mRNA_Ecto-sp13_S_contig9652.21282.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: D8LIS9_ECTSI (Branched chain amino acid aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIS9_ECTSI) HSP 1 Score: 577 bits (1487), Expect = 5.040e-203 Identity = 277/289 (95.85%), Postives = 281/289 (97.23%), Query Frame = 1
Query: 7 NPAEETCMQGDKNTEEYVRPSTTTKLEVPEGGELLKDGTVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNSPRYVKFDQNLAPLLEECMPIYQLLRSKAITGFGKLGKVR 873
NPAEE Q DK++EEYVRPSTTTKLEVPEGGELLKDGTVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRD+VFREQ DSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNSPRYVKFDQNLAPLLEECMPIYQLLRSKAITGFGKLGKV+
Sbjct: 7 NPAEEASKQDDKDSEEYVRPSTTTKLEVPEGGELLKDGTVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDEVFREQ----DSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNSPRYVKFDQNLAPLLEECMPIYQLLRSKAITGFGKLGKVQ 291
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: A0A4Y7LAH3_PAPSO (Uncharacterized protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LAH3_PAPSO) HSP 1 Score: 202 bits (513), Expect = 2.680e-57 Identity = 108/238 (45.38%), Postives = 149/238 (62.61%), Query Frame = 1
Query: 130 INVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQ-MRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNSPRY-VKFDQNLAPLLEECMPIYQLLRSK 837
I+ W++PRSLST+LMYSF+QR D V DEPLYAHFLR + RPYRD+V + +DSDG+R ++E+ GP K + KH+ KQ + L + K ++ I IR P+++LPS++ + + E+G+ +L+ +YS + +G P +IDAE L+ +PE VLR + E GIP+ P L WEAGPKP DG WA WYK KSTCF Y +L LLEE +P Y +LR K
Sbjct: 10 IHSWSAPRSLSTSLMYSFSQRDDIEVLDEPLYAHFLRVTGAE---RPYRDEVLLK----MDSDGNRVVEEMIFGPGEKRYRFCKHIGKQRVPGLSSDLMKKGKHFILIRNPLNILPSFDKVVPPSFLELGLAELVSIYSELSDLGTVPPIIDAEDLQQDPEAVLRGLCEDLGIPFQPAVLKWEAGPKPVDGLWAPWWYKSVHKSTCFKAVKEYPTPLPPSLYDLLEESLPFYNMLRKK 240
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: A0A2E3YEV7_9BACT (Sulfotransferase family protein n=3 Tax=FCB group TaxID=1783270 RepID=A0A2E3YEV7_9BACT) HSP 1 Score: 193 bits (490), Expect = 2.850e-57 Identity = 99/242 (40.91%), Postives = 144/242 (59.50%), Query Frame = 1
Query: 124 VRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHA-NLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNS-PRYVKFDQNLAPLLEECMPIYQLLRSKAI 843
+RINVW+ PR++STALMYSFAQRPD V DEPLYAH+L +H + + P D+V Q D+DG+ +++V LGP + V+++K M + LDL FL K N+I R P+ MLPS+ + +L++ G L + + +GQEP V+D+ +P VLR++ E G+ + L W+AGP+ DG WA WY +ST F P+ F L PLL+EC P+Y+ L +A+
Sbjct: 5 LRINVWSGPRNISTALMYSFAQRPDTRVVDEPLYAHYL-SHTPAQQYHPAADEVLASQ----DNDGEAVVRDVILGPCDRQVLFLKQMTHHLVELDLGFLAKTMNVILTRDPVDMLPSYQQQVETPSLRDTGYPQHLELLEALHEIGQEPTVLDSRETLRDPPSVLRQLCERIGLTFDESMLQWDAGPRDEDGVWAPHWYASVHRSTGFQPYVPKKEPFPDALRPLLKECQPLYEQLARRAL 241
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: A0A2T7CCE8_9POAL (Uncharacterized protein n=11 Tax=PACMAD clade TaxID=147370 RepID=A0A2T7CCE8_9POAL) HSP 1 Score: 200 bits (508), Expect = 1.740e-56 Identity = 108/240 (45.00%), Postives = 153/240 (63.75%), Query Frame = 1
Query: 118 GTVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQ-MRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNSPRY-VKFDQNLAPLLEECMPIYQLLR 831
G V I+ W++PRSLST+LMYSFAQR D V DEPLYA+FLR D RPYR+ + + + L DG++ +KEV GP K Y KH++KQ + NL + K ++ I IR P+++LPS++ I + E+G+ +L+ +YS + +G+ P VIDA+ L+ PE VLR + E GIP+ P+ L WEAGPK +DG WA WY+ KST F NS +Y + F LLE+ +P Y +L+
Sbjct: 12 GPVVIHAWSAPRSLSTSLMYSFAQRDDMEVLDEPLYANFLRVTGLD---RPYREDLLSKMEQDL--DGNKVVKEVIFGPGEKTYRYCKHISKQHLPNLSSDLMKKGKHFILIRNPLNILPSFDKVIPPSFLELGIGELVSIYSELCGLGKPPPVIDADDLQREPEAVLRGLCEDLGIPFQPQMLKWEAGPKEFDGIWAPWWYRSVHKSTGFSNSRQYPLTFPSAYYDLLEQSLPFYNMLK 246
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: D7CRP4_TRURR (Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) TaxID=649638 RepID=D7CRP4_TRURR) HSP 1 Score: 190 bits (483), Expect = 3.220e-56 Identity = 100/243 (41.15%), Postives = 145/243 (59.67%), Query Frame = 1
Query: 124 VRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNI-HANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCF-DNSPRYVKFDQNLAPLLEECMPIYQLLRSKAIT 846
+R++VW+ PR++STALMYSF +R D V DEPLY H+LR P RD+V ++D+DG+R ++EV LG PVV K+MA + L+ +FL + N++ R P MLPS + L++ G+ + + + V GQEP+VIDA+ L +PEGVLR V G+P+ P L+W AGPKP DG WA WY +S+ F +P+ +L PLLE C P+Y+ L + A++
Sbjct: 5 LRLSVWSGPRNVSTALMYSFRERADTTVVDEPLYGHYLRVSGAP---HPGRDEVLA----SMDTDGERVVREVLLGDYAAPVVMFKNMAHHLVGLERAFLGELTNVLLTRDPYDMLPSLAQRLPEPTLRDTGLTEQVALLEFVLERGQEPVVIDAKALLQDPEGVLRAVCRRLGLPFDPAMLAWPAGPKPEDGVWARHWYANVHRSSTFAPYTPKADPLPAHLTPLLEVCAPLYERLAAYAVS 240
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: A0A4R1BR48_9ACTN (Sulfotransferase family protein n=2 Tax=Rubrobacter taiwanensis TaxID=185139 RepID=A0A4R1BR48_9ACTN) HSP 1 Score: 190 bits (482), Expect = 4.550e-56 Identity = 100/244 (40.98%), Postives = 142/244 (58.20%), Query Frame = 1
Query: 118 GTVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHA-NLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCF-DNSPRYVKFDQNLAPLLEECMPIYQLLRSKAI 843
G +++++W+ PR++STALMYSF QR D +V DEPLY H+L+ D RE +D DG+R ++EV LGP +PV + K+MA + LD SFL + N++ IR P MLPS I A +L++ G+ + + + + G EP+V+DA + +P GVLR G+P+ LSW +GPKP DG WA WY +ST F + P+ F + L PLLEEC P+Y L AI
Sbjct: 3 GCMKLSMWSGPRNVSTALMYSFRQRSDTLVVDEPLYGHYLKVTGADHPGA-------REVMEHMDCDGERVVREVMLGPCERPVHFFKNMAHHLAGLDRSFLREITNLLLIRDPREMLPSLANQIPAPSLRDTGLREQVEILEALLKRGAEPVVLDAREVLLDPAGVLRRACAKLGLPFEEAMLSWPSGPKPEDGIWAKHWYHNVHRSTTFGEYRPKTDPFPERLKPLLEECRPLYGQLHRYAI 239
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: A0A328E3F6_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E3F6_9ASTE) HSP 1 Score: 197 bits (500), Expect = 1.970e-55 Identity = 105/237 (44.30%), Postives = 148/237 (62.45%), Query Frame = 1
Query: 130 INVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQ-MRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNSPRY-VKFDQNLAPLLEECMPIYQLLRS 834
I+ W++PRSLST+LMYSFAQR D V DEPLYA+FL+ RPYRD V ++ DG++ +K++ GP K Y KHMAKQ + L + + ++ I IR PI +LPS++ ++ ++ E+G+ DL+ +YS + +G+ P VIDA LR +PE L + E GIP+ L WEAG KPYDG WA WY+ KSTCF +Y + F +L LLE+ +P+Y +LRS
Sbjct: 11 IHSWSAPRSLSTSLMYSFAQRDDTEVLDEPLYAYFLKVTGAK---RPYRDAVLSN----MECDGNKVVKDIIFGPGEKKFRYCKHMAKQHLPGLTDELMKRGKHFILIRNPIEILPSFDEHVPSSFLELGLGDLVSLYSELSRLGKPPPVIDAADLRTDPEATLHGLCEDLGIPFQSTMLKWEAGAKPYDGIWAPWWYESIHKSTCFTPPRKYPLPFPLSLYELLEQSLPLYNMLRS 240
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: A0A2E0ZEJ0_9CHLR (Sulfotransferase family protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZEJ0_9CHLR) HSP 1 Score: 188 bits (477), Expect = 2.570e-55 Identity = 96/243 (39.51%), Postives = 144/243 (59.26%), Query Frame = 1
Query: 121 TVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNI-HANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDN-SPRYVKFDQNLAPLLEECMPIYQLLRSKAI 843
T RI +W+ PR++STALMYSFAQR D V+DEPLYAH+L P E + P ++V +++DG++ ++++ LG KPV++ KHM + +LD F+ + N+I R P+ MLPS+ + L ++G L + ++++GQ P V+D++ NP GVL ++ + GIP+ LSW AG +P DG W+ WY +ST F P+ F Q L PLL EC P Y+ L + AI
Sbjct: 4 TTRICLWSGPRNISTALMYSFAQRADTAVFDEPLYAHYLSKTPARE-YHPGAEEVIA----TMENDGEKVVQDLILGDHGKPVLFFKHMTHHLNDLDWGFMRQTVNVILTRDPVEMLPSYAKQVAQPALHDVGYALHLELLDYLQSIGQTPPVLDSKQTLLNPRGVLAKLCQQIGIPFDEAMLSWPAGARPEDGSWSKFWYDAVHRSTGFQKYKPKTAPFPQQLRPLLAECQPYYEKLAALAI 241
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: A0A6G8QA12_9ACTN (Sulfotransferase family protein n=1 Tax=Rubrobacter tropicus TaxID=2653851 RepID=A0A6G8QA12_9ACTN) HSP 1 Score: 187 bits (476), Expect = 3.860e-55 Identity = 101/246 (41.06%), Postives = 139/246 (56.50%), Query Frame = 1
Query: 124 VRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRT----HPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNI-HANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDN-SPRYVKFDQNLAPLLEECMPIYQLLRSKAI 843
++++VW+ PR++STALMYSF QRPD +V DEPLY H+L+ HP DE E +D DGDR ++EV LGP V + K+MA + +LD FL N++ R P MLPS + + +++ G+L + + P+V+DA+ L +P GVLR V GIP+ E L W AGPKP DG WA WY ST F + P+ F Q L PLLEEC+P+Y+ L A+
Sbjct: 5 LKLSVWSGPRNVSTALMYSFRQRPDTLVVDEPLYGHYLKVTRADHPGDE-----------EVLAVMDQDGDRVVQEVILGPCEMSVHFFKNMAHHLTDLDRGFLNSTTNVLLTRDPAEMLPSLARQLPNPTMRDTGLLQQVEILDHALRHDDVPVVLDAKQLLLDPPGVLRRVCGRLGIPFYEEMLRWPAGPKPEDGVWAKHWYANVHASTGFSSYQPKSDAFPQRLVPLLEECIPLYERLSRYAV 239
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Match: A0A7C4VX92_9CHLR (Sulfotransferase family protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4VX92_9CHLR) HSP 1 Score: 187 bits (476), Expect = 4.220e-55 Identity = 102/243 (41.98%), Postives = 143/243 (58.85%), Query Frame = 1
Query: 121 TVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDQVFREQARALDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNI-HANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDN-SPRYVKFDQNLAPLLEECMPIYQLLRSKAI 843
T RI +W+ PR++STALMYSFAQR D V DEPLYAH+L T + T+ P +V Q ++DG + ++EV LG P +V+ KHM + NLD FL + N++ R P MLPS+ N+ L++ D L + +R+ GQ P V++A+ + NP GVL + + GIP+ LSW AGP+P DG WA WY +ST F+ P+ F ++L PLL EC P Y+ L + AI
Sbjct: 2 TKRICLWSGPRNISTALMYSFAQRADTTVVDEPLYAHYLST-TDAHTYHPGSAEVMAVQ----ENDGAKVVREVILGDYPTRLVFFKHMTHHLVNLDWDFLDQTINVLLTRDPRDMLPSYAKNVKQPTLRDTDYADHLKLLDYLRSRGQTPPVLEAKQVLLNPRGVLSRLCQQIGIPFDEAMLSWPAGPRPEDGVWAKHWYHSVHQSTGFEAYRPKASPFPEHLKPLLAECQPYYEQLAALAI 239 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9652.21282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9652.21282.1 >prot_Ecto-sp13_S_contig9652.21282.1 ID=prot_Ecto-sp13_S_contig9652.21282.1|Name=mRNA_Ecto-sp13_S_contig9652.21282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp MQGDKNTEEYVRPSTTTKLEVPEGGELLKDGTVRINVWASPRSLSTALMYback to top mRNA from alignment at Ecto-sp13_S_contig9652:1271..6111+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9652.21282.1 ID=mRNA_Ecto-sp13_S_contig9652.21282.1|Name=mRNA_Ecto-sp13_S_contig9652.21282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4841bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9652:1271..6111+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9652:1271..6111+ >mRNA_Ecto-sp13_S_contig9652.21282.1 ID=mRNA_Ecto-sp13_S_contig9652.21282.1|Name=mRNA_Ecto-sp13_S_contig9652.21282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=846bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9652:1271..6111+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |