mRNA_Ecto-sp13_S_contig96.21214.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: D7FR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR26_ECTSI) HSP 1 Score: 591 bits (1523), Expect = 2.440e-200 Identity = 366/562 (65.12%), Postives = 374/562 (66.55%), Query Frame = 1
Query: 484 VGINVLKKGGGVVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLALEEIHRRLLENLAKAAGGGGDGAAGSLSSLGWGWEDLKRWASDGRGGSRGGGDXXXXXXXXX--RGFHLGSFGRFFGESLNVDVPPGSVLVALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAVGG-WSVGQDAFASQGVCPICLDAFSEAADGSGADTKGLVGADGMAAATLPDCGHTFCQRRVARPLMMEDRACLSRWTGDGSGSSGGNPQACPCPICDAPTPVVGDPRLGRTSRRRRALRPGPLRPRRXXXXXXXXDDGFFGFRWPGSSSSWGEGRSCGGRGGVNLRFSPSPRSSGWTSDKPRGLLPSPIAPXXXXXXXXXXXXXXXXXIRPPGASGSPGVSRTGRLGQTGGEQARERARREAAFQLASLGSQYPKFLDDRTVNRWLSKDYSSSWSRDPMLALNRPPDTGSENSRVAGGGARKGSGWVTNGSRGFGGGEXXXXXXXXXXXXXXGGW 2160
VGINVL+KGGGVVGGDEEVTAEGFARGVQD WRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAV+LALEEIH RL+ NLAKAAGG LSSLGWGWEDLKRWASDG GGS XXXXXXXXX RGFHLG F FF ES NVDVPPGSVL+ALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSA GG W VGQDA AS+GVCPICLDAFSEAADGSGADTKGLVGADGM AATLPDCGHTFCQR P GAS +PGVSRTGRLG+TGGEQARERARREAAFQLASLGSQYPKFLDDRTVNRWLSKDYSSSWSRDPMLALNRP DTGS+N RV GGGARKGSGWVTNGSRG GG E XXXXXXXXXXXXXGGW
Sbjct: 16 VGINVLRKGGGVVGGDEEVTAEGFARGVQDSWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVVLALEEIHGRLVGNLAKAAGGXXXXXXXXLSSLGWGWEDLKRWASDGWGGSXXXXXXXXXXXXXXXFRGFHLGGFENFFRESWNVDVPPGSVLLALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAAGGGWLVGQDALASRGVCPICLDAFSEAADGSGADTKGLVGADGMPAATLPDCGHTFCQR-------------------------------------------------------------------------------------------------------------------------------------------------------PSGASANPGVSRTGRLGETGGEQARERARREAAFQLASLGSQYPKFLDDRTVNRWLSKDYSSSWSRDPMLALNRPQDTGSDNGRVGGGGARKGSGWVTNGSRGLGGEERXXXXXXXXXXXXXGGW 426
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: A0A6H5JG24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG24_9PHAE) HSP 1 Score: 481 bits (1238), Expect = 6.390e-159 Identity = 267/320 (83.44%), Postives = 274/320 (85.62%), Query Frame = 1
Query: 442 MLASPSGGGAGRGGVGINVLKKGGGVVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLALEEIHRRLLENLAKAAGGGGDGAAGSLSSLGWGWEDLKRWASDG------RGGSRGGGDXXXXXXXXXRGFHLGSFGRFFGESLNVDVPPGSVLVALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAVGGWSVGQDAFASQGVCPICLDAFSEAADGSGADTKGLVGADGMAAATLPDCGHTFCQRRVARPLMMEDRACLSRW 1383
MLASP GGAG GGVGINVL KGGGVVGG EEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLL LEEIHRRL ENLAKAAGGG DG AG+LSSLGWGWEDLKR AS G XXXXXXXX RGFHLG F FGE+ +DVPPGSVL+ALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSA GGWSVGQDA AS+GVCPICLDAFSEAADGSGADTKGLVGAD M AATLPDCGHTFCQRR+ P M R L +W
Sbjct: 1 MLASPPRGGAGGGGVGINVLNKGGGVVGGGEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLGLEEIHRRLFENLAKAAGGG-DGGAGALSSLGWGWEDLKRRASGGWXXXXXXXXXXXXXXXXXXXXXXFRGFHLGGFENSFGENWKLDVPPGSVLLALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAGGGWSVGQDALASRGVCPICLDAFSEAADGSGADTKGLVGADRMPAATLPDCGHTFCQRRLPIP-MERRRKRLEQW 318
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: A0A835YUD5_9STRA (TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 3.310e-17 Identity = 122/450 (27.11%), Postives = 171/450 (38.00%), Query Frame = 1
Query: 193 WSVDLLPSPTLDPVGCGHPRERLRDGSFLCDPDGLLTTAGAQRAEEELESISSL-QTPCGEAVEGDEQQQLMGDIEGGVAVVSRMLASPSGGGAGRGGVGINVLKKGGGVVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLAL------------EEIHRRLLENLAKA------------AGGGGDGAAGSLSSLGWGWEDLKRWASDG--RGGSRGGGDXXXXXXXXXRGFHLGSFGRFFGESLNVDVPPGSVLVALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAVGGWSVGQDAFASQGVCPICLDAF-SEAADGSGADTKG----LVGADGMAAATLPDCGHTFCQRRVARPLMMEDRACLSRWTGDGSGSSGGNPQACPCPICD 1446
W+ D P PV C + + + LCDPD L+ A R E ELE +++ Q+ CG EG Q + ++ + P+G D T FA+ +QD W VG C NG +L+ S RSFA+S+G GLE LP R+A L+AM P LR GD AVL AL ++ HR+ + +A AGGGG R G+ D RF +P G L AL L A+A+ RR+ +E +A+ SA G + G + ++ CP+CL+ F + DG G+ G +G G+ L CGH +C R+CL S+ G + PCPICD
Sbjct: 34 WATDDYPDLQRTPVLC-RAADAPNNAALLCDPDATLSPPNADRIEAELERLATAYQSACGP--EGSYQPLQL------AVAIADAIHIPAGA---------------------DTHATTAEFAKRLQDAWGVGHADCHNGALLLVSLRTRSFALSIGTGLEVTLPKAKRDAVLDAMVPWLRRGDTAAAVLAALRLLDGLLLAESQKQQHRKRGPPMLRAVPSADGHLNVNEAGGGGXXXXXXXXXXXXXXXXXXXXXXXXXHRSGTTAASDAL----------------RFLRRHSQFALPAG--LSALFLFDSWRRAQAADFRRK----------VEELQALQQRSA--GAADGAPSAEARSSCPVCLEPFKATVTDGGGSGGAGGEELPLGKAGLPLVEL-QCGHRYC------------RSCLGGMLRSAGASTCG--PSSPCPICD 408
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: A0A7S0F4B4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F4B4_9CRYP) HSP 1 Score: 88.6 bits (218), Expect = 1.450e-14 Identity = 60/205 (29.27%), Postives = 93/205 (45.37%), Query Frame = 1
Query: 181 SSTGWSVDLLPSPTLDPVGCGHPRERLRDGSFLCDPDGLLTTAGAQRAEEELESISSLQTPCGEAVEGDEQQQLMGDIEGGVAVVSRMLASPSGGGAGRGGVGINVLKKGGGVVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLALEEIHRRLLE 795
SS GW LP+P+ R ++ S +CDPDGL++ A + +E +++ + D+Q + D++ VA+V+RM D A +AR V D W +G G NG +L S+EDR IS G+ LP N ++ M+P+LR+G +D A+L L+EI R+ E
Sbjct: 74 SSKGWPSHALPNPSTKEGANACGRSSVQHSSSVCDPDGLISRKSADQIDEMIDAARK------QISFTDDQSSQVHDLQIAVAIVNRMGDEDK-----------------------DRRALASRYARQVHDSWGLGDAGVGNGVLLFVSKEDRQVYISTGRLARSRLPDSVCNQIVDIMRPVLRKGYFDQALLKGLQEIITRVSE 249
