mRNA_Ecto-sp13_S_contig9633.21258.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9633.21258.1
Unique NamemRNA_Ecto-sp13_S_contig9633.21258.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: D8LSH5_ECTSI (Ornithine aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSH5_ECTSI)

HSP 1 Score: 486 bits (1251), Expect = 3.590e-170
Identity = 242/263 (92.02%), Postives = 247/263 (93.92%), Query Frame = 1 
Query:    1 QNKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            +NKAHVVFAENNFWGRTLAAVSSSTDPESY GYGPYMPGFSTVP+NDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVH++CRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYG               GNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSL+APGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG
Sbjct:  168 ENKAHVVFAENNFWGRTLAAVSSSTDPESYNGYGPYMPGFSTVPYNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHEVCRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYG---------------GNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLNAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 415
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BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: A0A835Z9I4_9STRA (Ornithine aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9I4_9STRA)

HSP 1 Score: 347 bits (891), Expect = 3.130e-115
Identity = 168/261 (64.37%), Postives = 204/261 (78.16%), Query Frame = 1 
Query:    7 KAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            +A VVF   NFWGRTLAAVSSSTDP  Y+G+GPYMPGF  +P+ND+ AL   L ++ N  AFM+EPIQGEAGVVVPD GY+  V ++C  H VL+IADEVQTGLCR G  L CD +GV+PDIL+LGKALSGG YPVSAVL+  E+MLT+KPG+HGSTYG               GNPMACRVA AAL+VL++E MAENA  MG+RLR GLR+++AP VEL+RG+GLLNA+VVK++ G+  +AW +CL +KEKGLLAKPTHG
Sbjct:  193 EATVVFCAGNFWGRTLAAVSSSTDPTCYRGFGPYMPGFEIIPYNDIGALTTLLEADKNIAAFMLEPIQGEAGVVVPDKGYLQAVRELCTEHNVLMIADEVQTGLCRTGKQLCCDWEGVKPDILILGKALSGGTYPVSAVLSSHEVMLTIKPGEHGSTYG---------------GNPMACRVAMAALQVLKDENMAENATEMGQRLRDGLRAINAPVVELVRGKGLLNAIVVKEE-GESDRAWQICLKMKEKGLLAKPTHG 437
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BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: A0A8J8FJM7_9BACT (Ornithine aminotransferase n=1 Tax=Limnovirga soli TaxID=2656915 RepID=A0A8J8FJM7_9BACT)

HSP 1 Score: 344 bits (883), Expect = 8.410e-115
Identity = 169/263 (64.26%), Postives = 203/263 (77.19%), Query Frame = 1 
Query:    1 QNKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            +N+A V+FAE NFWGRT+AA+SSSTDP SYKG+GP+MPGF+ VP+ND+ ALEK L +NPN  AFMVEPIQGEAGVVVP DGY+A V  +C R+ VL IADE+QTGL R G  LACDH+GVRPDIL+LGKALSGGV PVSAVLADD+IML +KPG+HGSTYG               GNP+AC VA  AL+VL++E MAENA +MG  LR  L +L +P ++L+RGRGLLNA+V+     +   AWD CL LK+ GLLAKPTHG
Sbjct:  135 ENQATVIFAEGNFWGRTMAAISSSTDPSSYKGFGPFMPGFNLVPYNDLEALEKALTANPNVAAFMVEPIQGEAGVVVPHDGYLAGVRALCTRYNVLFIADEIQTGLARTGKMLACDHEGVRPDILILGKALSGGVLPVSAVLADDDIMLNIKPGEHGSTYG---------------GNPLACAVAMEALQVLKDEQMAENAEVMGAYLRNSLEALQSPYIQLVRGRGLLNAIVINHSNPEA--AWDYCLALKDNGLLAKPTHG 380
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BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: UPI00198280D7 (Ornithine--oxo-acid transaminase n=1 Tax=Fibrella sp. TaxID=1871320 RepID=UPI00198280D7)

HSP 1 Score: 339 bits (870), Expect = 6.670e-113
Identity = 166/263 (63.12%), Postives = 203/263 (77.19%), Query Frame = 1 
Query:    1 QNKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            +N+A +VFAE NFWGRTLAA+SSSTDP SY+G+GP++PGF  VP+ND+AALE    S+P   AFM+EPIQGEAGVV+PD+GY+  V ++C R+ VLLIADE+QTGLCR G  LACDH+ VRPDILVLGKALSGGV PVSAVLADD +ML +KPG+HGSTYG               GNP+AC VA  AL+VLR+E MAENA  MG+ LR GLRSLD+P ++ +RG+GLLNA+V+     +   AW++CL L E GLLAKPTHG
Sbjct:  132 ENQAKIVFAEGNFWGRTLAAISSSTDPSSYRGFGPFLPGFVLVPYNDLAALETAF-SDPTVAAFMIEPIQGEAGVVIPDEGYLRSVRELCDRYDVLLIADEIQTGLCRTGKMLACDHESVRPDILVLGKALSGGVLPVSAVLADDAVMLNIKPGEHGSTYG---------------GNPLACAVAMEALKVLRDEKMAENAAAMGDLLREGLRSLDSPRIDTVRGKGLLNAIVINHSHPNA--AWEICLRLMEHGLLAKPTHG 376
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BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: A0A0E9N0Z0_9BACT (Ornithine aminotransferase n=1 Tax=Flavihumibacter petaseus NBRC 106054 TaxID=1220578 RepID=A0A0E9N0Z0_9BACT)

HSP 1 Score: 337 bits (865), Expect = 4.620e-112
Identity = 165/263 (62.74%), Postives = 203/263 (77.19%), Query Frame = 1 
Query:    1 QNKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            +N+A ++FAENNFWGRT+AA+S+STDP SY  +GP++PGF T+P+ND+AALE  L  NP+  AFMVEPIQGEAGVV+PD GY+  V D+C ++ VL IADE+QTGLCR G  LACDH+GV+PDIL+LGKALSGGV PVSAVLA+DE+MLT+KPG+HGSTYG               GNP+AC+VA AALEVL+ E MAENA  MGE LR  L  L +P +  IRG+GLLNA+V+  D  D   AW +CL +KE+GLLAKPTHG
Sbjct:  137 ENRARIIFAENNFWGRTIAAISASTDPSSYGRFGPFVPGFDTIPYNDLAALETAL-QNPDVAAFMVEPIQGEAGVVLPDAGYLQGVRDLCTQYNVLFIADEIQTGLCRTGKMLACDHEGVKPDILILGKALSGGVLPVSAVLANDEVMLTIKPGEHGSTYG---------------GNPLACKVAMAALEVLKSEKMAENAAAMGEVLRNALAELRSPHIREIRGKGLLNAIVI--DHADKEAAWQLCLLMKEEGLLAKPTHG 381
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BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: UPI000479EF35 (ornithine--oxo-acid transaminase n=1 Tax=Asinibacterium sp. OR53 TaxID=925409 RepID=UPI000479EF35)

