mRNA_Ecto-sp13_S_contig9578.21189.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig9578.21189.1
Unique Name	mRNA_Ecto-sp13_S_contig9578.21189.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: A0A6H5J7W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7W8_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 2.250e-102
Identity = 175/201 (87.06%), Postives = 186/201 (92.54%), Query Frame = 1

Query:  184 PCESAVHVRGVINMVALARD*TEPFTVESVDYTDADLYDAMEEEDKPELEDSAGXXXXXXXXXXXXXXXXXGGSRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            P ++ +  RGVINMVALARD TEPFTVE VDY+ ADLYDAME+E+ PELEDSAG XXXXXXXXXXXXXXXX  S SITER+GPHC+MRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVT+RFRDP HHVRKIVDDEQV+HVNPNIIQQPNISA KITK+WSAAKAKWNTPYANWKSESGNNQPWLSF QG
Sbjct:  281 PAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKVWSAAKAKWNTPYANWKSESGNNQPWLSFCQG 481

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 1.610e-101
Identity = 175/201 (87.06%), Postives = 185/201 (92.04%), Query Frame = 1

Query:  184 PCESAVHVRGVINMVALARD*TEPFTVESVDYTDADLYDAMEEEDKPELEDSAGXXXXXXXXXXXXXXXXXGGSRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            P ++ +  RGVINMVALARD TEPFTVE VDY+ ADLYDAME+E+ PELEDSAG XXXXXXXXXXXXXXXX  S SITER+GPHC+MRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVT+RFRDP HHVRKIVDDEQV+HVNPNIIQQPNISA KITKMWSAAKAKWNTP ANWKSESGNNQPWLSF QG
Sbjct:  119 PAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQG 319

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 2.640e-99
Identity = 173/201 (86.07%), Postives = 185/201 (92.04%), Query Frame = 1

Query:  184 PCESAVHVRGVINMVALARD*TEPFTVESVDYTDADLYDAMEEEDKPELEDSAGXXXXXXXXXXXXXXXXXGGSRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            P ++ +  RGVINMVALARD TEPFTVE +DY+  DLYDAME+E+ PELEDSAG XXXXXXXXXXXXXXXX  S SITER+GPHC+MRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVT+RFRDP HHVRKIVDDEQV+HVNPNIIQQPNISA KITKMWSAAKAKWNTP ANWKSESGNNQPWLSF+QG
Sbjct:  281 PAKALLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQG 481

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 5.370e-95
Identity = 169/202 (83.66%), Postives = 181/202 (89.60%), Query Frame = 1

Query:  184 PCESAVHVRGVINMVALARD*TEPFTVESVDYTD-ADLYDAMEEEDKPELEDSAGXXXXXXXXXXXXXXXXXGGSRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            P  + +  RGV+NMVALARD TEPFTVE VDY+  ADLYDAME+EDKPELEDSAGXXXXXXXXXXXXXXXXX  S +ITER+GPHC+MRLVG+LCEDSIRPLVINSRLQATRQELD SAVGPRKHLWTEVT+RFRDP H+VR  VDDE V+HVNPNIIQQPNISA KITKMWSAAKAKWNTP ANWK ESGNNQPWLSF QG
Sbjct:  124 PASALLMFRGVVNMVALARDSTEPFTVEGVDYSSVADLYDAMEKEDKPELEDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQG 325

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 4.570e-93
Identity = 166/193 (86.01%), Postives = 176/193 (91.19%), Query Frame = 1

Query:  208 RGVINMVALARD*TEPFTVESVDYTDADLYDAMEEEDKPELEDSAGXXXXXXXXXXXXXXXXXGGSRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            RGV+NMVALARD TEP TVE VDY+ ADLYDAME+EDKPELEDSAGXXXXXXXXXXXXXXXXX  S +ITER+GPHC+MRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRK+LW EVT+RFRDP H+VRKIVDDEQV+HV  NIIQQPNISA KIT M SAAKAKWNTP ANWKSE GNNQPWLSF QG
Sbjct:    3 RGVVNMVALARDRTEPVTVEGVDYSVADLYDAMEKEDKPELEDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQG 195

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: A0A6H5L680_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L680_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 2.270e-91
Identity = 143/193 (74.09%), Postives = 157/193 (81.35%), Query Frame = 1

Query:  223 MVALARD*TEPFTVESVDYTDADLYDAMEEEDKPELEDSAGXXXXXXXXXXXXXXXXXG-----GSRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            MVALA D T+P TVE VDY+ ADLY+AME+ED+ EL DSAG                 G     GS S TER+GPHC+MRLVGILCEDSIRPLV+NSRLQATRQELDTSA GPR +LWTEVT+RFRDP +HVRK+VDDEQV+HVNPNIIQQPNISA KITKMWSAAKAKWNTP+ANWKSESGNNQPWLSF QG
Sbjct:    1 MVALACDSTKPLTVEGVDYSVADLYNAMEKEDQTELADSAGGSAPTGSSSTGGAVGPDGXXXXXGSGSNTERKGPHCMMRLVGILCEDSIRPLVMNSRLQATRQELDTSAGGPRNNLWTEVTDRFRDPGYHVRKVVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPFANWKSESGNNQPWLSFCQG 193

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: D7FSJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ6_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 1.100e-85
Identity = 147/213 (69.01%), Postives = 167/213 (78.40%), Query Frame = 1

Query:  184 PCESAVHVRGVINMVALARD*TEPFTVESVDYTDADLYDAMEEEDKPELED---SAGXXXXXXXXXXXXXXXXXGG-----SRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQGKRWV 798
            P ++ +  RGV+ MVA+ARD TEPFT E VDY+ ADLYDAM++ED+ EL D   SAG       XXXXXXXXXX       S S TER+GPHC+MRLVGILCED IRPL+I+SR QATRQELDTS VGPR  LWTEVT+RFRDP H VRKIVDDEQVNHV+PNIIQQPNIS+ K+TKMW+  K +WN  YANWK ESGNNQPWL+F QGK WV
Sbjct:   63 PAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQGKGWV 275

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 2.320e-83
Identity = 147/161 (91.30%), Postives = 155/161 (96.27%), Query Frame = 1

Query:  304 MEEEDKPELEDSAGXXXXXXXXXXXXXXXXXGGSRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            ME+EDKPELEDSAGXXXXXXXXXXXXXXXXX GS +ITER+GPHC+MRLVG+LCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVT+RFRDP H+VRKIVDDEQV+HVNPNIIQQPNISA KITKMWSAAKAKWNTP ANWKSESGNNQPWLSF QG
Sbjct:    1 MEKEDKPELEDSAGXXXXXXXXXXXXXXXXXXGSGNITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQG 161

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 7.180e-78
Identity = 146/206 (70.87%), Postives = 161/206 (78.16%), Query Frame = 1

Query:  184 PCESAVHVRGVINMVALARD*TEPFTVESVDYTDADLYDAMEEEDKPELEDSAGXXXXXXXXXXXXXXXXXGG-----SRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            P ++    RGV+NMVA ARD TEPF  E VDY+ A+L+DAMEE DKPEL DSAG         XXXXXXXX       S SITER+GPH +MRLVGI CEDSI PL INSR+QATRQELDTSAV PR +LWTEVT+RFRD  H+VRKIVDD QV+HVNPNIIQQPN SA KIT  WSAA+A WNTPYANW SESGNNQPW+SFSQG
Sbjct:  252 PAKAMPTFRGVVNMVAQARDSTEPFIFEDVDYSVANLFDAMEE-DKPELGDSAGGSAPNGGSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNVRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQG 456

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BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 4.760e-76
Identity = 144/206 (69.90%), Postives = 169/206 (82.04%), Query Frame = 1

Query:  184 PCESAVHVRGVINMVALARD*TEPFTVESVDYTDADLYDAMEEEDKPELEDSAGXXXXXXXXXXXXXXXXXGG-----SRSITERQGPHCIMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHVRKIVDDEQVNHVNPNIIQQPNISA*KITKMWSAAKAKWNTPYANWKSESGNNQPWLSFSQG 786
            P ++ +  R V+ MVA+ARD   PF V++V+Y+ ADLYDA+ +ED+    +S  XXXXXXXXXXXXXXXXX       S S TER+GPHC+MRLVGILCED+IRPL+I SRLQATRQ+LDTS+VGPR  LWTEVT RFRDP H VRKIVDDEQV+HV+PNIIQQPNISA K+++MW+ AKAKWN PYANWKSESGNNQPWLSF QG
Sbjct:  216 PAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKEDEAGKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQG 421

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9578.21189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J7W8_9PHAE	2.250e-102	87.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZX9_9PHAE	1.610e-101	87.06	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFU0_9PHAE	2.640e-99	86.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KNY9_9PHAE	5.370e-95	83.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KQ52_9PHAE	4.570e-93	86.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L680_9PHAE	2.270e-91	74.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FSJ6_ECTSI	1.100e-85	69.01	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JXZ6_9PHAE	2.320e-83	91.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JSN7_9PHAE	7.180e-78	70.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FU69_ECTSI	4.760e-76	69.90	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9578	contig	Ecto-sp13_S_contig9578:3836..5732 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	156.4
Seed ortholog evalue	8.9e-36
Seed eggNOG ortholog	2880.D7FIC6
Model size	798
Hectar predicted targeting category	other localisation
Exons	3
EggNOG OGs	2EJXG@1,2SPZB@2759
Cds size	375
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464222.969277-UTR-Ecto-sp13_S_contig9578:3835..3966	1681464222.969277-UTR-Ecto-sp13_S_contig9578:3835..3966	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig9578 3836..3966 +
1681464222.983573-UTR-Ecto-sp13_S_contig9578:4461..4633	1681464222.983573-UTR-Ecto-sp13_S_contig9578:4461..4633	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig9578 4462..4633 +
1681464223.0242302-UTR-Ecto-sp13_S_contig9578:5612..5732	1681464223.0242302-UTR-Ecto-sp13_S_contig9578:5612..5732	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig9578 5613..5732 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464223.0017083-CDS-Ecto-sp13_S_contig9578:4633..4930	1681464223.0017083-CDS-Ecto-sp13_S_contig9578:4633..4930	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9578 4634..4930 +
1681464223.0134234-CDS-Ecto-sp13_S_contig9578:5534..5612	1681464223.0134234-CDS-Ecto-sp13_S_contig9578:5534..5612	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig9578 5535..5612 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9578.21189.1	prot_Ecto-sp13_S_contig9578.21189.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig9578 4634..5612 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig9578:3836..5732+
coding sequence from alignment at Ecto-sp13_S_contig9578:3836..5732+

protein sequence of mRNA_Ecto-sp13_S_contig9578.21189.1

>prot_Ecto-sp13_S_contig9578.21189.1 ID=prot_Ecto-sp13_S_contig9578.21189.1|Name=mRNA_Ecto-sp13_S_contig9578.21189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MEEEDKPELEDSAGGSSSTGGAAGPDGGGSAGGSRSITERQGPHCIMRLV
GILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTERFRDPCHHV
RKIVDDEQVNHVNPNIIQQPNISA*

mRNA from alignment at Ecto-sp13_S_contig9578:3836..5732+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig9578.21189.1 ID=mRNA_Ecto-sp13_S_contig9578.21189.1|Name=mRNA_Ecto-sp13_S_contig9578.21189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1897bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9578:3836..5732+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCGCACCGCAAGATCCCGAGAATGTCGCAGAAGAGCAAGGATGACC
TGGTGGCGGCCCTGCGATCTCTCGACTCCAACATGAAACGGCCATCTCCG
TACTTCGACGACCTCGATGCTATCGCAGCCGGTGAGATGCTGGTATTGTG
TGGATTAGTCGTCGATTAGAGTCCCAGCAGACGACACAGAGTATCGACAA
AATATAGGTAGTTACTCTGTAGTTGAACGCAGTGTGCGCAGAGGAAACAA
AACAAAATTGCTGCTGTGTGTGTGTAGTGCCCGCTTCAAATCAACCTTTT
TGTACAGTAGGAGGTAAATTACGGCATGCTCGAGAGCTTTTGTGTTTGCC
CCAGTAGGTGGGGTATTGAAGGCCCTCACAGCGTACCACACGGCATGCTT
TCTTGATGATATTCAATCGGTGGTGCACCGACCAATACGGTAAATCTTTG
GGTGTTCTGTTCTCTCACGCCCAGAGGAAGCAAGGTAAGGTGAACGATGT
TTGTGGAGGACAGTCACTAGGAATATGTAGTTTTGCCAAATTTGGGCGTG
TACACCTGAGGCTTCCTCTCATGCGAAGGCGTATTCATTGTCTGGGCCGC
TTTCTCATATCCGGGCGTTCGCGCAGCCAAATCTGGACGCGGCAGCGAGC
AGGAGGAGGGGGAGGAGGAGGGAGTCATCCCTGCGAAAGCGCTGTTCATG
TTCGAGGCGTTATCAACATGGTCGCCCTAGCACGTGACTGAACTGAACCG
TTTACAGTCGAGAGTGTGGACTACACTGATGCGGACCTTTACGACGCCAT
GGAGGAGGAAGACAAACCGGAACTGGAGGATTCTGCCGGCGGGAGTTCGT
CGACGGGTGGTGCAGCCGGACCGGACGGGGGTGGTTCCGCCGGAGGGAGT
CGCAGCATCACGGAGCGCCAGGGCCCACACTGCATAATGCGGCTCGTTGG
GATCCTGTGCGAAGACTCCATCCGCCCACTTGTCATCAACAGCCGCTTGC
AGGCGACCCGGCAGGAGCTGGACACCTCAGCAGTTGGGCCGCGGAAACAT
TTGTGGACAGAGGTCACTGAACGCTTCCGAGACCCTTGCCACCATGTGCG
TGCTGGGGGTAGGGGGTTGATTAGCACGGATCGGACGAGCACGTTGTACA
AAAACAGCAGTCGAAGTGTATGTTGACAACACATGCCGTTTGTTGATAGT
TATTTTTAGGCATGGTACTAAACACCTCATAACGTCCACGGACGATCGCG
CCATCGTTTTAGGTAAAATGCCATTAGGTATCCAACCCCAAGAGCGGGTC
AACCTGCTGTTGACGTCTACCGGTAACTTATGTAGTTGTTGCTGACGCCG
ACGACCATACTGCTGTAGATACTGCTGTAGTTGCTTCGTTGCCTATTGTA
GTGAAAGACATTAAAAACGCCCTGAAATTTTTCAAAAGAATGCACAGATA
GCCAGACAATGTTTTATGCCAGAAGAAAATAACAGGCCGGGAAAAGACCG
ACATTGGACCTTCCCGCAAGAGAGGTGCATTCCCTCCGTTCTTTTTTTTT
TTCTTATCGAAATCGAGTTATATTCCTCGCACGTCCGGGGGGCGTCATCT
TGGTAGGTAGGTATAAGGAATACGTGTATGATCGGCGTTGCCCCTTCCCT
CGCTCCCTCGCTGTATGTTTGACCTATGGGTGCTGTGAACGTTTTTCAGG
TGAGAAAAATCGTGGACGACGAACAAGTGAATCATGTCAACCCGAACATC
ATCCAGCAACCTAACATCTCGGCGTAAAAAATTACCAAGATGTGGTCTGC
GGCAAAGGCGAAATGGAACACGCCTTATGCCAACTGGAAGAGTGAATCCG
GCAACAACCAGCCATGGCTTTCATTCTCCCAAGGCAAGAGATGGGTG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9578:3836..5732+

>mRNA_Ecto-sp13_S_contig9578.21189.1 ID=mRNA_Ecto-sp13_S_contig9578.21189.1|Name=mRNA_Ecto-sp13_S_contig9578.21189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=375bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9578:3836..5732+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGGAGGAAGACAAACCGGAACTGGAGGATTCTGCCGGCGGGAGTTC
GTCGACGGGTGGTGCAGCCGGACCGGACGGGGGTGGTTCCGCCGGAGGGA
GTCGCAGCATCACGGAGCGCCAGGGCCCACACTGCATAATGCGGCTCGTT
GGGATCCTGTGCGAAGACTCCATCCGCCCACTTGTCATCAACAGCCGCTT
GCAGGCGACCCGGCAGGAGCTGGACACCTCAGCAGTTGGGCCGCGGAAAC
ATTTGTGGACAGAGGTCACTGAACGCTTCCGAGACCCTTGCCACCATGTG
AGAAAAATCGTGGACGACGAACAAGTGAATCATGTCAACCCGAACATCAT
CCAGCAACCTAACATCTCGGCGTAA