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: L1I404_GUITC (TPM_phosphatase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I404_GUITC) HSP 1 Score: 88.2 bits (217), Expect = 1.700e-14 Identity = 57/202 (28.22%), Postives = 93/202 (46.04%), Query Frame = 1
Query: 190 GWSVDLLPSPTLDPVGCGHPRERLRDGSFLCDPDGLLTTAGAQRAEEELESISSLQTPCGEAVEGDEQQQLMGDIEGGVAVVSRMLASPSGGGAGRGGVGINVLKKGGGVVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLALEEIHRRLLE 795
GW LP+P+ R ++ S +CDPDGL++ A + +E +++ + D++ L+ D++ VA+V++M G D A +AR V D W +G G NG +L S+EDR IS G+ LP N ++ M+P+LR+G +D A+L ++EI R+ E
Sbjct: 67 GWPSSALPNPSTKEGASACGRSTVKHSSSVCDPDGLISRKSADQMDEMIDAARK------QVGLKDDETSLVHDLQIAVAIVNKM-----------------------GPADKDRRELATRYARQVHDNWGLGSAGIGNGVLLFVSKEDRQVYISTGRLARNKLPDSVCNQIVDVMRPVLRQGYFDQALLKGVQEIITRISE 239
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: A0A7S0UM02_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UM02_9CHLO) HSP 1 Score: 76.3 bits (186), Expect = 1.200e-10 Identity = 68/231 (29.44%), Postives = 111/231 (48.05%), Query Frame = 1
Query: 172 TVSSSTG-WSVDLLPSPTLDPVGCGHPRERLRDGSFLCDPDGLLTTAGAQRAEEELESISSLQTPCGEAVEGDEQQQLMGDIEGGVAVVSRMLASPSGGGAGRGGVGINVLKKGGGVVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLALEEIHRRLLENLAKAAGGGGDGAAGSLSSLGW 861
TV SST W+ P+P +D CG R L+ S++CDPDG+LT AGA AE ++ I + P V+ Q L + +A++ ++ +P+ L D+ V A A+ + W VG CDNG +L+ + +R +S GK L+ L ++ + M+P+L+E ++D A+ A+ ++ L+ A + GGG G S LG+
Sbjct: 20 TVKSSTHPWTPSDYPNPFIDVNKCG--RGGLK--SWVCDPDGVLTKAGADVAEGIIKEIFAGLDPYA-LVDCGSQGHLGAQVA--LALMDEIVTNPA-------------LA--------DDAVQAREMAKSLHAQWGVGDAVCDNGALLLLAVRNRQIYVSRGKALKERLNDDALDSVFDRMRPMLKEKNYDSAIEGAVVDLGL-LIAGKAPSGGGGAGSDGGDDSVLGF 221
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: A0A0G4GAY4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GAY4_VITBC) HSP 1 Score: 73.2 bits (178), Expect = 4.050e-10 Identity = 49/196 (25.00%), Postives = 82/196 (41.84%), Query Frame = 1
Query: 193 WSVDLLPSPTLDPVGCGHPRERLRDGSFLCDPDGLLTTAGAQRAEEELESISS-LQTPCGEAVEGDEQQQLMGDIEGGVAVVSRMLASPSGGGAGRGGVGINVLKKGGGVVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLALEEI 777
W + P P P CG + ++CDPDG+L+ A++ + L I+S CG E GVA++ +M I+ L G E FA + + W +G C+NG +++ S++D + G G + L + + M+P LR+GD+D A + +E+I
Sbjct: 18 WRYEEYPDPITQPFACGQ-----KTSGWICDPDGILSRKAAEQVSDTLRRITSETSVLCGPGKR---------PFEMGVALMQQMSRKQ-----------IHTL--------GGYGTGTERFAEKLGNHWAIGNGRCNNGILMLISKDDSVVYVKTGTGAQETLKNQHLADVIQRMRPALRKGDYDAATVQGVEDI 180
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: A0A1D2A8A0_AUXPR (RING-type domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A8A0_AUXPR) HSP 1 Score: 73.2 bits (178), Expect = 1.270e-9 Identity = 55/180 (30.56%), Postives = 75/180 (41.67%), Query Frame = 1