HSP 1 Score: 337 bits (865), Expect = 4.620e-112
Identity = 165/263 (62.74%), Postives = 200/263 (76.05%), Query Frame = 1 
Query:    1 QNKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            +N A ++FAE NFWGRTLAA+SSSTDP SYKG+GPYMPGF  +P+ND+ ALEK L  + N  AFMVEPIQGEAGVVVPDDGY+ KV ++C  + VL IADE+QTGL R G  LACDH+ VRPDIL+LGKALSGG+ PVSAVLADDE+ML + PG+HGSTYG               GNP+AC VA  AL+VL++E MAENA +MGE +R+ L  L +P +  IRG+GLLNA+V+  D  +   AW++CL LKEKGLLAKPTHG
Sbjct:  135 ENHAKIIFAEGNFWGRTLAAISSSTDPSSYKGFGPYMPGFEIIPYNDIIALEKAL-QDKNVAAFMVEPIQGEAGVVVPDDGYLQKVRELCSHYNVLFIADEIQTGLARTGKMLACDHENVRPDILILGKALSGGMLPVSAVLADDEVMLNILPGEHGSTYG---------------GNPLACAVAMEALKVLKDEQMAENAAVMGELMRSELAKLASPHIHTIRGKGLLNAIVI--DHANADAAWELCLTLKEKGLLAKPTHG 379
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BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: A0A851GTF4_9BACT (Ornithine aminotransferase n=1 Tax=Sediminibacterium sp. Gen4 TaxID=2736285 RepID=A0A851GTF4_9BACT)

HSP 1 Score: 337 bits (863), Expect = 8.710e-112
Identity = 165/263 (62.74%), Postives = 201/263 (76.43%), Query Frame = 1 
Query:    1 QNKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            +NKA ++FAE NFWGRTLAA+SSS DP SYKG+GPYMPGF  +P+ND  ALEK L  + N  AFMVEPIQGEAGVVVPD+GY++KV ++C  + VL IADE+QTGL R G  LACDH+ V+PDIL+LGKALSGGV PVSAVLA+DE+M+ +KPG+HGSTYG               GNP+AC VAT AL VL+EE MAENA  MG  LR+ L +L +P +  IRG+GLLNA+V+K    +   AWD+C++LKEKGLLAKPTHG
Sbjct:  135 ENKAKIIFAEGNFWGRTLAAISSSNDPSSYKGFGPYMPGFELIPYNDTIALEKAL-QDKNVAAFMVEPIQGEAGVVVPDEGYLSKVRELCSTYNVLFIADEIQTGLARTGKMLACDHENVKPDILILGKALSGGVLPVSAVLANDEVMMNIKPGEHGSTYG---------------GNPLACAVATTALTVLKEERMAENAEAMGSLLRSELAALQSPFIATIRGKGLLNAIVIKHHNPEA--AWDLCIELKEKGLLAKPTHG 379
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BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: UPI001FAD54D4 (ornithine aminotransferase, mitochondrial isoform X1 n=2 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAD54D4)

HSP 1 Score: 337 bits (865), Expect = 1.580e-111
Identity = 168/262 (64.12%), Postives = 201/262 (76.72%), Query Frame = 1 
Query:    4 NKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            NKA ++FAE NFWGRT+AA+SSSTDP SYKG+GPYMPGF  VPFND+ ALEK    +PN  AFMVEPIQGEAGVVVPD GY+ KV ++C ++ VL IADEVQTGL R G  LA DH+GVRPD+++LGKALSGGVYPVSAVL+D+E+MLT+KPG+HGSTYG               GNP+ACRVA AALEV+ EE +AENA  MGE LRA LR L    V  +RG+GLLNA+V+K+ +     AW +CL L++ GLLAKPTHG
Sbjct:  178 NKAKIIFAEGNFWGRTMAAISSSTDPSSYKGFGPYMPGFELVPFNDIPALEKTF-QDPNVAAFMVEPIQGEAGVVVPDQGYLTKVRELCTKYNVLWIADEVQTGLARTGRRLAVDHEGVRPDLVILGKALSGGVYPVSAVLSDNEVMLTIKPGEHGSTYG---------------GNPVACRVAIAALEVMEEEKLAENAQRMGELLRAELRKLPKDVVTTVRGKGLLNAIVIKETKD--YDAWKVCLRLRDNGLLAKPTHG 421
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: UPI001BDEC1C9 (ornithine--oxo-acid transaminase n=1 Tax=Flavihumibacter sp. IMCC34838 TaxID=2838156 RepID=UPI001BDEC1C9)

HSP 1 Score: 335 bits (858), Expect = 5.140e-111
Identity = 166/262 (63.36%), Postives = 202/262 (77.10%), Query Frame = 1 
Query:    4 NKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            NKA ++FAENNFWGRT+AA+SSSTDP SY  +GPYMPGF  VP+N++ ALEK L  +P+  AFMVEPIQGEAGVVVPD+GY+  V ++C ++ VL IADE+QTGL R G  LACDH+ VRPDIL+LGKALSGG  PVSAVLADDE+M+ +KPG+HGSTYG               GNP+ACRVA AALEVL+EE MAE+A  MG+ LR  L  L++P +  IRGRGLLNA+V+K +  +   AWD+CL LKE+GLLAKPTHG
Sbjct:  137 NKAKIIFAENNFWGRTMAAISSSTDPSSYSKFGPYMPGFELVPYNNLPALEKAL-QDPHVAAFMVEPIQGEAGVVVPDEGYLKGVRELCSQYNVLFIADEIQTGLARTGKMLACDHENVRPDILILGKALSGGTLPVSAVLADDEVMMNIKPGEHGSTYG---------------GNPLACRVAMAALEVLKEEKMAEHAEKMGQLLRDELAGLNSPYIATIRGRGLLNAIVIKHENPEA--AWDLCLKLKEEGLLAKPTHG 380
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Match: UPI001BDDFCD9 (ornithine--oxo-acid transaminase n=1 Tax=Flavihumibacter sp. IMCC34837 TaxID=2838157 RepID=UPI001BDDFCD9)

HSP 1 Score: 335 bits (858), Expect = 5.480e-111
Identity = 168/262 (64.12%), Postives = 202/262 (77.10%), Query Frame = 1 
Query:    4 NKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAALEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIADEVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLDLKEKGLLAKPTHG 789
            NKA V+FA+NNFWGRT+AA+SSSTDP SY  +GPYMPGF  VP+ND+ +LEK L  +PN  A+MVEPIQGEAGVVVPD+GY+  V ++C ++ VLLIADE+QTGL R G  LACDH+GVRPDIL+LGKALSGGV PVSAVLADD IML +KPG+HGSTYG               GNP+AC+VA AALEVL+EE MAE A  MG+  R  L  LD+P ++LIRG+GLLNA+V+     +   AWD+CL LKE+GLLAKPTHG
Sbjct:  138 NKAKVIFAQNNFWGRTMAAISSSTDPSSYHQFGPYMPGFEIVPYNDLVSLEKAL-QDPNVAAYMVEPIQGEAGVVVPDEGYLTAVRELCTQYNVLLIADEIQTGLARTGKMLACDHEGVRPDILILGKALSGGVLPVSAVLADDFIMLNIKPGEHGSTYG---------------GNPLACKVAMAALEVLKEENMAECAEEMGQLFRYELGKLDSPFIKLIRGKGLLNAIVINHPNPEA--AWDLCLLLKEEGLLAKPTHG 381
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9633.21258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSH5_ECTSI3.590e-17092.02Ornithine aminotransferase n=2 Tax=Ectocarpus TaxI... [more]
A0A835Z9I4_9STRA3.130e-11564.37Ornithine aminotransferase n=1 Tax=Tribonema minus... [more]
A0A8J8FJM7_9BACT8.410e-11564.26Ornithine aminotransferase n=1 Tax=Limnovirga soli... [more]
UPI00198280D76.670e-11363.12Ornithine--oxo-acid transaminase n=1 Tax=Fibrella ... [more]
A0A0E9N0Z0_9BACT4.620e-11262.74Ornithine aminotransferase n=1 Tax=Flavihumibacter... [more]
UPI000479EF354.620e-11262.74ornithine--oxo-acid transaminase n=1 Tax=Asinibact... [more]
A0A851GTF4_9BACT8.710e-11262.74Ornithine aminotransferase n=1 Tax=Sediminibacteri... [more]
UPI001FAD54D41.580e-11164.12ornithine aminotransferase, mitochondrial isoform ... [more]
UPI001BDEC1C95.140e-11163.36ornithine--oxo-acid transaminase n=1 Tax=Flavihumi... [more]
UPI001BDDFCD95.480e-11164.12ornithine--oxo-acid transaminase n=1 Tax=Flavihumi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9633contigEcto-sp13_S_contig9633:360..5366 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop0
Start0
Seed ortholog score339.3
Seed ortholog evalue1.6e-90
Seed eggNOG ortholog925409.KI911562_gene2618
Preferred namerocD
Model size789
KEGG rclassRC00006,RC00062
KEGG koko:K00819,ko:K00821
KEGG ReactionR00667,R02283,R04475
KEGG Pathwayko00220,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map00330,map01100,map01110,map01120,map01130,map01210,map01230
KEGG ModuleM00016,M00028,M00845
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606
Exons6
EggNOG free text desc.Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
EggNOG OGs1INU3@117747,4NE93@976,COG4992@1,COG4992@2
Ec32 ortholog descriptionornithine aminotransferase
Ec32 orthologEc-21_003730.1
EC2.6.1.11,2.6.1.13,2.6.1.17
Cds size789
COG Functional cat.E
BiGG ReactioniYO844.BSU40340
Best tax levelSphingobacteriia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9633.21258.1prot_Ecto-sp13_S_contig9633.21258.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9633 360..5366 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464227.9082162-CDS-Ecto-sp13_S_contig9633:359..4851681464227.9082162-CDS-Ecto-sp13_S_contig9633:359..485Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9633 360..485 +
1681464227.9203005-CDS-Ecto-sp13_S_contig9633:1072..12011681464227.9203005-CDS-Ecto-sp13_S_contig9633:1072..1201Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9633 1073..1201 +
1681464227.929727-CDS-Ecto-sp13_S_contig9633:2043..21631681464227.929727-CDS-Ecto-sp13_S_contig9633:2043..2163Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9633 2044..2163 +
1681464227.9390361-CDS-Ecto-sp13_S_contig9633:3432..35421681464227.9390361-CDS-Ecto-sp13_S_contig9633:3432..3542Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9633 3433..3542 +
1681464227.948042-CDS-Ecto-sp13_S_contig9633:3881..41011681464227.948042-CDS-Ecto-sp13_S_contig9633:3881..4101Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9633 3882..4101 +
1681464227.9569573-CDS-Ecto-sp13_S_contig9633:5282..53661681464227.9569573-CDS-Ecto-sp13_S_contig9633:5282..5366Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9633 5283..5366 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9633.21258.1

>prot_Ecto-sp13_S_contig9633.21258.1 ID=prot_Ecto-sp13_S_contig9633.21258.1|Name=mRNA_Ecto-sp13_S_contig9633.21258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp
QNKAHVVFAENNFWGRTLAAVSSSTDPESYKGYGPYMPGFSTVPFNDVAA
LEKRLASNPNTVAFMVEPIQGEAGVVVPDDGYMAKVHDICRRHKVLLIAD
EVQTGLCRAGTDLACDHDGVRPDILVLGKALSGGVYPVSAVLADDEIMLT
VKPGQHGSTYGKNGHAMPKKPCAFPGGNPMACRVATAALEVLREEGMAEN
ACLMGERLRAGLRSLDAPGVELIRGRGLLNAVVVKDDRGDGTKAWDMCLD
LKEKGLLAKPTHG
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mRNA from alignment at Ecto-sp13_S_contig9633:360..5366+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9633.21258.1 ID=mRNA_Ecto-sp13_S_contig9633.21258.1|Name=mRNA_Ecto-sp13_S_contig9633.21258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5007bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9633:360..5366+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAACAAGGCTCACGTGGTGTTCGCGGAGAACAATTTCTGGGGAAGAAC
TCTAGCGGCGGTGAGCTCGTCCACCGACCCGGAAAGCTACAAGGGCTACG
GGCCGTACATGCCCGGGTTTTCGACGGTAAGCCTGACGGCGGGCGGGGTG
GAGTGGAAGGGAGGCGCTTTATAAGCCGAATCCAACGATTAGACTAGACT
AGTCAGCGCTGATGGTTTGATTTCGGCTTCTAAAGGGTGTACTAGTGTTT
CGCATGCCTCGGCGGTTGGATCCTTGACCACGCGTCCTCGAGAAGACAGA
ACATTGTTCCAGCAGGACCGATGGCCATTCCTTCCTTCCTACTTTGCTAA
CAATGTTCTCCCTAGCTCACCTTTCTATCCGATCGGTATCACTCCCCGGC
CGGGGAAGGGGGAGAAAAATAGGGATTCTTTTTCCGGTGTGTGCTGCTCT
GCGTCGGTTGGTATTTCACCGTGGAAGACGCATCATACATTGCCCAGACG
GAAGATCGTCAGCTCTCACACCCGTTAGGTATACTCCGATAGCTGTGTTC
GTTGCATCTTATGGGAGGGTCCCAAGAGTACTCTTTCTGCTGTTCATGTT
TAGTTCTTGCTGAACAAAACAAGTTCATCAGATAAAGAGGCAAGATAGCG
ATGCAATATCATGGTGCTGTTTATTGTCCCGTCCTGCTTGTGTGTGTGTT
TTAATTGATTCAGGTGCCATTTAACGACGTGGCGGCGCTGGAAAAGCGTC
TTGCTAGCAACCCCAACACGGTGGCCTTCATGGTGGAGCCTATCCAGGGG
GAGGCCGGCGTCGTGGTCCCGGACGACGGTTACATGGCCAAGGTTGAACA
ACAAAGTGCACCGCATTGTTGAATAGTTACGCCGCCCATTGATGGATCGA
TATACCACCCAATCAGGGAGAGGTTGCCGTCGTGATCCCGGACGGCGGTC
ACACGGGCAAGTTTTAGAATTGATTGCACCGCTTCTCTTTTATTTATTCC
ACCGCTTGTTGATCTTTTGATCGCGCGGCTCTTGGAACGTTTTGTGCGAT
TAGCGCCGCGCTTTTTTTACTATTTCCGCCGCTCGTTGATGAGGGGACAT
TGCACCGCTCTTTGGATATATTGTACGATTAGCGCCGCTGGGAGATTATT
ATGTATTTTTGAGACTGGCGAGAACCCACCCACATCTGGTGCGAGGACAG
CGCTCCTATTCGCCCGTTGGGCCTGATCTACTCAGCACCTCAGTAACCCC
TCCCACGCGCGCGCCCTGTACGCCTCTCTTGACCCTGCCTGGGTTCGCGT
GGTAGTGAGCGGGGCTGGGGCGGGAGTACGGGTGGGGTGGCTGACCTATT
CATTTATACCGTATCTACCAACAACAGGGACGGCAGATGGGCGGAGCACA
AGCTGCGGAAGGGGATGCGTTGCTAGCGTGTTGGGTCCATACCCCCCTAT
TTCCCTGACTCACGCCATGTACCCCTATTGTCGTTGCCCCTTTCTACTAC
TACTGCTACGACTCCTGCAAGTACTACTACTATTCCCAGTTCAACTGAAT
CTCGTGCGGTACTCATGTGTGAACGCATCCCTTTGCTCCAGCAGGTGCGC
GGCGTTTATTCCCGCGCCGTCACGCTGTGTCAGTCGTATTTTCAACGTGT
CGAAACTAATGCCCACGTACATACCCGCCCGCAGGTGCACGATATCTGCC
GGCGACACAAGGTGCTGCTGATCGCCGACGAGGTTCAGACGGGGCTGTGC
CGGGCGGGCACCGACCTCGCGTGCGACCACGACGGCGTCAGGCCTGACAT
TCTGGTGGGGTTTCGGCGATTCTTCGGTGCTTTGCTGAGTGTGTTGTGTA
GCCACGTAGCCCCCCCCCCTTCATCCGCCCCGGCTTTGTAGGCATGCGTT
TGCGTGAGTATACCGCCCCCGCCCCCCCCACGCCCGCCCACCCCCCGTTG
CCCCTCCGTCCCGCCCAACCGGGGGTTCTTGGAGTGGTATGCACAAAATG
TGGGTGACACAAGATGTGACACACCCTGGGCCGATTTTCATAGCTCAACT
ACAGTACTCCACAGAAGAGATGGCGGCGTTGGGACCGTCTCTTTGAGAGA
CCTTGCCGAAAACGTACCGTTTGGTTTTGGCATCCTCTTCGTCATGGAGA
GTGGTCGAGCTTTGAAAATCGGTCCAGGGGGCGTGGTATCTTGTGTGTCG
TGCCAACCACGGTAGGTCAGTCACCCTTGGTGGGGAGAGGAAGTGGAAGA
CGTATATGATTCAAGCGGGCCCCGCGCGTCATCCTTCGTTTTTTTTTTCG
TCTTGACTTCAAATCAGCGCTCACAGCACTTGTACCGTTTACTCCAACCT
GTGGCCACACAAAAGGGTTTCCCGCTACCCACCCCTCCTGCAGTACCTTT
GTGTAAGAAAAATAAGGACTGAGAGTTATGCCGCCCCAAGTCCCCCACCC
ACGACCCCCCCCCCCCCCCCCCCCCCCACCAGTTCCGCACGCCCCCCCCC
CCCGCCCCCTTCTACCGCTGCCCAGTTTTTTTGTTTGGTGGTTTATNNNN
NNNNNNTTCCTTTGTTTAAAAAAAATTTTGGTTGTTTTTTTTTTCTCCCC
CAGCCCCCCCCCCCCCCCCCCCCCCCCCCCTGCCCGGACGATGATGCCGC
AAGTACCCCCCTGTCTGGATTTTGATGCGGTCGAGTTTTGATTGTTTCGC
GGATAACTTGGTGGCATCCTGGTGCACGAACACCCCGTGTGTGTGTGCTC
GATGTCCACCCCGGCATTCGGTGGTGGTGCAAGGGGTTTGGTCTGTTGAG
TAGGTGGAACCTGCGTCCGTACTCGTGGTATCGGGGATCCCCCGCCCGCC
CACCTCTGATAATCTTGTGTGTACCATTGTACAGTACGGTAGGAATAGCC
TGCTGGTGTGATGCGATGATGTTGATGTACTGAGTAGGGAGGGCAGACCT
TTTTCTTTTGTTTTCGGGTCGTGATCCACAAATTTAACGTAAAAAATCGA
GACTTCAAATCATAACAACAACAACAACAACAACAACAAGTTCGACGACG
ACTACGACGACTTTGGCGTACAGGTGCTGGGCAAGGCTCTGAGCGGAGGG
GTGTACCCGGTGTCGGCGGTCCTTGCGGACGACGAGATCATGCTCACCGT
CAAGCCCGGCCAGCACGGCTCCACCTACGGCAAGTTAGCACCAGTGTATC
CCTCAGTCCCTTGTCTGTGGGTACTCTGTACCCTACTTTTGCCCGAAACG
GTACTGCAGTAGTATGCATGGACATCAGCGTGTACTGTACCCTCTTTTGG
CCGCAGCCCTCAACTTCGGGTACGGCGAGCAGAGCAGGCTGCTGGTTCTC
GTTAGGTACAGAGACGAGTAGAAACAGCGACCTGGGGGGCATCATTATTG
GTGTCACCTACGTACACACACCGTAAACCCTTCCGTGTGCCATATGTTCG
GCGGGGTGTGATTTTTTTATGTCGTCACCTACGTTCGGACGGCAGCAACC
TTACACGTCTGTAACCGTTCAGGAACGGACATGCTATGCCTAAAAAACCC
TGCGCATTTCCAGGCGGAAACCCGATGGCTTGCCGCGTGGCGACGGCGGC
CCTGGAGGTGCTGCGAGAGGAGGGCATGGCCGAGAACGCCTGCCTCATGG
GCGAGAGGCTTCGCGCCGGCCTCCGATCACTGGACGCGCCGGGCGTGGAG
CTGATCAGGGGCCGCGGCCTCCTCAACGCCGTCGTCGTAAAGGTAAGGGG
AGGGGGGGCGTACTCATGTTTTGCATGCCTTAGCGGTTAGACCACGCGTC
CTCGAGAAGATGGAACATTGTCCCCATTGCAGGACCGATGGCCAATCGGG
AGAGGGGCGTACTCATGTTTTGCATGCCTTAGCGGTCAGACCGCACATCC
TCGAGGGGTTTCGGGGGGGCGTGGGGACTGGGTTAAGTAAGTAGCCACCG
TCATCTGTGGGTATGACCGTGGTGTGTGTATGCATAGGAGTTTGGGAGGC
AGGCGTTGGAGTGGGAGGGAGGAGAAGAGGCGGTCTGTCAGGCAAGGGGA
CAACAGACGCGCCGAAATAAGATGGGATGCTTGGTAGGAGTCCTTCTTGT
GACCATCGGCGCAAAGCTGAAGTGGAGGAGTCGTTCTCTAAACATAATTG
TATTATTGTTACGGAAGACCCGATTCGCAGGGTATCCATCGACAGACTTG
TACCAGACTCGGTCCACCTTCGCAATTTTGCCGCAAACCTCATGTGGTTG
TTCTCCTTACTGTTGTTGGGCCATCGCCGAAAGAACAACCTCCCATCCTT
TGCCCTCTGATGCCTTTTTGCTTACGCGTGCGCTGTCGGTGGGGCGAGTG
ATGGCGACAACCGCCACATTAGCCCCCCGCAACCTCGTTATCGTTTTCGT
CACCCACACCGTGTCCCGCCCATCTTCACGGGAGCATCATCATTTTCTTT
TGCTCGTCGACGATTTTACCCTCTCAATTTCTGCGGACATTGCTGTCCAG
GCCATCCGTGCTCACCACAGCAGCACCCCCTTCTTTTATTCTCTCCTTCG
CTGTGCGCGTTGCTAGGCCATCCATGCTCACGGCAGCAGCAGCCCTTTAT
TGGTCCTCGGCGGTCTCCTTTTGTCTCCCTCGTTGCGGGCGGTTGATTTC
TAGTCAATCCATCCTCCGGGCAGCCGCAACCCCTTTACTCTTCGGCTTTT
GCTTTCTTCCTCTCTGCGTGCATTGATTGCTAGTCCATCTTTGCTCACCG
CAGCAGCACCCCTGTTTAGCTCCTCTTTGTTTCTCTCTCCCTCTCTTTCT
CAATCTCTCTCTAACTCTCTGCGTGTATTTATTGCTACTGATGTGTTATT
TCTATTGCAAGACTCTCCTCTCTGCGTGCGTTGATTGCTATATATGATGC
ATTGCTATGTATTGCCATGATAGGACGACCGAGGTGATGGGACGAAGGCG
TGGGACATGTGCCTCGACCTCAAGGAGAAGGGGCTGTTGGCCAAGCCGAC
CCATGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9633:360..5366+

>mRNA_Ecto-sp13_S_contig9633.21258.1 ID=mRNA_Ecto-sp13_S_contig9633.21258.1|Name=mRNA_Ecto-sp13_S_contig9633.21258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9633:360..5366+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAACAAGGCTCACGTGGTGTTCGCGGAGAACAATTTCTGGGGAAGAAC
TCTAGCGGCGGTGAGCTCGTCCACCGACCCGGAAAGCTACAAGGGCTACG
GGCCGTACATGCCCGGGTTTTCGACGGTGCCATTTAACGACGTGGCGGCG
CTGGAAAAGCGTCTTGCTAGCAACCCCAACACGGTGGCCTTCATGGTGGA
GCCTATCCAGGGGGAGGCCGGCGTCGTGGTCCCGGACGACGGTTACATGG
CCAAGGTGCACGATATCTGCCGGCGACACAAGGTGCTGCTGATCGCCGAC
GAGGTTCAGACGGGGCTGTGCCGGGCGGGCACCGACCTCGCGTGCGACCA
CGACGGCGTCAGGCCTGACATTCTGGTGCTGGGCAAGGCTCTGAGCGGAG
GGGTGTACCCGGTGTCGGCGGTCCTTGCGGACGACGAGATCATGCTCACC
GTCAAGCCCGGCCAGCACGGCTCCACCTACGGCAAGAACGGACATGCTAT
GCCTAAAAAACCCTGCGCATTTCCAGGCGGAAACCCGATGGCTTGCCGCG
TGGCGACGGCGGCCCTGGAGGTGCTGCGAGAGGAGGGCATGGCCGAGAAC
GCCTGCCTCATGGGCGAGAGGCTTCGCGCCGGCCTCCGATCACTGGACGC
GCCGGGCGTGGAGCTGATCAGGGGCCGCGGCCTCCTCAACGCCGTCGTCG
TAAAGGACGACCGAGGTGATGGGACGAAGGCGTGGGACATGTGCCTCGAC
CTCAAGGAGAAGGGGCTGTTGGCCAAGCCGACCCATGGT
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