mRNA_Ecto-sp13_S_contig9584.21198.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9584.21198.1
Unique NamemRNA_Ecto-sp13_S_contig9584.21198.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: D8LID3_ECTSI (GPA3, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID3_ECTSI)

HSP 1 Score: 449 bits (1156), Expect = 1.180e-157
Identity = 223/234 (95.30%), Postives = 232/234 (99.15%), Query Frame = 1 
Query:    1 AIRENLVESMKTLLDAAESMGIPLANAELEEEAERVRNTDLAMADMPSTLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIEGE 702
            AIRENLVESMKTLLDAAESMGIPLANAELEEEAERVR+T+LA ADMPSTLGYDILKLWQD+GVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFT+VDVGGQRNERKKWLHCFDDVKAVVFI+SLAGYNQVMFEDA+RNRLLEAM+LYVDVVSNPIFRDTPIHVLLNKTDLFA+MIQEVPLS CFPEYGGPPGEVLPAISFIEG+
Sbjct:   70 AIRENLVESMKTLLDAAESMGIPLANAELEEEAERVRSTELATADMPSTLGYDILKLWQDQGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTVVDVGGQRNERKKWLHCFDDVKAVVFIVSLAGYNQVMFEDATRNRLLEAMELYVDVVSNPIFRDTPIHVLLNKTDLFAEMIQEVPLSVCFPEYGGPPGEVLPAISFIEGK 303
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BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: A0A6H5JSL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL8_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 6.340e-143
Identity = 202/209 (96.65%), Postives = 207/209 (99.04%), Query Frame = 1 
Query:   73 ANAELEEEAERVRNTDLAMADMPSTLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIEG 699
            ANAELEEEAERVRNTDL  ADMPS+LGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVF++SLAGYNQVMFEDA+RNRLLEA+DLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIEG
Sbjct:   24 ANAELEEEAERVRNTDLTTADMPSSLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFVLSLAGYNQVMFEDATRNRLLEALDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIEG 232
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: A0A6S9GGW2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GGW2_HETAK)

HSP 1 Score: 249 bits (635), Expect = 1.680e-78
Identity = 120/235 (51.06%), Postives = 170/235 (72.34%), Query Frame = 1 
Query:    1 AIRENLVESMKTLLDAAESMGIPLANAELEEEAERVRNTDLAMADMPSTLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRL-AQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIEGE 702
            AIR N ++ M+T+L+A +++ I ++  EL E A RV+    A A +   L  +I  LW D GVQ  + R+ ++W+LD+ PYY+ E +RL A D  D TEED++MTRV T+G+   E  D P ++ IVDVGGQR+ER+KW+HCFDDVKA++F++ L+GYNQV+FED ++NR+ E+++L+ DVV NPIF DTPI+V LNK DLF  +I++  L  CFPEY GP GE+ PA+ FIEG+
Sbjct:   73 AIRRNAIDVMQTILEAMDTLSIDVSKEELSEAATRVKEI-AADATLTPDLAQNIADLWADAGVQACYERRAEYWLLDAAPYYLDEVLRLGAADYADPTEEDMIMTRVRTTGIVITEFDDGPSRYNIVDVGGQRSERRKWIHCFDDVKAIIFLVGLSGYNQVLFEDNTQNRMTESLELFQDVVRNPIFADTPIYVFLNKKDLFEILIKDNSLKKCFPEYDGPDGEMQPALEFIEGK 306
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: A0A835Z6Q6_9STRA (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q6_9STRA)

HSP 1 Score: 247 bits (630), Expect = 9.560e-78
Identity = 117/232 (50.43%), Postives = 164/232 (70.69%), Query Frame = 1 
Query:    1 AIRENLVESMKTLLDAAESMGIPLANAELEEEAERVRNTDLAMADMPSTLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIE 696
            AIR N+++SM+T+LDA ES GI LA     + A RVR  D A A +   L  D+  LW D G++  + R+D+FW+LD++ YY  EA+RLA+   + T+ED++MTR+ T+G+   E  D P  F++VDVGGQR+ER+KW+HCFDDVKA++F+  L+GY+QV+FED + NR+ E++ L+ +VV NPIF +TP+ V LNK DLF  MI +  L  CFP Y GP GEV PA+ +IE
Sbjct:   72 AIRRNVIDSMQTMLDAMESFGIELARPGSGDAAARVRGAD-AEAALSEALAADVTALWADEGLRACYERRDEFWLLDASHYYFEEAMRLAEPDYEPTDEDMIMTRIRTTGIVVTEFEDKPYSFSLVDVGGQRSERRKWIHCFDDVKAIIFLEGLSGYHQVLFEDTAVNRMHESLQLFEEVVKNPIFTNTPVFVFLNKKDLFEQMIVKTSLKVCFPAYDGPDGEVRPALEYIE 302
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: D8LTN0_ECTSI (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN0_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.450e-77
Identity = 116/236 (49.15%), Postives = 166/236 (70.34%), Query Frame = 1 
Query:    1 AIRENLVESMKTLLDAAESMGIPLANAELEEEAERVRNTDLAMADMPSTL----GYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIE 696
            AIR N++ESM+TL+D   ++G+ L   +  +E  +    ++A+     TL      D+ KLW D G+QE W+R+ +FW LD+TPYY++EA RLA   +++T+ED++MTR  T+G+   E  D P  +++VDVGGQR+ER+KW+HCFDDVKA+VF++ L+GY+QV+FED S NR+ E+++L+ +V  NPIF  TPI V LNK DLF +MI    L  CFPEY GP GE +PA+ FIE
Sbjct:   72 AIRRNVIESMQTLIDTLGTLGLALKGDD--QEGLKAAKENIALLTPEDTLTPEIAEDVSKLWADEGMQELWSRRSEFWALDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEVAGNPIFEKTPIFVFLNKKDLFEEMIVTKSLKKCFPEYDGPDGEAMPALRFIE 305
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: A0A812S7L1_SYMMI (GpaH protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7L1_SYMMI)

HSP 1 Score: 245 bits (626), Expect = 3.020e-77
Identity = 114/232 (49.14%), Postives = 169/232 (72.84%), Query Frame = 1 
Query:    1 AIRENLVESMKTLLDAAESMGIPLANAELEEEAERVRNTDLAMADMPSTLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIE 696
            A+R N +ES++ L++A++++ I L ++ L +E   ++ TD   ADM  TL   I  +W D+G+Q T+ R+ +FW LD+TPYY+ E  R A +  D+TEED++M R+ T+G+   ++ DPP  + +VDVGGQR+ER+KW+HCFD+V A++F+  L+GYNQV+FED + NR+ E++ L+ D+  NP+FRDTPI + LNK DLF +MI + PLS CFPEY GPPG+V PA+ FIE
Sbjct:   70 ALRRNTIESIQVLIEASKTLKIALEDSALAKEIANLQ-TD---ADMDETLAKKISGMWGDKGIQATFERRSEFWCLDATPYYLTEVFRFASE-FDVTEEDILMARIRTTGIVVTQVPDPPYVYHVVDVGGQRSERRKWIHCFDNVNAIIFLEGLSGYNQVLFEDNTVNRMQESLQLFEDIAKNPLFRDTPIFIFLNKKDLFENMIPKYPLSNCFPEYDGPPGKVRPAVEFIE 296
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: A0A835ZGM8_9STRA (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM8_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.570e-74
Identity = 122/237 (51.48%), Postives = 167/237 (70.46%), Query Frame = 1 
Query:    1 AIRENLVESMKTLLDAA-ESMGIPLANAELEEEAERVRNTDLAMAD--MPSTLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIEGE 702
            A+R N++ESM  LL+A  + + IPLA++ L   A+RV    L   D  +   L  D+  LWQD GVQ  WA++ KF ILD++P+Y REAVR+A  + +ITEED++M+R  T+GV    + +PP +F++VDVGGQRNERKKW+H FDDVKAVVF++SL GY+QVMFED ++NR+ E+++L+  +VSNP+F    I +LLNK DLF   IQ V L  CFPEY G  G V+ AI F+E +
Sbjct:   74 ALRFNVLESMGVLLEAMHQQLEIPLADSALAPAAQRV----LMQRDGCLTVELAQDVQALWQDEGVQAAWAQRGKFHILDASPFYFREAVRIADPAFEITEEDLIMSRSTTTGVKVATLPEPPFEFSVVDVGGQRNERKKWIHIFDDVKAVVFVVSLVGYSQVMFEDPTKNRMHESLELFEQIVSNPLFEGVHIFLLLNKKDLFEQAIQHVSLKTCFPEYEGEDGNVMAAIEFVENK 306
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: A0A151ZGS6_9MYCE (G-protein subunit alpha 8 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZGS6_9MYCE)

HSP 1 Score: 238 bits (606), Expect = 7.970e-74
Identity = 114/233 (48.93%), Postives = 162/233 (69.53%), Query Frame = 1 
Query:    4 IRENLVESMKTLLDAAESMGIPLANAELEEEAERVR--NTDLAMADMPSTLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIE 696
            I +N V  M+ LL+A E++G+ L NAE  + A+ VR    +  +  MP ++G DI +LW+D  +Q+ W R+ +FW LD+TPYY     R  +D    TEED +MTRV T+G+   E  + P+ F +VDVGGQRNERKKW+HCFDDVKA++F+++LAGY+QVMFED S+NR+ E++ L+  + +NPIF +TP  ++LNK DLF  MIQ+  LS CFP+Y G P +V  A+ FI+
Sbjct:   72 IHKNTVLCMQVLLEAGETLGVVLQNAETNKRAQNVRAFQFESDVKQMPVSIGLDIEELWKDAEIQKIWERRSEFWFLDATPYYFENIQRFLEDDFVPTEEDCIMTRVRTTGISVTEFDEGPVHFRVVDVGGQRNERKKWIHCFDDVKALLFVVNLAGYDQVMFEDPSQNRMQESLTLFGQICNNPIFAETPTFLVLNKKDLFESMIQKTDLSKCFPDYKGGP-DVKQALDFIQ 303
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: A0A835YY90_9STRA (GPA4, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY90_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.310e-72
Identity = 114/237 (48.10%), Postives = 159/237 (67.09%), Query Frame = 1 
Query:    1 AIRENLVESMKTLLDAAESMGIPLANAELEEEAERVRNTDLAMADMPSTLGY----DILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIEG 699
            AIR+N VE M+ +L A     IPLAN     EA     T +      +T       DI +LW D GV+  + ++D +W+LD+  YY  E  R+A    + TE+DV+MTRV T+G+ S + ++PP  +++VDVGGQRNER+KW+HCF++VKAVV+++ L+GYNQ +FEDAS NR+ E++ L+  VV NPIF+DTPI + LNK DLF  MI++  L ACFPEY GP G+V  A+ F+EG
Sbjct:   67 AIRKNSVECMQAVLQAMTVHSIPLAN-----EANAEARTRILTIQEDTTFSQQVADDITQLWSDTGVKACYEKRDLYWLLDAAAYYFDEVQRIADPGFEPTEDDVIMTRVRTTGIDSTDFVEPPFSYSVVDVGGQRNERRKWVHCFENVKAVVYLVGLSGYNQCLFEDASVNRMQESLKLFKQVVGNPIFKDTPIFLFLNKKDLFEQMIRKTSLRACFPEYSGPDGDVHAALQFVEG 298
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Match: UPI0006449EC0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449EC0)

HSP 1 Score: 234 bits (596), Expect = 1.970e-72
Identity = 110/235 (46.81%), Postives = 163/235 (69.36%), Query Frame = 1 
Query:    4 IRENLVESMKTLLDAAESMGIPLANAELEEEAERVRNTDLA--MADMPSTLGYDILKLWQDRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTSGVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQVMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVPLSACFPEYGGPPGEVLPAISFIEGE 702
            I +N V  M+ LL+A E++G+ L++ E ++ A  +R+      +  MP ++G DI +LW+D+ +Q+ W R+ ++W LD+TPYY     R   D    TEED++MTRV T+G+   E  + P+ F +VDVGGQRNERKKW+HCFDDVKA++F+++LAGY+QVMFED ++NR+ E++ L+  + +NPIF DTP  ++LNK DLF  MIQ+  LS CFP+Y G     L A+ FI+G+
Sbjct:   73 IHKNTVLCMQVLLEACETLGVELSDQESKKRANNIRSFQFEQEVKQMPVSIGLDIEELWKDQDIQKIWERRSEYWFLDATPYYFDNINRFLDDDFRPTEEDIIMTRVRTTGISVTEFDEGPVHFRVVDVGGQRNERKKWIHCFDDVKALLFVVNLAGYDQVMFEDPTQNRMQESLTLFGQICNNPIFADTPTFLMLNKKDLFEQMIQKTDLSKCFPDYDGGNDTKL-ALEFIKGK 306
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9584.21198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LID3_ECTSI1.180e-15795.30GPA3, alpha subunit of a heterotrimeric G protein ... [more]
A0A6H5JSL8_9PHAE6.340e-14396.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6S9GGW2_HETAK1.680e-7851.06Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835Z6Q6_9STRA9.560e-7850.43GPA5, alpha subunit of a heterotrimeric G protein ... [more]
D8LTN0_ECTSI1.450e-7749.15GPA5, alpha subunit of a heterotrimeric G protein ... [more]
A0A812S7L1_SYMMI3.020e-7749.14GpaH protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A835ZGM8_9STRA1.570e-7451.48GPA5, alpha subunit of a heterotrimeric G protein ... [more]
A0A151ZGS6_9MYCE7.970e-7448.93G-protein subunit alpha 8 n=1 Tax=Tieghemostelium ... [more]
A0A835YY90_9STRA1.310e-7248.10GPA4, alpha subunit of a heterotrimeric G protein ... [more]
UPI0006449EC01.970e-7246.81hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9584contigEcto-sp13_S_contig9584:1651..5928 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score436.4
Seed ortholog evalue8e-120
Seed eggNOG ortholog2880.D8LID3
Preferred namegpaH
Model size702
KEGG koko:K04630
KEGG Pathwayko04015,ko04022,ko04024,ko04062,ko04071,ko04261,ko04360,ko04371,ko04540,ko04611,ko04670,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04730,ko04914,ko04915,ko04916,ko04921,ko04923,ko04924,ko04926,ko04934,ko04971,ko05012,ko05030,ko05032,ko05034,ko05133,ko05142,ko05145,ko05200,map04015,map04022,map04024,map04062,map04071,map04261,map04360,map04371,map04540,map04611,map04670,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04730,map04914,map04915,map04916,map04921,map04923,map04924,map04926,map04934,map04971,map05012,map05030,map05032,map05034,map05133,map05142,map05145,map05200
KEGG ModuleM00695
Hectar predicted targeting categoryother localisation
GOsGO:0001664,GO:0003674,GO:0003824,GO:0003924,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005834,GO:0005886,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0008150,GO:0009898,GO:0009966,GO:0009987,GO:0010469,GO:0010646,GO:0010810,GO:0010811,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019897,GO:0019898,GO:0022407,GO:0022409,GO:0023051,GO:0023052,GO:0030155,GO:0031234,GO:0031683,GO:0032092,GO:0032101,GO:0032103,GO:0032991,GO:0040012,GO:0040017,GO:0