Query: 193 WSVDLLPSPTLDPVGCGHPRERLRDGSFLCDPDGLLTTAGAQRAEEELESISSLQTPCGEAVEGDEQQQLMGDIEGGVAVVSRMLASPSGGGAGRGGVGINVLKKGGGVVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLR 732
W+ P+P +D CG R S +CDPDG+L A A R E ++ I + P GDE + M GVA++ M P G + AE FA V W VG C+NG +L+ + + R IS G G + LP A + A +PLLR
Sbjct: 21 WTPSTFPNPKVDIGKCGR-----RVASNICDPDGVLAQAEADRVEGVIKDIWAGVDPYIRKKCGDEMEGYMV----GVALMRSMHVDP----------------------GQEPGAAAEAFAHAVHAAWGVGSAACNNGVLLLLALDQRQVYISTGAGATKALPDAHLAAIIAAARPLLR 169
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: UPI0013DABBF3 (TPM domain-containing protein n=1 Tax=Pyxidicoccus caerfyrddinensis TaxID=2709663 RepID=UPI0013DABBF3) HSP 1 Score: 68.6 bits (166), Expect = 2.380e-8 Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 538 VTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLALEEIHRRL 789
V E +A V + W+ G +G DNG +LV + DR + VG GLE YLP L+A PLLR+GD+ GA+L ++ + R+
Sbjct: 65 VPIEDYALQVAEAWKGGGKGQDNGLLLVLAVNDRRQRLEVGYGLEEYLPDDAVRTLLDAQGPLLRQGDYGGALLAVVQGVRLRI 148
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Match: A0A0R0CZ58_9GAMM (Dehydrogenase (Fragment) n=1 Tax=Pseudoxanthomonas dokdonensis TaxID=344882 RepID=A0A0R0CZ58_9GAMM) HSP 1 Score: 60.1 bits (144), Expect = 6.020e-6 Identity = 41/125 (32.80%), Postives = 65/125 (52.00%), Query Frame = 1
Query: 517 VVGGDEEVTAEGFARGVQDGWRVGKRGCDNGFVLVASREDRSFAISVGKGLERYLPPRDRNAALNA-MKPLLREGDWDG------AVLLAL---EEIHRRLLENLAKAAGGGG--DGAAGSLSSL 855
+V + T E +++ V D W++G++G D+G +L+ +++DR I G GLE +P N + + P R GD+ G AVL+ L E + + +N A A GGGG D G L+ L
Sbjct: 68 MVASTQPETIEQYSQRVFDQWKLGRKGVDDGVLLLVAKDDRKVRIQPGYGLEGAIPDAIANRVIQEYLVPHFRAGDFGGGIVAATAVLVTLIDGEALPEPVSDNRASARGGGGXXDWLGGLLAGL 192 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96.21214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig96.21214.1 >prot_Ecto-sp13_S_contig96.21214.1 ID=prot_Ecto-sp13_S_contig96.21214.1|Name=mRNA_Ecto-sp13_S_contig96.21214.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=708bp MMAVGRQDCCRVLALCSAGVLLLASSAVAVGHHRDHDGGRTTSSTVSSSTback to top mRNA from alignment at Ecto-sp13_S_contig96:28919..36561+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig96.21214.1 ID=mRNA_Ecto-sp13_S_contig96.21214.1|Name=mRNA_Ecto-sp13_S_contig96.21214.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7643bp|location=Sequence derived from alignment at Ecto-sp13_S_contig96:28919..36561+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig96:28919..36561+ >mRNA_Ecto-sp13_S_contig96.21214.1 ID=mRNA_Ecto-sp13_S_contig96.21214.1|Name=mRNA_Ecto-sp13_S_contig96.21214.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2124bp|location=Sequence derived from alignment at Ecto-sp13_S_contig96:28919..36561+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |