGTTTAATGCGAGTTTGGCTTTGGCGTGACAACA ACAAATGATGTCGTTTGCATCTAAGGTGGTACCAGCACACACGGTATCAA TGGTTTCCCGCTTTCGTTTATTCGGTCTTCTTTTACGGATTCCAGTACGT ACGTAGCAGTACCATGGTTTCGGGTTGTGTGAGGTGGGGTATGGTGCGGC TAGTACGTCGTGTGTTTGGTTGAGTGTACGGTTGGAAACTTCTATACCAA TAAAAAAATGAAGAACAACTGGCATCCCCGCGTGAACCGCGACCATCCAA TCGTACGTACAGGAGTGGCGCTCCGCTGACACCGTCCCCACGTGTAAAAG GTACGCACATGTACCTCGTTCCGGCAGCTGAAGAGGAGCTCAATCTTGGA TTTGGGGGTTGGAGAGATCGCACCCGATGCGATCTCACCGACCCCGGTGC GTAAATCGAATAAAATGTAATTTTCTCGGGTTTTTTATCGCACCCCGATG CCATTTCTCCGACCGGTGCCATCTCTCCGGCCGGTTCCAACTCTCCGACT AATACGGTACGTCATTGCGCGAGATGTTAGTGCCCGCCCTCGTCACGTTT ACTTCCGAACCCCTTTGCTTGCCAAGCTTTGCCTTCGACGTTTGTTGTCG TGTATCGGGATGCTTGCCATTGATCGCGAATCGGCCACCTATCCACCTTT TCTGGCACAGGTGGGTCTCCGTCTCCTGGGGGCGTTCCTGGACTCCGTGG GAAAGACAGGGGGCGTTTCGGGCGAGGGGATCGGGGACAGCAGCGGCGGT GGAGGAAGCGTCAGGGGGAACGAAGACACCAAGCTGGTCAAGAGAATCGT GGCGTGCTTGGATGTCAGGTACTGCTGTAAACTTCTTCTTGCTTGTGATG AGTGTTGAGAGTGTATTGGGGTTCGTTGTTGTAAATTCGGGACAGGCTCT AGATGAGGTCATCTTTTCCCCTACCCTTTGCAGAACGAGTGGCTTCTCGG GCAGATACTGGACCACAAGCAAACCACTGTAAGTGTCTACAGGGCAGAGA CAGACGAGGGAAGGCGATGGGAGGGAGGACGGGAGGGAGGGAGGAAGGAA GGACCGAAGTGCCTCGGTGTGGTCCCGAGTTGTGGCGTTCCTGGTACGTG AGACCGCGTGTCGTGGCTCGATTTCGCGGTTCCCCCAACAAGCTTGCACG GATAGGCAGTTGCTATCAGTGACTCGTGGTAATCTAGACATGATTTGTGC AAGATATAAAGGTACTAGTCATCCAGAAACCACCGCGCTTTCTAACGCTC TTATTATAGCCTCAAGCGAGAGAGTAGTTGTACAACATCAAGGCCACGTC TTCTTTTATTTGCACACTACACCCGCTGCGCCATCCTCGCTTTTGTTTTG TTGCGCTGCTCCGTTCACCTCGCTGTGGTTAAGTTTCGCACTTCTGCTGT TTGTTGTTTAAGGTAATACTGCAAGAGCTTTTATGCGGACAGTTTAATGG TACCGGTGCCCCTCTCTCCTCTCCGTGTGCACTTTCTGTTTCCGCCACGT TCTCAGGTCCAACGACCAAGGGGACCTCGTGGTGACCAAGGGAGACCAGT ACGACGTGAGGGAGGCGGGGACTCAAGAGGGGAAGGGGGACGTCAGGAAC CTCGGGAAACCCGTGGAACTTTCCGGGAGGTACGTACGGATACCATGGTT TTCTTTCAGATCCCGCATGTGCGCTTGCGACGTTGCCGGGGGTGCAGCCG GGTTTTGACCGCATCGCCCGAACTATGGGTTAACCTTTCCCACTCGCAGT GTGTTTGATTCGTTCGAGATTGTAAGTGTTTCCCACCGCCGAAAGCGCAA TTAACGGCCCGTTGGTATTAATGTCCGTGGTGCCATTTTTACTACAGGGG GGTAGACCGCGAACATATTGTGTGCTCCATATTGCGGACAGGGAAGGGAT GCGCTCTGTTTCGTATCGAGCACGGTGCCGTGCCATGCTATGTATGCTTC GCCTGTGACGATCGTTTATCCTCATGTGCAGGCGAAGGGACAAGCTTGGT GGGGGTGCTTCGTGTGGTACTTCGTGTCGGCTCTGTTGCTTGTATTGTGA ACCGTGGTGTAAAAGACCGTGGTGCGAAAAACCGTCGTGTGAAAGAACCG TGGCGTGAGCAACCGTTGTGTGTAAAACCGTCGTGTGAGCCGTGGTGCGA AAAAACGTCGTGTGAACAATGTTGGTGTGAACCGTGGTTGCCGCAGGTAC TACGAGGAGGGAGCCGATGAGGTTTGCTTCTTGAACATCACCTCCTTCAG GCAAGGGGTGCTCGACGACCTCCCCATGCTCAAGGTGCGGATGCGTTCAT TCGTGCCTGTGGATGTTCGGTTGCTCGTGCATGCATCGTTCTTGCATACC TCCCCATGTCGTGACCGTAATTGGTGTTCAAGCACAGATTTCCGCAAGAA CACGGTGTACGGTATTAGTTCACCACCGTTGGTCACGCAAAGCATGCGAA GGACGGTTTTCTGTTTTTAGTTCAGCGTTGGGAAAAGACCAAGCACCGCT TTTGCGCGCACCTTCATGTATTCTGCGCTTTCATCCTCCCGCTTTGGTAC AACACAACACGACATGTGAACAGCCAACTTCCTTCCTTTTGTTGTGTTTT TAGGTGCTGGAGCTCGCGTCCGAACGCGTGTTCGTCCCTCTCACCGTGGG AGGAGGCATCAGGAGCCACACCGACGACTCCGGGAAGGTGAGTCTGGGAG CCAGCCGTTCCACGGAACGGCTGCTGCCTGTCCCGTGGAATGATACCGGG GACCGGCAGCATGAGGACACATGAAGCTACGCTGCAGACCCGGTTCGGTT TTCACAGCAGTGGAGCATTAACTACTCGTCCTGTTTTTCGGCACTTGCGT ACGGGATTGACGGCTGGCGGTTGGAACAGTTGTCGGGGGGGCCCACGATA CAGAATGGGCGACTTGCTTTTCGGGGTCCGCGACACGTCGGTAGCAGCGC CGAAGTACACACCGCGGTGGCGGTTGTGTTTTTGGCGGGCTCTCTCTCTC TCTCAAGACTCGAACCTCTTTCGTTTACTGCGGAAGGGATTTGAGGACTT CTGTACCGTGATTCCTTGTTTTTCTCCCTCCCCATAACCGTTTTCCATGT GGTTGCCTCCCCCCACGACGTGTGCCCTAATTGTTCAATTCAGTGGTTCT GAAAGGTATCTATCCACGATTACCTTCTCCCTTTCGTTCGTTGTGGTGCG TTTGCGAACGTTCGTTTGTGTCTCTTTCGCTTGCACGTGGTGGTCGTATT CCAGACGTACAGTGCCGTCGAGGTGGCATCCCGATACTTCAGGGCCGGCG CCGACAAGATATCCCTGGGGTCGGATGCCGTTTACGCCGCGGAGGTGTGG CTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9659:468..5470-

>mRNA_Ecto-sp13_S_contig9659.21288.1 ID=mRNA_Ecto-sp13_S_contig9659.21288.1|Name=mRNA_Ecto-sp13_S_contig9659.21288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9659:468..5470- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACCGCTGTGCCCCACATCGGATGGAACGGCCTTTGCGTGAAGAAGGA
GCACCCCTTCGTCGATGCCTTCGACACCGACGGGGACGCGGTCTACTTCG
TGCACAGCTTCCGGGCGACTAGCACGCCCGAGAACGAGGAGTGGGTCTTG
AGCACGACAACGTACGGCGGAGGTGCGGGAGAGCCGCCGGAGCACTTCAT
CTCGTCCGTGCAGAAGGGGAACGTGACCGCCTGCCAGTTCCATCCGGAGA
AGAGCGGAAAGGTGGGTCTCCGTCTCCTGGGGGCGTTCCTGGACTCCGTG
GGAAAGACAGGGGGCGTTTCGGGCGAGGGGATCGGGGACAGCAGCGGCGG
TGGAGGAAGCGTCAGGGGGAACGAAGACACCAAGCTGGTCAAGAGAATCG
TGGCGTGCTTGGATGTCAGGTCCAACGACCAAGGGGACCTCGTGGTGACC
AAGGGAGACCAGTACGACGTGAGGGAGGCGGGGACTCAAGAGGGGAAGGG
GGACGTCAGGAACCTCGGGAAACCCGTGGAACTTTCCGGGAGGTACTACG
AGGAGGGAGCCGATGAGGTTTGCTTCTTGAACATCACCTCCTTCAGGCAA
GGGGTGCTCGACGACCTCCCCATGCTCAAGGTGCTGGAGCTCGCGTCCGA
ACGCGTGTTCGTCCCTCTCACCGTGGGAGGAGGCATCAGGAGCCACACCG
ACGACTCCGGGAAGACGTACAGTGCCGTCGAGGTGGCATCCCGATACTTC
AGGGCCGGCGCCGACAAGATATCCCTGGGGTCGGATGCCGTTTACGCCGC
GGAGGTGTGGCTG
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