043393,GO:0043937,GO:0043938,GO:0044093,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044877,GO:0045595,GO:0045785,GO:0048518,GO:0048519,GO:0048583,GO:0048584,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050920,GO:0050921,GO:0050923,GO:0050924,GO:0051094,GO:0051098,GO:0051099,GO:0051716,GO:0065007,GO:0065009,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1900120,GO:1900122,GO:1902494,GO:1903664,GO:1903665,GO:1903667,GO:1903669,GO:1905360
Exons6
EggNOG free text desc.G-protein beta/gamma-subunit complex binding
EggNOG OGsKOG0082@1,KOG0082@2759
Ec32 ortholog descriptionGPA3, alpha subunit of a heterotrimeric G protein
Ec32 orthologEc-18_004090.1
Cds size675
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04031,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9584.21198.1prot_Ecto-sp13_S_contig9584.21198.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9584 1678..5928 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464223.533671-UTR-Ecto-sp13_S_contig9584:1650..16771681464223.533671-UTR-Ecto-sp13_S_contig9584:1650..1677Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9584 1651..1677 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464223.5484717-CDS-Ecto-sp13_S_contig9584:1677..17221681464223.5484717-CDS-Ecto-sp13_S_contig9584:1677..1722Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9584 1678..1722 +
1681464223.5598376-CDS-Ecto-sp13_S_contig9584:2540..26781681464223.5598376-CDS-Ecto-sp13_S_contig9584:2540..2678Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9584 2541..2678 +
1681464223.5706775-CDS-Ecto-sp13_S_contig9584:3311..33951681464223.5706775-CDS-Ecto-sp13_S_contig9584:3311..3395Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9584 3312..3395 +
1681464223.5809963-CDS-Ecto-sp13_S_contig9584:4284..44671681464223.5809963-CDS-Ecto-sp13_S_contig9584:4284..4467Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9584 4285..4467 +
1681464223.5901022-CDS-Ecto-sp13_S_contig9584:5214..52971681464223.5901022-CDS-Ecto-sp13_S_contig9584:5214..5297Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9584 5215..5297 +
1681464223.599546-CDS-Ecto-sp13_S_contig9584:5786..59281681464223.599546-CDS-Ecto-sp13_S_contig9584:5786..5928Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9584 5787..5928 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9584.21198.1

>prot_Ecto-sp13_S_contig9584.21198.1 ID=prot_Ecto-sp13_S_contig9584.21198.1|Name=mRNA_Ecto-sp13_S_contig9584.21198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
MKTLLDAAESMGIPLANAELEEEAERVRNTDLAMADMPSTLGYDILKLWQ
DRGVQETWARKDKFWILDSTPYYMREAVRLAQDSVDITEEDVVMTRVMTS
GVGSIEILDPPIKFTIVDVGGQRNERKKWLHCFDDVKAVVFIISLAGYNQ
VMFEDASRNRLLEAMDLYVDVVSNPIFRDTPIHVLLNKTDLFADMIQEVP
LSACFPEYGGPPGEVLPAISFIEGE
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mRNA from alignment at Ecto-sp13_S_contig9584:1651..5928+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9584.21198.1 ID=mRNA_Ecto-sp13_S_contig9584.21198.1|Name=mRNA_Ecto-sp13_S_contig9584.21198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4278bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9584:1651..5928+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCCATCCGAGAAAACCTGGTGGAAAGCATGAAGACCCTTTTAGACGCCGC
AGAATCGATGGGAATCCCGTTGGTGAGAGGGGGGGGCGGCGGAGCGCCCG
GGGTATCTACTACATGCGGCGACGGGCGTGTGAAAATATCGCGAGTTTTG
AACGACGTGCAGGCGGAGGTTGGAGTAGCATGCCTCCCGTACCCGATGCA
TGCTTCCGCGATGCGTAAACCTGGCCGTGTTCAAGCTGGGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAATTGCGCTTCGGCACGTCTTGTGTGTTACTCGGGTGTGA
ATATGAAGTCCCTTCTCCTTGTGCGCAATCCCGTGGGGTTCGGAAGGTTT
TCGACCTTGGTCAATTGTGGATGCGGGAGTTGGCCTCTTGGCGCTTGTTT
TCCTTGACCTCCACCAGGTTTCTAAAGCATGGTTTAGCCTGCTGGGTAAC
CCGGCTTCGTCCCTCTACACTGTTGCTGTGGACTTGCGAGGCTGATACGC
GTGCATTTAGACTGCTGCGAGGTCCCTGTGGTCGAGAATTAAGTTGTGCG
CACGCAAACCAAACCCGAGAGCATTTGGTTTGAACCAACCAGGAGTATTT
GGGCTCAGTTGAATCCCTCCCCTTATGCCCCGCTTTTCTGTTGTTTTTTC
CAAGCATTTTTTTGGCGTCTTGAGCTGCTCCTTGGATTCGTGTTTTCCGA
ATGTGCATGAGCCGTTAGAACCAACCAACCCAGGTCTGAATCGAGATTCA
CACGAAGCACCAAAGCGGTTGATGCTCAGTGTTTCTCATCGTGCTTCGTT
CGTGTGTACCTCGGCCTTTTCCGTGTGCTTGTAACGCCAGGCGAATGCTG
AGCTAGAAGAGGAGGCGGAGCGGGTACGGAATACAGACCTGGCAATGGCA
GACATGCCGTCTACCTTGGGCTACGACATCCTCAAGCTGTGGCAGGACCG
AGGGGTACAAGAGACGTGGGCCAGAAAGGTGAGGAGTTTTTTTTTTTTGC
GCCGGCGCGGTAGCTGCTGTTGCTGCTGCTGCCGTCGGCTTGTGCCTCAA
ACACACCGCTGGCAATACCTCGAAGAGCGTAGTTGATGTTGCCTTTCGCG
TCGCGTGATGGTTTTCGATGACCTGGAATTGGCCGAGACAGCAAAACCAA
TGCCCGCTCCGGGTGCCAGTCACGCCGCATCAAGGGCATCCAATCGACCC
TTTCGGGCGGGAATTATTACCGCCAAACAAGTGTAATTGGTGTGTGGCGT
CCTCTGCCGCCATGGGGCGTGTGCGACGCATATTGATTGCTATCGCTGCC
GTTTTTCAAGCCGTCGAGCCGTACGTGAGCATGCATTACATGTTTTCGAT
CTGTGATGCACGCATCTCAGTTTTCGCTTGGTGGTCTGTCGTGCTTGTTC
TGTCGGCCTGTAGCACGGGACGTCTTGTTGCAGCTCATGCGTAGCCTGTG
GTCGTTCTTGGTTCTTGCAGATGTTCTTTTGCCCTGGCACGGCAGCAATG
AACGTATTTTCGTCAACATTAGAGGGAAATGTGAATAAGGTTGTACCCGT
GTCCCGTGTGCTTTTTCGCCGTCCTCTTTATCGTACTTGCGGGGGTGCTG
GCCTGGATCAGGACAAGTTCTGGATACTCGACAGCACCCCGTACTACATG
AGAGAGGCGGTGCGATTGGCGCAAGACAGTGTTGACATCACGGAGGTAAG
CACATGTCTTGTCCTCTCCTCGCAATCACAGGCGCCTTCATATGTATCTC
TCCGCTGCTACCACACAACACGACGAAATGGACGGTTTTTCGATGCGATA
TGCCAACACTGTTCCTTTTCCATAGGTCAATACGCCGGCTTCATACCCGG
TGTTGTTGTTTGGCGGATCGAGGATTGGTCGAAATTTTCTTCTTGGGAAA
ATGTTTTTTTCTGTCTTTTTTTTTTTACTCCAGTGGCGACATGGCGCATG
ACGAAGGATAACAACACCGGGTATGAAGCCAGTGTATTTACCCGTGGCGA
ATGAACTGCGTCGACACATGGCATCGAAGAACCGTCTAATTCGTCGTGCT
GTGTGGTAACGGCGGGGGGATACGAATGAGCGGTTGCACGTGATGCGCGA
AAGCCATGGCTCCGCCGGGAGCTCGGCTCTCTCGCGTGTCCCGAATGAGA
AGGAGCGACTTTCTCTGTCTCCTTCTGACGCCCAGCAGGTTGTTTGGTCG
CGTGGCGTCATGTTGTCGGCGGCGGTCTGATCTCCTTCGTACCCCGTCGC
TGCTTCGATATGCGGCGGAATCGATCCGGCCTCTTGCTCCTCGCTGTTCC
CGAGTTTTTGGTAGCGGGCCGTTAGAGCTGTTGAATAGAGTCTATATGGG
TTACAGGACAGACAATGTATCCGGTCGACCGACGGGCGCAATATGCGGCG
AAGAGTGAAAGTTGGTCATATCTGCTCTATGCTGTGTGCTGCAGATCCGT
CCGGCTTTCTACTGTGACTTTGCGCCCCAGGCGGGGTTTACGGCCAGCTT
ATACCCAAATCGGACCGTCTGTCACGCTGTCGTCGTATTGATACCCGTGT
GTGTTGTCTTGTTGTGTTTATGGCAATCCTCCAGGAGGACGTGGTGATGA
CTAGGGTGATGACGTCCGGCGTTGGCAGCATCGAGATCCTCGATCCGCCC
ATCAAGTTCACGATCGTGGACGTCGGCGGGCAGCGGAACGAGCGGAAGAA
GTGGCTGCACTGCTTCGACGACGTCAAGGCTGTCGTGTTCATCATCAGCC
TTGCCGGCTACAACCAGGTGGGGTGGCAGATTCCGCGGCGTGCAAGTTTT
CGACGCCACGGACGCATGTGTAGCGCATGCACGGCCTCTGTTCCACGCAC
TTGGCTAGTCAGGCCGGTGGTGATGTTGAATGGGCCGTTTGAGTTGTTAA
TGGACTACAGTAGCTAGAGCATCCTTCAGGAACCTTGCCGACAAACCTTG
TTAAAGTAGCCGCCCGCCCTTTCCGGCGTGTGTCCGAAGCCATTGAGCTG
AGTTTGTCGGGGTTTTGGAAGACAAATAGCGGTCGCGCCTCCTCGCCAAA
ATGAGATCAACTTCGAACATCGACTGAATTGCTAGCTAGGGAGAGCAAGC
GTAGACCGAATGCAAGTACGAGGACGAAACTCACACACCCGTCCAAACCC
GGTGTACATAATGGCCTGGTCTGGAACGGGAAAACGCTTGCTGGTGGTTT
TTCCGCTGGCTGTGCTCTGTCGTTTGCTCTTGTTTGAGTTGTGCACACTC
TCTGGTTGCGTCTTCTCGCGGAGAGAGGTTGCCATACTGCAGCCAACACT
GATTGATGTTGCTCGTGATACGGCCGATCGGCCTTCATTTCGAACTAAAT
TCTTCGCCCCCAAACCCTCCGGTCTCCCCCTCCTCGCGGTGCGGGTTCGA
TGTACCGTCGTTCGCGCCTTCCACGCGCTGACATATATTTTGAGAACAAG
GCCGTCTTTCTTGTCATCGCTGGCGTTGTGACTACTGCTCGTCGTACGTT
GACTGCGTCGCCAGGTGATGTTTGAAGATGCCTCGCGGAACCGACTCTTG
GAAGCCATGGACCTCTACGTCGACGTCGTGTCCAATCCCATTTTTCGGTG
AGCGTTGTACTAGCGGCGGACGATGTTTTTTGGCTGTGGTTGCCTTGTTA
TTCCCCCTGGGAAGGACACGAAGGATATGGTTGGACACCTCGGATGGAGG
ACGCGTTGGTGCCACCCACGTCTCGAACGGAAGGGATGTGATCAGTGTGA
TGGAAAGGTGCCATGGGGCAAGCTGTTGTCTCTTGCGCACGCACGCACCC
GTACTGACCGCTTTGCATTGGTCAGCCGGTGAGCGTGGTCGATGGTGACC
GACGAATTACATACCGGTGTTGACGCCCGGTCGATTTCATCATGCGGACA
AGAGAGAATGCCGCCAAAGCCTAGCCTAGCTAACACACCAGGCTTTCCTG
GAGTTGCTTTCTCCACCGCAAAGATGTTTTTGACGGAAAACCTCAAACGA
GTAAGCTATCATGCACGTAGTACTTACAGATGCAGACACACACCAGACGT
ATAACCCCACGATTTGCGCTCGTTGTTCTCCCCCAGGGATACGCCCATCC
ACGTGCTCCTTAACAAGACGGACCTGTTTGCGGATATGATCCAAGAAGTG
CCGCTGTCGGCTTGCTTCCCCGAGTATGGAGGGCCTCCGGGAGAGGTCCT
GCCGGCCATCTCCTTCATCGAAGGTGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9584:1651..5928+

>mRNA_Ecto-sp13_S_contig9584.21198.1 ID=mRNA_Ecto-sp13_S_contig9584.21198.1|Name=mRNA_Ecto-sp13_S_contig9584.21198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9584:1651..5928+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGACCCTTTTAGACGCCGCAGAATCGATGGGAATCCCGTTGGCGAA
TGCTGAGCTAGAAGAGGAGGCGGAGCGGGTACGGAATACAGACCTGGCAA
TGGCAGACATGCCGTCTACCTTGGGCTACGACATCCTCAAGCTGTGGCAG
GACCGAGGGGTACAAGAGACGTGGGCCAGAAAGGACAAGTTCTGGATACT
CGACAGCACCCCGTACTACATGAGAGAGGCGGTGCGATTGGCGCAAGACA
GTGTTGACATCACGGAGGAGGACGTGGTGATGACTAGGGTGATGACGTCC
GGCGTTGGCAGCATCGAGATCCTCGATCCGCCCATCAAGTTCACGATCGT
GGACGTCGGCGGGCAGCGGAACGAGCGGAAGAAGTGGCTGCACTGCTTCG
ACGACGTCAAGGCTGTCGTGTTCATCATCAGCCTTGCCGGCTACAACCAG
GTGATGTTTGAAGATGCCTCGCGGAACCGACTCTTGGAAGCCATGGACCT
CTACGTCGACGTCGTGTCCAATCCCATTTTTCGGGATACGCCCATCCACG
TGCTCCTTAACAAGACGGACCTGTTTGCGGATATGATCCAAGAAGTGCCG
CTGTCGGCTTGCTTCCCCGAGTATGGAGGGCCTCCGGGAGAGGTCCTGCC
GGCCATCTCCTTCATCGAAGGTGAG
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