mRNA_Ecto-sp13_S_contig9659.21288.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: D8LML3_ECTSI (Imidazole glycerol phosphate synthase hisHF n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML3_ECTSI) HSP 1 Score: 518 bits (1335), Expect = 9.660e-181 Identity = 261/273 (95.60%), Postives = 264/273 (96.70%), Query Frame = 1
Query: 1 QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGK--TGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
+TAVPHIGWNGLCV+KEHPFVD FDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGK GGVS EG G+SSGGGGS RGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAE L
Sbjct: 132 KTAVPHIGWNGLCVRKEHPFVDDFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKGKMGGVSAEGSGNSSGGGGSARGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEALL 404
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A835ZC23_9STRA (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC23_9STRA) HSP 1 Score: 322 bits (825), Expect = 6.560e-104 Identity = 178/273 (65.20%), Postives = 205/273 (75.09%), Query Frame = 1
Query: 1 QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEP-PEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQ-EGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
Q +VPHIGWNG + +D+ D D D VYFVHS+RA T N++WVLSTTTY GEP FIS+VQKGNV ACQFHPEKSG VGL+LL +FL G GG + + G VR T L KR+VACLDVR+ND GDLVVTKGDQY VRE T + KG VRNLGKPVELS RYY EGADE+ FLNITSFRQ VLDD PML+VLE ASE++FVPLTVGGGIR++TD +G+ YSA+EVA+RYFRAGADKISLGSDAVYAAE ++
Sbjct: 118 QVSVPHIGWNGAIQHRRSHVIDSLDKD-DVVYFVHSYRALPTAANKDWVLSTTTY----GEPGASEFISAVQKGNVVACQFHPEKSGGVGLKLLESFLKDRGVDGGSQAP-VPVAEG----VR----TVLRKRLVACLDVRTNDAGDLVVTKGDQYAVREEATDGQTKGVVRNLGKPVELSERYYREGADEITFLNITSFRQEVLDDAPMLQVLEKASEKIFVPLTVGGGIRAYTDGNGRHYSALEVAARYFRAGADKISLGSDAVYAAEAYM 376
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A7S1D2S3_CYCTE (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2S3_CYCTE) HSP 1 Score: 306 bits (785), Expect = 7.570e-98 Identity = 166/273 (60.81%), Postives = 202/273 (73.99%), Query Frame = 1
Query: 7 AVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVRE---AGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTD-DSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
AVPHIGWNG + +E P + D D VYFVHS+ A P+N EWVL++TTY G + F+SSVQ+G V A QFHPEKSG GL L FL+S+ + +G ++ +V N T+LVKR+V LDVR+ND GDLVVTKGDQYDVRE G G+G VRNLGKPV L+GRYY+EGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS+TD DSG TYSA+EVA+RYFRAGADK+S+GSDAV AAE +L
Sbjct: 132 AVPHIGWNGRTLHQESPVLSYVAPDDD-VYFVHSYYAPLIPQNSEWVLTSTTYEG------QRFVSSVQRGCVVAAQFHPEKSGVTGLNFLKGFLESI------ENDKLGTATHL--TVHTNVPTQLVKRVVVALDVRTNDDGDLVVTKGDQYDVRENEKEGVVTGRGGVRNLGKPVALAGRYYKEGADEIAFLNITSFRQGVIEDMPMLQVLEQASKSIFVPLTVGGGIRSYTDPDSGTTYSALEVAARYFRAGADKVSIGSDAVKAAEAYL 389
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: B8LDL7_THAPS (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDL7_THAPS) HSP 1 Score: 304 bits (779), Expect = 6.000e-97 Identity = 164/277 (59.21%), Postives = 201/277 (72.56%), Query Frame = 1
Query: 1 QTAVPHIGWNGLCVKKEHPFVDAF--DTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVRE---AGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDD-SGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
+ +VPHIGWNG + P + ++ G+ VYFVHS+ A T EN EWVL+ TTY G + FISSVQKGNV A QFHPEKSG GL + FLDSV + + + V G++ T+LVKR+V LDVRSND GDLVVTKGDQYDVRE G QEG+G VRNLGKPV L+ RYY+EGADE+ FLNITSFR GV++D+PML+VLE AS+ +FVPLTVGGGIRS+ D +GK YSA+EVASRYFRAGADK+S+GSD+V+AAE ++
Sbjct: 128 ERSVPHIGWNGALRHQSSPCMRYIHDNSHGEEVYFVHSYYAPLTAENSEWVLTRTTYEG------QEFISSVQKGNVVATQFHPEKSGVTGLNFIRGFLDSVADGTLSNTQPL--------EVDGSKHTELVKRVVVALDVRSNDHGDLVVTKGDQYDVRENEKEGVQEGRGGVRNLGKPVSLASRYYKEGADEIAFLNITSFRSGVIEDMPMLQVLEEASKEIFVPLTVGGGIRSYEDPGTGKVYSALEVASRYFRAGADKVSIGSDSVHAAEEYI 390
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A2D4BM05_PYTIN (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM05_PYTIN) HSP 1 Score: 300 bits (769), Expect = 1.170e-95 Identity = 163/277 (58.84%), Postives = 197/277 (71.12%), Query Frame = 1
Query: 7 AVPHIGWNGLCVKKEH------PFVDAFDTDGDA---VYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVW 810
AVPHIGWNGL V K+ P + A + D D VYFVHSFRAT T +NE+WVL+TT YG FISSVQ+GNV A QFHPEKSG VG+ ++ FL+++G +GD T+L KR++ACLDVR+ND+GDLVVTKGDQYDVRE G VRN+GKPVEL RYY EGADEV FLNI SFR+ ++D+PML+VLE +SERVFVPLTVGGGIR + DD +T+SA++VASRYFRAGADK+S+GSDAVYAAE +
Sbjct: 113 AVPHIGWNGLKVWKKSALWAHLPQLQA-EADVDTTTKVYFVHSFRATRTAQNEDWVLTTTHYG------DYEFISSVQRGNVMATQFHPEKSGTVGIAIIKGFLENLGS--------MGDHDVAFADAASRPATQLSKRVIACLDVRTNDEGDLVVTKGDQYDVRETNDGGEGGHVRNMGKPVELCERYYAEGADEVAFLNICSFREQPIEDMPMLQVLEASSERVFVPLTVGGGIREYVDDQKRTFSALDVASRYFRAGADKVSIGSDAVYAAEAY 374
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A7S3XYZ3_HETAK (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYZ3_HETAK) HSP 1 Score: 301 bits (771), Expect = 1.410e-95 Identity = 162/273 (59.34%), Postives = 194/273 (71.06%), Query Frame = 1
Query: 1 QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGT--QEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
Q +VP IGWNG+ K+ V + + VYFVHSFRA T N++WVL++TTYGG ++IS+VQKGN+ A QFHPEKSG+ GL++ AFL G+ D V + T + KR++ACLDVRSND GDLVVTKGDQYDVRE G Q GKG VRNLGKPV L RYY++GADEV FLNITSFRQ V+ DLPML+VLE +SE VFVPLTVGGGIR + D G YSA++VASRYFRAGADK+S+GSDAVYAAE +L
Sbjct: 150 QCSVPSIGWNGVLKHKQSEIVAPIG-EHELVYFVHSFRALMTEANKDWVLTSTTYGG------SNYISAVQKGNILATQFHPEKSGQTGLKIFEAFLSRAGQL---------DPEPTPIEVPADATTAIAKRVIACLDVRSNDAGDLVVTKGDQYDVREEGDGDQGGKGQVRNLGKPVALCARYYQDGADEVTFLNITSFRQCVIGDLPMLQVLEKSSETVFVPLTVGGGIRDYEDGEGNKYSALDVASRYFRAGADKVSIGSDAVYAAEEYL 406
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A7S3DLQ0_9STRA (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DLQ0_9STRA) HSP 1 Score: 300 bits (768), Expect = 2.220e-95 Identity = 161/272 (59.19%), Postives = 202/272 (74.26%), Query Frame = 1
Query: 10 VPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVRE---AGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDD-SGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
VPHIGWNG + +E P + + +A YFVHS+ A T EN+EW+L++TTY G A +IS+VQ+G V A QFHPEKSG GLR+L FL+ V + + + +V N +T LVKRIV LDVR+ND GDLVVTKGDQYDVRE G EG+G VRNLGKPV L+ RYYEEGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS++D SG+T+SA+EVASRYFRAGADK+S+GSDAV+A+E ++
Sbjct: 124 VPHIGWNGRILHQESPVLQHLSPEEEA-YFVHSYYAPITEENKEWILTSTTYSGQA------YISAVQRGAVVATQFHPEKSGSAGLRVLKGFLEGVEQGTLEKTKTL--------TVDPNAETMLVKRIVVALDVRTNDHGDLVVTKGDQYDVRENHKEGVVEGRGGVRNLGKPVSLASRYYEEGADEIAFLNITSFRQGVIEDMPMLQVLEEASKNIFVPLTVGGGIRSYSDPASGQTWSALEVASRYFRAGADKVSMGSDAVHASEAYI 380
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: B7FVQ7_PHATC (Imidazole glycerol phosphate synthase hisHF n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVQ7_PHATC) HSP 1 Score: 300 bits (767), Expect = 2.460e-95 Identity = 160/273 (58.61%), Postives = 199/273 (72.89%), Query Frame = 1
Query: 7 AVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVRE---AGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDD-SGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
AVPHIGWNG V +E P + + D + YFVHSF A EN+EW+L+TTTYG + F+S++Q+G+V A QFHPEKSG GL++L FL+ I +S +TKL KR+V LDVRSND GDLVVTKGDQYDVRE G EG+G VRNLGKPV L+ RYY+EGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS+T+ SG+T+SA+EVASRYFRAGADK+S+GSDAV+AAE ++
Sbjct: 123 AVPHIGWNGRIVHQESPVL-RYVADDEDTYFVHSFYAPVIEENKEWILTTTTYG------DQPFVSAIQRGSVVATQFHPEKSGSTGLKVLQGFLEVR----------IAESL----DADIKTETKLTKRVVVALDVRSNDHGDLVVTKGDQYDVRENHKEGVVEGRGGVRNLGKPVSLARRYYQEGADEIAFLNITSFRQGVIEDMPMLQVLEEASKNIFVPLTVGGGIRSYTEPISGRTWSALEVASRYFRAGADKVSMGSDAVHAAEAYV 374
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: K0SBJ6_THAOC (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBJ6_THAOC) HSP 1 Score: 298 bits (764), Expect = 1.150e-94 Identity = 166/278 (59.71%), Postives = 202/278 (72.66%), Query Frame = 1
Query: 7 AVPHIGWNGLCVKKEHP---FVDAFDTD----GDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKTGGVSGEGIGDSSGGGGSVRGNED--TKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAG--TQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTD-DSGKTYSAVEVASRYFRAGADKISLGSDAVYAAE 804
+VPHIGWNG+ ++ P +V + G VYFVHS+ A T ENE+WVL+ TTY G + ++SSVQ+GNV A QFHPEKSG GL + FL+SV + G +S + N D T+LVKR+V LDVRSND GDLVVTKGDQYDVRE + G+G VRNLGKPV+L+ RYYEEGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS+TD +SGK YSA+EVASRYFRAGADK+S+GSDAVYAAE
Sbjct: 130 SVPHIGWNGVVRLQDSPAMRYVSGASGESSGGGGEVYFVHSYYAPITSENEKWVLTRTTYEG------QEYVSSVQRGNVCATQFHPEKSGAAGLNFIRGFLESV-EDGTLSNTK---------PIPNNPDEHTQLVKRVVVALDVRSNDSGDLVVTKGDQYDVREKDEDAKTGRGGVRNLGKPVQLASRYYEEGADEIAFLNITSFRQGVIEDMPMLQVLEEASKCIFVPLTVGGGIRSYTDPESGKVYSALEVASRYFRAGADKVSIGSDAVYAAE 391
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Match: A0A662VSU9_9EURY (Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Archaeoglobales archaeon TaxID=2250258 RepID=A0A662VSU9_9EURY) HSP 1 Score: 297 bits (761), Expect = 1.270e-94 Identity = 161/277 (58.12%), Postives = 197/277 (71.12%), Query Frame = 1
Query: 1 QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDS------VGKTGGVSGEGIGDSSGGGGSVRGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGTQEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGKTYSAVEVASRYFRAGADKISLGSDAVYAAEVWL 813
+ +VPHIGWNG+ ++K D G+ VYFVHS+RA + EN +W+LSTT YGG FIS+VQKGNV A QFHPEKSG+ GLR+L FL+S + K+ S +G D + +E TKL KRIVACLDVR+ND+GDLVVTKGD+YDVRE KG VRNLGKPVEL+ RY+EEGADE+ FLNIT FR L D PML+VL L S+ VFVPLT+GGGI+ +TD G YSA++VAS YFR+GADK+S+GSDAVYAAE +L
Sbjct: 112 KVSVPHIGWNGIKIRKGSSLFS--DYSGEKVYFVHSYRAVPSKENSDWILSTTDYGG-------EFISAVQKGNVVAVQFHPEKSGEAGLRILKNFLESESLDLVLDKS--ASNKGKPDKAN-----EKSEKTKLAKRIVACLDVRTNDEGDLVVTKGDKYDVRE------KGRVRNLGKPVELARRYFEEGADEIVFLNITGFRDFPLKDQPMLEVLRLTSQNVFVPLTIGGGIQEYTDSDGMYYSALDVASEYFRSGADKVSIGSDAVYAAEKYL 366 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9659.21288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9659.21288.1 >prot_Ecto-sp13_S_contig9659.21288.1 ID=prot_Ecto-sp13_S_contig9659.21288.1|Name=mRNA_Ecto-sp13_S_contig9659.21288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp QTAVPHIGWNGLCVKKEHPFVDAFDTDGDAVYFVHSFRATSTPENEEWVLback to top mRNA from alignment at Ecto-sp13_S_contig9659:468..5470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9659.21288.1 ID=mRNA_Ecto-sp13_S_contig9659.21288.1|Name=mRNA_Ecto-sp13_S_contig9659.21288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5003bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9659:468..5470- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9659:468..5470- >mRNA_Ecto-sp13_S_contig9659.21288.1 ID=mRNA_Ecto-sp13_S_contig9659.21288.1|Name=mRNA_Ecto-sp13_S_contig9659.21288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9659:468..5470- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |