mRNA_Ecto-sp13_S_contig9577.21187.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: D7FZQ1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ1_ECTSI) HSP 1 Score: 771 bits (1991), Expect = 1.070e-279 Identity = 392/402 (97.51%), Postives = 397/402 (98.76%), Query Frame = 1
Query: 1 DSPSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDIAQQHYKDFTRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK 1206
DSPSKIQRKAIPQIL+GGN+VFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELA+QVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRD AQ IFVTATLTKAVRKLLGEDGDY KVRQVETRDVHHTLPSL+HVMIDIKGRDKMSALIDIAQQH KDF RTLVFCNTVKSCRAAEFGLREVD+KALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK
Sbjct: 39 DSPSKIQRKAIPQILNGGNIVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAMQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDMAQFIFVTATLTKAVRKLLGEDGDYSKVRQVETRDVHHTLPSLRHVMIDIKGRDKMSALIDIAQQHLKDFKRTLVFCNTVKSCRAAEFGLREVDVKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK 440
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A6H5KY63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY63_9PHAE) HSP 1 Score: 776 bits (2003), Expect = 2.500e-279 Identity = 394/402 (98.01%), Postives = 399/402 (99.25%), Query Frame = 1
Query: 1 DSPSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDIAQQHYKDFTRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK 1206
+SPSKIQRKAIPQIL+GGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYV+VDEVDTMLTQGFAADIEKL+RPLLANPNRRDTAQ IFVTATLTKAVRKLLGEDGDYPKVRQVET DVHHTLPSL+HVMIDIKGRDKMSALIDIAQQHYKDF RTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK
Sbjct: 156 NSPSKIQRKAIPQILNGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVIVDEVDTMLTQGFAADIEKLSRPLLANPNRRDTAQFIFVTATLTKAVRKLLGEDGDYPKVRQVETSDVHHTLPSLRHVMIDIKGRDKMSALIDIAQQHYKDFKRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK 557
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA) HSP 1 Score: 455 bits (1170), Expect = 1.230e-154 Identity = 233/397 (58.69%), Postives = 296/397 (74.56%), Query Frame = 1
Query: 4 SPSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDIAQQH--------YKDFTRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKG 1170
+PS IQR AIPQI SGGN+V AA+TGSGKTLAYL+P+I LK +E ++ ++R+ RPRA+VLVPTRELA QVL V K+++ + K SSCG+ GGEDYGKQ++ LA D+VVG+PGRLLKH + G F+S+ +VV+DEVDTMLTQGF DI L +PL+ D Q + V+AT+T A+R+LL E G++PKVR VETRDVH LP++KH M+D KGRDK+S L+++ QH + RTL+FCNTV S RA + LR+ + A +YHGEVPS +R++ L F+AG LV TD+A+RGLD+P+V HV+MFDFPLNP+DYLHRSGRTARMGA+GRVTSLLAKRD VLAAAIE AV +G PLD L++RRTDY GGKL G +G
Sbjct: 41 TPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDA---TVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGE-DAVQFVLVSATVTAALRRLL-EAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRG 432
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A4D9D2M2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2M2_9STRA) HSP 1 Score: 455 bits (1170), Expect = 5.120e-153 Identity = 231/400 (57.75%), Postives = 304/400 (76.00%), Query Frame = 1
Query: 7 PSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDIAQQHYKDFTRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRK--GKVSVKGSHHS 1200
PS IQR AIP L G +V F+ASTGSGKTLAYL+P++Q+LK +EA EG E RQT RPRA++LVPTREL QVLEV K LS K SSCG+ GGED+G QR+RL G VD+VV +PGRLL+H+E G+ F S+ +VVVDE+DTML GF D+++L PL A ++R+ Q + TATLT AV++L+ E+G++PK R +++ D H +LP+++H+M+D KG DK+ L+D+ Q ++ R ++FCNTV+SCRAAE LRE+ L + YHG++ S+ER++ L++FK+G+ +LVCTDIASRGLDMP V+HVVMFDFPLNPI+YLHRSGRTARMGAKG+VTSLL KRD VLA+A++ AV GLPLD LS+R+ DY +GGKL L K S KG+ H+
Sbjct: 152 PSVIQRLAIPAALKGDDVAFSASTGSGKTLAYLLPIMQELKWQEA--VEGKE--RQTCRPRALILVPTRELVTQVLEVIKSLSHVIKLSSCGLHGGEDFGVQRRRLGGMVDLVVASPGRLLQHYEKGHVFFSQVTHVVVDEMDTMLKDGFGPDLKRLMVPLEAK-SKREKVQYLMATATLTPAVKRLMAEEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVVSQGRQNGERAMIFCNTVQSCRAAEHALRELALPSACYHGDMRSEERAAALQKFKSGEVSFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDSLSARKRDYESGGKLSGLSSGKMGASPSSKGNRHA 546
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A7S2WDP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDP9_9STRA) HSP 1 Score: 419 bits (1078), Expect = 3.440e-140 Identity = 218/383 (56.92%), Postives = 276/383 (72.06%), Query Frame = 1
Query: 4 SPSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDIAQQHYKDFTRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGP 1152
+PS IQ+ A+PQ L N+ FAASTGSGKTLAYL+P +Q LKV+E EG E R KRPRA+VLVPTRELAVQVL VAKRLS + KFSSC VVGG D+G+QR+ LAG VD+VV +PGRLLKH + F+S+ +V++DEVDTML QGF DI++L P+L +P R+ Q I TAT+T+AV++LL E G P +R +ET D+H +P+ H M++ +GRDK+ L+++ + +TLVFCNTV SCRA E LR+ +L YHGE+ S R +LE FKA LVCTD+ASRGLDMP V VVMFDFP NPIDYLHRSGRTAR G +G + SL+AKRDL L+ AIE+A+ G PLD+L++ R DY GG+L P
Sbjct: 101 APSPIQQAAVPQALQKQNLAFAASTGSGKTLAYLLPTVQALKVQEEL--EGFE--RAPKRPRALVLVPTRELAVQVLSVAKRLSHNAKFSSCAVVGGGDHGQQRRALAGVVDVVVASPGRLLKHRLNDHVFLSQVTHVIIDEVDTMLVQGFGPDIKELLGPILFSPQRKSEVQFILATATMTQAVKRLLDEGG-LPPMRILETSDLHQAVPTAMHRMVNAQGRDKIQLLLEVIRDTNLRNEQTLVFCNTVLSCRAVEHALRDAGCSSLGYHGEMNSAARLESLEAFKAADVPTLVCTDLASRGLDMPSVARVVMFDFPPNPIDYLHRSGRTARFGQRGEIVSLVAKRDLPLSTAIERAIAKGEPLDQLTNNRRDYQPGGRLAP 478
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A7S2FKV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKV5_9STRA) HSP 1 Score: 397 bits (1019), Expect = 2.020e-131 Identity = 214/406 (52.71%), Postives = 268/406 (66.01%), Query Frame = 1
Query: 7 PSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDIAQ-QHYKDFTRTLVFCNTVKSCRAAEFGLRE-------------------------VDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKL 1146
PS IQR A+PQ+L G N+ AASTGSGKTLAYL+P++Q LK++E + R KRPR +VLVPTRELA QVL VAK L KFSSC +VGG D G+QR+ L G D+ V + GRLLKH E G+ +S+ +VV+DEVDTML QGF D++KL +P+L +P RR+ Q I VTAT+TKAVR+LL EDGD P++R +E D+H LP+ H M++ G+DK+ L D+ + +H K TL+FCNTV SCRA LRE SYHGE+PS+ER L FKAG A LVCTD+A RGLD+ DV V+ FDFP NPIDYLHR+GRTAR G KG + SL+ KRDL LA AIE+AV G PLD L++ + DYA GG+L
Sbjct: 62 PSSIQRAAVPQVLQGQNIALAASTGSGKTLAYLLPIVQALKIQEDMGYD-----RLAKRPRVLVLVPTRELATQVLSVAKHLGHYSKFSSCCIVGGGDNGQQRRALTGVQDVCVASAGRLLKHQELGHMHLSQVTHVVIDEVDTMLMQGFGPDLQKLLKPILLSPERRENVQFIVVTATMTKAVRRLL-EDGDLPQMRTLEADDLHQALPNALHRMLNAAGQDKIEVLKDLVRGKHQKP---TLIFCNTVASCRAVTHALREETNNNFGDMDYDSDDAEGXXXXXXXASSPVRSYHGEMPSNERVEALGDFKAGDASILVCTDLAQRGLDIQDVAKVINFDFPRNPIDYLHRAGRTARAGRKGEILSLVLKRDLPLATAIERAVARGEPLDGLTNDKRDYAPGGRL 458
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A0G4F3L1_VITBC (Uncharacterized protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3L1_VITBC) HSP 1 Score: 408 bits (1049), Expect = 9.630e-128 Identity = 212/399 (53.13%), Postives = 282/399 (70.68%), Query Frame = 1
Query: 7 PSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDI--------------AQQHYKDFTR--TLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPL 1155
P+ IQR AIPQ+LSGGN+VFAA TGSGKTLAYL+P++Q LK EE G S+R+ KRPRA++L PTREL+ QVLEV + S+ K SSC V+GG+ + KQ++ L+ +D+VVGTPGR+L H + N +S+ +YVV+DEVDTML QGF DI KL +PL+ P+ + QL+F TATLTKAVR+LL ++ D P VR VE +H +LP++++ MID KG DK+ AL ++ Q+ + R TLVFCNTV SCRA + ++E +L+YHGEVP ++R +NLE F+ GQ YLVCTD+A+RGLD+ VD VVMFDFPLNPID++HR+GRT R G+KG V LL +RD VLA +++A++ G PL +LSS R DY GG+L L
Sbjct: 868 PTAIQRLAIPQVLSGGNIVFAAETGSGKTLAYLLPMMQHLKSEEL----DGRSLRRPKRPRALILSPTRELSQQVLEVLRGSSQLAKLSSCSVIGGDSFAKQKRDLSKILDVVVGTPGRVLFHWDKSNLALSEVSYVVIDEVDTMLMQGFGPDINKLLQPLITRPDT-EQPQLVFATATLTKAVRRLLDQE-DLPAVRYVEAPGLHKSLPNVRYEMIDTKGEDKLDALRELLKVRGPQRPAEGGDGQRGAGEVYRKSTLVFCNTVNSCRACQHAIQEAGFTSLAYHGEVPQEQRKANLEAFRHGQVPYLVCTDLAARGLDIAQVDQVVMFDFPLNPIDFIHRAGRTGRAGSKGSVLCLLQRRDRVLATGVQRAIRLGRPLSDLSSSRKDYEKGGRLEQL 1260
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A7S3XYE8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYE8_HETAK) HSP 1 Score: 380 bits (975), Expect = 9.780e-127 Identity = 198/348 (56.90%), Postives = 250/348 (71.84%), Query Frame = 1
Query: 169 RQTKRPRAIVLVPTRELAVQVLEVAKRLSRS-CKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYP-KVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDIAQQHYKDFTRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK 1206
R +RPRA+VLVPTRELA+QVLEV K L + +S V GG DYG+QR+ L D++V TPGRLL+H E G+F+ S+ +VV+DE+DTML QGF +I+KL + L RD Q + TATLTKAVR+ L E+ P R VE DVH +LP+L+H M+D KGRDK++ L+D+ QH + T+VFCNTVKS + + L E L+AL YHGEV DER NL RFK G+ ++LV TDIA+RGLD+PDV+HVVMFDFPLNP+DYLHRSGRTARMGA G VTS+LAKRD VLA AIE AV+ GLPLD L++ + DY G KL + GR+GK S +G++HS K
Sbjct: 6 RAAQRPRALVLVPTRELALQVLEVVKGLGHGGARVASAAVTGGGDYGQQRRVLERVQDVIVATPGRLLQHREKGHFYGSRVTHVVIDEMDTMLMQGFGPEIKKLIQTL-----DRDRCQFLLCTATLTKAVRRFLEEENYIPGPPRVVEASDVHRSLPNLRHAMVDTKGRDKVTVLLDVLFQHREK--TTIVFCNTVKSAQMLDHSLAEAGLRALCYHGEVRGDERRENLARFKRGEVRFLVATDIAARGLDVPDVEHVVMFDFPLNPVDYLHRSGRTARMGASGMVTSVLAKRDRVLAGAIEAAVRKGLPLDTLTASKRDYQEGKKLAEVVGRRGKASGQGNNHSFK 346
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A7S4LLS1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLS1_9EUGL) HSP 1 Score: 372 bits (956), Expect = 5.120e-122 Identity = 196/392 (50.00%), Postives = 271/392 (69.13%), Query Frame = 1
Query: 4 SPSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDI--AQQHYKDFTRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGK 1173
+PS IQ+ IP+++ G ++ +AA+TGSGKTLAYL+P+IQ+LK +E E R KRPRAIV VPTREL QVL V K LS K SS VVGGEDYGKQR+ L VD+VV TPGRL +H + G+F+MS+ VV+DEVDTMLTQGF D+ + P++ N +R Q+IF TAT+T+ VRK L ++ + V +E D+H +PS++HV++ KGRDKM L ++ A Q K +T++FCN++ + A + L+E + +SYH ++P +R++NLE+FK+G LVCTDI RGLD+ DVDHV++FDFP +PID+LHR+GRTARMG G VTS++ K++ LA AI+ A++ LPLD L++ DY GG+L + GRK K
Sbjct: 85 TPSPIQQMVIPRLMRGESLAYAATTGSGKTLAYLLPVIQELKAQELAGVE-----RLPKRPRAIVFVPTRELGQQVLSVLKALSHHAKISSTLVVGGEDYGKQRRALDRPVDVVVATPGRLREHWKKGHFYMSEVKEVVIDEVDTMLTQGFTGDVMQFLNPIILNDDR--DLQVIFATATMTRPVRKFL-QESKFADVEILEAADLHRVVPSMRHVIVQTKGRDKMDVLEEVLNANQMMK---KTMIFCNSLAAVHAVDNTLQEFGVDVVSYHKDLPVGDRAANLEKFKSGAVSTLVCTDIGQRGLDI-DVDHVILFDFPRSPIDFLHRAGRTARMGKTGTVTSIIHKKEYTLARAIDFAIKKDLPLDGLTTNPNDYKDGGRLAAIVGRKPK 464
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Match: A0A7S1I2D0_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I2D0_9EUGL) HSP 1 Score: 362 bits (929), Expect = 4.680e-117 Identity = 193/393 (49.11%), Postives = 260/393 (66.16%), Query Frame = 1
Query: 7 PSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDTAQLIFVTATLTKAVRKLLGEDGDYPKVRQVETRDVHHTLPSLKHVMIDIKGRDKMSALIDIAQQHYKDFTRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVK 1185
PS IQ+ +P +L ++ FAA+TGSGKTLAYL+PLIQ LK + E R+ +RPRAI+ VPTRELA QV+ V K LS K SS VVGG G QR+ LAG VDIVV TPGRL AG FF+S+ +VV+DEVDTMLTQGF A+I +L +P+L N+ Q+ +AT+T+ V+ E + P +E D H + ++ M++ KGRDK+ L ++ Q F +T++FCNT+ S RA + E D+ LSYH E+P ERS+N++ F+ G+ L+CTDI RGLD+ DVDHV++FDFPLNP+DYLHR+GRTARMG KG VTSL+ +++ LA AI+ ++Q GLPL+ L+S DY GG+L + G+K K S K
Sbjct: 153 PSPIQKAVLPSLLLRRSIAFAATTGSGKTLAYLLPLIQLLKEGDLLGAE-----RKPQRPRAIIFVPTRELAEQVIGVTKSLSHYAKLSSTMVVGGGSAGNQRRALAGPVDIVVATPGRLKDLWRAGAFFVSEVQHVVIDEVDTMLTQGFTAEIMQLVKPVL---NKNPELQVTMASATMTRKVKAFF-ESSELPPFETIEASDTHRVVSTMTQNMVETKGRDKIDVLREVLQ--INRFKKTMIFCNTLDSVRAITHAMTENDIDVLSYHKELPPGERSANVKAFREGKVPILLCTDIGQRGLDI-DVDHVILFDFPLNPVDYLHRAGRTARMGKKGIVTSLINRKEYTLARAIDMSIQQGLPLEGLTSNPNDYKEGGRLAHIVGKKSKASFK 533 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9577.21187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9577.21187.1 >prot_Ecto-sp13_S_contig9577.21187.1 ID=prot_Ecto-sp13_S_contig9577.21187.1|Name=mRNA_Ecto-sp13_S_contig9577.21187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=402bp DSPSKIQRKAIPQILSGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEback to top mRNA from alignment at Ecto-sp13_S_contig9577:360..6258- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9577.21187.1 ID=mRNA_Ecto-sp13_S_contig9577.21187.1|Name=mRNA_Ecto-sp13_S_contig9577.21187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5899bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9577:360..6258- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9577:360..6258- >mRNA_Ecto-sp13_S_contig9577.21187.1 ID=mRNA_Ecto-sp13_S_contig9577.21187.1|Name=mRNA_Ecto-sp13_S_contig9577.21187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1206bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9577:360..6258- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |