mRNA_Ecto-sp13_S_contig957.21182.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig957.21182.1
Unique NamemRNA_Ecto-sp13_S_contig957.21182.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: D7FPY6_ECTSI (V-type proton ATPase subunit a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY6_ECTSI)

HSP 1 Score: 665 bits (1716), Expect = 3.120e-226
Identity = 340/344 (98.84%), Postives = 343/344 (99.71%), Query Frame = 1
Query:    1 AWHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEAPVM 1032
            AWHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMI+LIFMKWSIDWDYRM+TATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPG VDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKV+NGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEAPVM
Sbjct:  632 AWHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMIVLIFMKWSIDWDYRMYTATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGTVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVDNGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEAPVM 975          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A6H5L5K7_9PHAE (V-type proton ATPase subunit a n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K7_9PHAE)

HSP 1 Score: 507 bits (1305), Expect = 1.340e-174
Identity = 259/262 (98.85%), Postives = 259/262 (98.85%), Query Frame = 1
Query:  193 YMILLIFMKWSIDWDYRMFTATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADG 978
            YMILLIFMKWSIDWDYRMFTATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPG VDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEH SSDKVENGGHGAAGGD GGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADG
Sbjct:    4 YMILLIFMKWSIDWDYRMFTATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGVVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHKSSDKVENGGHGAAGGDSGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADG 265          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A7S2FQ72_9STRA (V-type proton ATPase subunit a n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FQ72_9STRA)

HSP 1 Score: 442 bits (1136), Expect = 6.200e-147
Identity = 230/346 (66.47%), Postives = 270/346 (78.03%), Query Frame = 1
Query:    1 AWHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATCFDGLT--PQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSS---DKVENGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEA 1023
            AWHI+ NELLFFNSMKMK+SVI+GV QM  G+ L+ MNA+YF E LDF++EF+PM +F   LFGYMI++IF+KWSIDW +RM+  TC +     P       D   AD+CPLDYGG+GDGCQPPNLIT+LINIAL+PG VDEP+YAGQ +VQT++LL A GS+PVLLL KP  I  +MK+   +H+S S  +    GE          E GGHG  G DH   EEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAH+ELA VFWEK ML+TI+MGN  AIF+G+++FAGVTF V+LCMDVLECFLHALRLHWVEFQ KFYKADGYKF PFS+  I+KEA
Sbjct:   63 AWHISENELLFFNSMKMKSSVIIGVMQMCVGICLRGMNAVYFGEWLDFYFEFLPMCVFAFGLFGYMIVVIFVKWSIDWQHRMYQGTCNEDNAHWPDCFDNPDDYELADLCPLDYGGTGDGCQPPNLITTLINIALAPGSVDEPLYAGQATVQTVILLAAFGSVPVLLLGKPYFISRQMKQ---KHESDSRVALTSGGEFGDEYHKGLEEEGGHGEGGDDH---EEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHSELATVFWEKAMLSTIEMGNPVAIFVGYSVFAGVTFAVLLCMDVLECFLHALRLHWVEFQNKFYKADGYKFQPFSLKPILKEA 402          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A835ZAQ4_9STRA (V-type proton ATPase subunit a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ4_9STRA)

HSP 1 Score: 434 bits (1116), Expect = 4.310e-137
Identity = 228/361 (63.16%), Postives = 269/361 (74.52%), Query Frame = 1
Query:    1 AWHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATCFD-GLTPQ-------------NVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGDH---GGHEE-HDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEAPV 1029
            +WH+A NELLF+NSMKMK SVILG+ QMT G++LKAMNA YFK+ LDF+ EF+PMIIF  +LFGYM+LLIFMKW I+W  RM+ ATC D G TPQ             N++  S    A+MCPL+YGG+GDGCQPPNLIT+LINIAL+PG VD+PMY GQ  VQT LLL+A   IPVLL  KP  ++    +   R DSF+S+S+L+ G          G H    GD    GGH++ H F E++IHQAIETIEFVLGMVSNTASYLRLWALSLAHTELA VFWEK MLTTI+M N  A+F GFA+F  VTFGV+LCMDVLECFLHALRLHWVEFQ KFYKADGYKF PFS   +++ AP+
Sbjct:  581 SWHVAENELLFYNSMKMKMSVILGILQMTMGIILKAMNAKYFKQPLDFYLEFVPMIIFDGALFGYMVLLIFMKWGINWQERMYMATCLDTGFTPQGDACVLGVSTTGENLSSASKYVAAEMCPLNYGGTGDGCQPPNLITTLINIALAPGTVDDPMYKGQGGVQTFLLLVAFFCIPVLLFGKPYMLKKMETQRHTRQDSFASDSELVPGA---------GAHANNAGDAHAAGGHDDSHSFGEVIIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELATVFWEKAMLTTIEMNNPIAVFCGFAVFMSVTFGVLLCMDVLECFLHALRLHWVEFQNKFYKADGYKFQPFSFHTVLENAPI 932          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A7S2G7U3_9STRA (V-type proton ATPase subunit a n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7U3_9STRA)

HSP 1 Score: 429 bits (1102), Expect = 1.490e-135
Identity = 222/341 (65.10%), Postives = 264/341 (77.42%), Query Frame = 1
Query:    1 AWHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATCFDGLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEA 1023
            AWHI+ NEL+FFNSMKMK SVILG+TQMT G++LK +NAL+F ESLDFF+EFIPM+IF ++ FGYM+LLIFMKW+I+WD RM++ATC +  +      D   TTAD+CPLDYGGSGDGCQPPNLIT+L+N+AL PG VDEP+Y GQ  +Q  LLL+A+  +PV+L+AKPL +R+          SFS +  +   +H   DK             GGHEEHDF+EIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTT+  GN  AIFIG+A+FA VT  V+L MDVLECFLHALRLHWVEFQ KFYKADG+KF P S  +I+  A
Sbjct:  559 AWHISTNELIFFNSMKMKISVILGITQMTLGIILKGINALFFSESLDFFFEFIPMLIFDIAFFGYMVLLIFMKWTINWDERMYSATCTEDHSLYPDCLDGTYTTADLCPLDYGGSGDGCQPPNLITTLMNMALQPGTVDEPLYEGQAGIQVALLLIAVACVPVILVAKPLFLRNAHSDQGGP-GSFSEQQLIDEDKH---DKA------------GGHEEHDFTEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTVNTGNPIAIFIGYAIFAAVTGAVLLGMDVLECFLHALRLHWVEFQNKFYKADGFKFKPLSFRSILHAA 883          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A7S3DTC9_9STRA (V-type proton ATPase subunit a n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DTC9_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 1.400e-130
Identity = 217/363 (59.78%), Postives = 253/363 (69.70%), Query Frame = 1
Query:    4 WHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATCFD-----------------------GLTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEA 1023
            WH+  NELLFFNS KMK SV+ G+ QM  G  LK +NA+YFKE LDF YEFIPM++F  S+F YM+ LIF KW+I+W  RM +ATC +                       G TP  + CD    TAD CPLD+GG GDGCQPPNLIT+LINIAL+PG VDEPMY GQ  +Q ILLL A  S+PVLLLAKP  + S+ + A  +H S               D  E+G   AAG DH   EEH F EIVIHQAIETIEFVLGMVSNTASYLRLWALSLAH+ELA VFWEK ML+T+ + N FA FIG+ +FAGVTFGV+L MDVLECFLHALRLHWVEFQ KF+KADG +FAP+S   I+K+A
Sbjct:   17 WHVTSNELLFFNSFKMKLSVVFGIIQMFSGTCLKGLNAIYFKEPLDFLYEFIPMVVFAASMFIYMVFLIFYKWAINWHSRMLSATCVNPYSDTWGSSAYDGEWVQCNDNGYGCTPWGLVCDGSENTADKCPLDFGGDGDGCQPPNLITTLINIALNPGVVDEPMYGGQGQIQNILLLCAFVSVPVLLLAKPYFL-SKQQHAPIQHHS---------------DDAEDGQ--AAGDDHD--EEHGFGEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHSELATVFWEKAMLSTLNI-NWFAAFIGYGVFAGVTFGVLLMMDVLECFLHALRLHWVEFQNKFFKADGIRFAPYSFKQIIKDA 358          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A7S2RLT6_9STRA (V-type proton ATPase subunit a n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLT6_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 1.980e-129
Identity = 221/342 (64.62%), Postives = 262/342 (76.61%), Query Frame = 1
Query:    1 AWHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATCFDGLT--PQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGDHG-GHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVK 1017
            AWHI+ NELLFFNS+KMK SV+LG+ QMT G+ LK +NALYFKE+LDF+ EFIPMIIF ++ FGYM+LLIFMKWSIDW+ RM+ ATC +     P      SD T AD+CPL++GGS  GCQPPNLIT+L+N+AL PG+V EPMY GQ+ +Q +LLLLA  S+PVLL  KPL + S+ + A A H + +S     A EH   D +E  GH      HG G  +HDFSEI+IHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEK ML TI M N  AI +G+++FA VTF V+L MDVLECFLHALRLHWVEFQ KFYKADG+ F PF +A I+K
Sbjct:  556 AWHISSNELLFFNSLKMKLSVVLGIVQMTLGIFLKGLNALYFKENLDFYLEFIPMIIFDMAFFGYMVLLIFMKWSIDWNQRMYMATCNEDNDHFPACAENPSDYTVADLCPLNFGGSTGGCQPPNLITTLMNMALMPGNVAEPMYPGQSQIQLLLLLLAGASVPVLLCGKPLML-SQAQHAEAGHTAAASAPPAHAEEH---DLIERKGHA-----HGEGQAQHDFSEIMIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKAMLATINMNNPVAILVGYSVFAAVTFAVLLAMDVLECFLHALRLHWVEFQNKFYKADGHNFQPFHLAPILK 888          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A7R9ZT41_9STRA (V-type proton ATPase subunit a n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZT41_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 3.160e-129
Identity = 214/364 (58.79%), Postives = 255/364 (70.05%), Query Frame = 1
Query:    4 WHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATCFDGLT------------------------PQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEA 1023
            WHIA NELLFFNS KMK SVI G+ QM  G  LK +NA+YF E LD +YEF+PM +F  SLF YM++LIFMKWSIDW++RM +A+C D  +                        P   TC  +  TA  CPLDYGGSGDGCQPPNLIT+LINIAL PG+VDEPMY GQ ++Q  LLLLA GS+P+LLLAKP  +  +       HD            H+ +D+ ENG     GG+HG      F EI+IHQAIETIEFVLGMVSNTASYLRLWALSLAH+ELA VFWEK ML+T+ + N FA +IGF +FAGVTFGV+L MDVLECFLHALRLHWVEFQ+KF+KADG +FAP+S   ++K+A
Sbjct:    1 WHIASNELLFFNSFKMKLSVIFGIIQMFAGTCLKGLNAIYFGEKLDLYYEFVPMAVFASSLFVYMVVLIFMKWSIDWNHRMLSASCVDPNSDTWGSPDYNGDWGQCSGDGDGTCLPTGETCYGNEDTAAKCPLDYGGSGDGCQPPNLITTLINIALQPGNVDEPMYGGQATIQNFLLLLAFGSVPILLLAKPYFMSQQ------GHDEV----------HHHNDE-ENGEDAEEGGEHG------FGEILIHQAIETIEFVLGMVSNTASYLRLWALSLAHSELATVFWEKAMLSTLNI-NFFASYIGFGVFAGVTFGVLLMMDVLECFLHALRLHWVEFQSKFFKADGVRFAPYSFKQVIKDA 340          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A482SCZ1_9ARCH (V-type ATP synthase subunit I n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCZ1_9ARCH)

HSP 1 Score: 397 bits (1021), Expect = 1.050e-124
Identity = 216/370 (58.38%), Postives = 257/370 (69.46%), Query Frame = 1
Query:    1 AWHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATC-------------FDGLTP----QNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGG------------DHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEA 1023
            AW ++GNELLF+NSMKMK SVILG+ QMT G++L+ +NA YF+ +LD   EF+PMI+F LSLFGYM++LIF+KWSI+WD RM   +C              D +T       V CD ++  AD+CPLDYGG+GDGCQPPNLIT+LINIAL PG VDEPMYAGQ  VQT LLL+A   +P LL  KP  +R +        D  +     + G H+     E GGH  A G            DHG   E +F EI IHQAIETIEFVLGMVSNTASYLRLWALSLAHTELA VFWEK M+++I+  N  AIFIG+A+FA VTFGV+L MDVLECFLHALRLHWVEFQ KFYKADGY+F PF   AI+ +A
Sbjct:  415 AWKLSGNELLFYNSMKMKMSVILGIFQMTCGILLRGINAWYFRSTLDLLTEFLPMILFCLSLFGYMVVLIFVKWSINWDNRMALGSCRYDESGVLGACTLSDDVTTCYNVNGVPCDKNTLLADVCPLDYGGTGDGCQPPNLITTLINIALQPGTVDEPMYAGQAGVQTFLLLVAFICVPWLLFVKPFYLRHQHNSQKHNEDKSNPVENPLLGGHD-----EEGGHAVAAGGXXXXXXXXXXXDHGHGGEFNFGEIFIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELALVFWEKAMISSIETNNPVAIFIGYAIFAAVTFGVLLAMDVLECFLHALRLHWVEFQNKFYKADGYRFQPFDFKAILGKA 779          
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Match: A0A448ZBJ5_9STRA (V-type proton ATPase subunit a n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZBJ5_9STRA)

HSP 1 Score: 397 bits (1020), Expect = 1.380e-123
Identity = 212/359 (59.05%), Postives = 249/359 (69.36%), Query Frame = 1
Query:    4 WHIAGNELLFFNSMKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFGYMILLIFMKWSIDWDYRMFTATCFDG-------------------LTPQNVTCDSDSTTADMCPLDYGGSGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVLLLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGDHGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAVFWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHWVEFQTKFYKADGYKFAPFSIAAIVKEA 1023
            WH+  NELLFFNS KMK SVI G+ QM FG VLK  NA+YF E LD + E +PM++F  SLF YM++LIFMKWSIDW+ RM  ATCFD                     TP   +C    TTAD CPLDYGGSGDGCQPPNLITSLINIAL+PGDVDEP+YAGQ  VQ  LLLLALGS+PVLLLAKP  ++ + ++    H +   +                          G  EEH F EI+IHQAIETIEFVLGMVSNTASYLRLWALSLAH+ELA VFWEK ML+T+ + N FA ++GF +FA VTFGV+L MDVLECFLHALRLHWVEFQ+KFYKADG +F+P+S   I+ ++
Sbjct:  539 WHVTSNELLFFNSFKMKLSVIFGIFQMFFGTVLKGCNAIYFGEKLDLYLEVLPMVVFAASLFIYMVVLIFMKWSIDWNERMLLATCFDPDGDYWNADWTVCDQSGNGYCTPWGYSCTDYDTTADKCPLDYGGSGDGCQPPNLITSLINIALAPGDVDEPLYAGQAGVQNFLLLLALGSVPVLLLAKPYMLKKQHEQTHHEHIAEMPD--------------------------GDEEEHGFGEILIHQAIETIEFVLGMVSNTASYLRLWALSLAHSELATVFWEKCMLSTLGV-NWFATYLGFGLFAAVTFGVLLMMDVLECFLHALRLHWVEFQSKFYKADGIRFSPYSFKQIIIDS 870          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig957.21182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY6_ECTSI3.120e-22698.84V-type proton ATPase subunit a n=1 Tax=Ectocarpus ... [more]
A0A6H5L5K7_9PHAE1.340e-17498.85V-type proton ATPase subunit a n=1 Tax=Ectocarpus ... [more]
A0A7S2FQ72_9STRA6.200e-14766.47V-type proton ATPase subunit a n=1 Tax=Florenciell... [more]
A0A835ZAQ4_9STRA4.310e-13763.16V-type proton ATPase subunit a n=1 Tax=Tribonema m... [more]
A0A7S2G7U3_9STRA1.490e-13565.10V-type proton ATPase subunit a n=1 Tax=Dictyocha s... [more]
A0A7S3DTC9_9STRA1.400e-13059.78V-type proton ATPase subunit a n=1 Tax=Amphiprora ... [more]
A0A7S2RLT6_9STRA1.980e-12964.62V-type proton ATPase subunit a n=2 Tax=Rhizochromu... [more]
A0A7R9ZT41_9STRA3.160e-12958.79V-type proton ATPase subunit a n=1 Tax=Craspedosta... [more]
A0A482SCZ1_9ARCH1.050e-12458.38V-type ATP synthase subunit I n=1 Tax=archaeon Tax... [more]
A0A448ZBJ5_9STRA1.380e-12359.05V-type proton ATPase subunit a n=2 Tax=Pseudo-nitz... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig957contigEcto-sp13_S_contig957:15199..20235 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score633.6
Seed ortholog evalue5e-179
Seed eggNOG ortholog2880.D7FPY6
Model size2030
KEGG koko:K02154
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04721,ko04966,ko05110,ko05120,ko05152,ko05165,ko05323,map00190,map01100,map04142,map04145,map04721,map04966,map05110,map05120,map05152,map05165,map05323
KEGG ModuleM00160
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.vacuolar proton-transporting V-type ATPase complex assembly
EggNOG OGsCOG1269@1,KOG2189@2759
Cds size993
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig957.21182.1prot_Ecto-sp13_S_contig957.21182.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig957 16194..19727 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464222.2908678-UTR-Ecto-sp13_S_contig957:15198..161931681464222.2908678-UTR-Ecto-sp13_S_contig957:15198..16193Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig957 15199..16193 -
1681464222.373108-UTR-Ecto-sp13_S_contig957:19727..197451681464222.373108-UTR-Ecto-sp13_S_contig957:19727..19745Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig957 19728..19745 -
1681464222.3838944-UTR-Ecto-sp13_S_contig957:20211..202351681464222.3838944-UTR-Ecto-sp13_S_contig957:20211..20235Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig957 20212..20235 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464222.3057392-CDS-Ecto-sp13_S_contig957:16193..162511681464222.3057392-CDS-Ecto-sp13_S_contig957:16193..16251Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig957 16194..16251 -
1681464222.317103-CDS-Ecto-sp13_S_contig957:17073..173601681464222.317103-CDS-Ecto-sp13_S_contig957:17073..17360Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig957 17074..17360 -
1681464222.3280878-CDS-Ecto-sp13_S_contig957:17700..179401681464222.3280878-CDS-Ecto-sp13_S_contig957:17700..17940Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig957 17701..17940 -
1681464222.344052-CDS-Ecto-sp13_S_contig957:18715..189741681464222.344052-CDS-Ecto-sp13_S_contig957:18715..18974Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig957 18716..18974 -
1681464222.3561668-CDS-Ecto-sp13_S_contig957:19578..197271681464222.3561668-CDS-Ecto-sp13_S_contig957:19578..19727Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig957 19579..19727 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig957.21182.1

>prot_Ecto-sp13_S_contig957.21182.1 ID=prot_Ecto-sp13_S_contig957.21182.1|Name=mRNA_Ecto-sp13_S_contig957.21182.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=331bp
MKMKTSVILGVTQMTFGVVLKAMNALYFKESLDFFYEFIPMIIFVLSLFG
YMILLIFMKWSIDWDYRMFTATCFDGLTPQNVTCDSDSTTADMCPLDYGG
SGDGCQPPNLITSLINIALSPGDVDEPMYAGQTSVQTILLLLALGSIPVL
LLAKPLTIRSRMKKAAARHDSFSSESQLMAGEHNSSDKVENGGHGAAGGD
HGGHEEHDFSEIVIHQAIETIEFVLGMVSNTASYLRLWALSLAHTELAAV
FWEKTMLTTIQMGNAFAIFIGFAMFAGVTFGVILCMDVLECFLHALRLHW
VEFQTKFYKADGYKFAPFSIAAIVKEAPVM*
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mRNA from alignment at Ecto-sp13_S_contig957:15199..20235-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig957.21182.1 ID=mRNA_Ecto-sp13_S_contig957.21182.1|Name=mRNA_Ecto-sp13_S_contig957.21182.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5037bp|location=Sequence derived from alignment at Ecto-sp13_S_contig957:15199..20235- (Ectocarpus species13 EcNAP12_S_4_19m)
GCTTGGCACATCGCCGGAAATGAGGTAAGACGTGGACAATATGTGACATA TGCCACGGTATACCATGGTATATTTAGTTCGTCCCATTTGTTCTGGTCAC CAGTCCTTACACCGTACTGTACAATCCTGGGCGAGGTTGTTTGTAGCAAG AGAAACACATCCCGCTCTACACACCGCTACATACAGCATCATATCATCCC ATTCGCCATTGCTGATATTTAGTCGAGATGTGCCGCGTTCGTGAAAAATG CGCAGCGTTTGTCAAAGTGCCACTCCGCGGTGGTCGTATGCGGTGTGACG TAAAGATGTGTCTGCTGGCAACGTCTGCTTTGAAAGTTTGCGGTGTACCG TGCTTTCTAGACGAGCGCTCCCCTGTTGCGTGAGATGTCTTGCGTCTGCT TTGAAAGTTTTGACATCGACTTCGTCTGCTACCCCGACTTGACAGCTTGT GTGCTTGTCTTTTGCCTCCCATCTATTTCTTTCTTCGCAGCTGCTCTTCT TCAACTCGATGAAGATGAAGACTTCGGTGATCCTGGGCGTAACCCAAATG ACGTTTGGTGTCGTCCTCAAGGCGATGAACGCGCTGTACTTCAAGGAGTC CCTCGACTTTTTCTACGAATTCATCCCCATGATCATCTTCGTCCTGTCCC TCTTCGGGTAGGCCTTGTGATTTTTTTTTCATGAGCCTTGTACTCCCCCC CCCCCCACGAGCCTCACTACTTTTGCGGCGGGTGCCTTTAAACACCAATA TTCTCTCTCTCTTCTTTTTCGGNNNNNNNNNTCTGTCCTGGCTTTGCAGG GATGCGAGGTCAATGGTCTAACGACTACGGCATGCACGACTATCAGCACA CACACACATGCACACACACAAGTTTAGTTTTGTTGTCTCGTGTTTTCATT TTTATTTTTTGGGTTCTCCTTTTTTTATCTGTTCGTTAGGCAGGTGTTTT TCGTGTGTTTTCTTTCTCGAGATTGTCGCGGCTGTTGATGGACAATATGC GGCAAAGCTGATTGTTGTCCATGGCGGTGAATAGTGGTGATGGTGTTGTG TTGTTGAACGTCTTCTTTGATCTTTCAGGCGCTCGTTTGTCCCCTTGACC CTTAACCCCTCCCCTCTCCACTAAGTCCTCATTGATGTTCCAGATCGCAT GAGACGAACTTTGCTTGTCCCCCATCTCACCGCTTCTTCCATGCATTCTT CCACTAACGGTGCCTTTTTTTTCCGCGACTGAATTACTATAATAATTTAA AAAATGAACAGGTACATGATCCTCTTGATCTTCATGAAGTGGTCCATCGA CTGGGACTACCGCATGTTCACCGCCACGTGCTTCGACGGGCTCACGCCTC AGAACGTCACGTGCGACTCCGATAGTACCACCGCCGACATGTGCCCCCTG GACTACGGGGGAAGCGGCGACGGTTGCCAGCCGCCCAACCTTATAACGAG CCTCATCAACATCGCGCTGTCGCCGGGTGATGTCGACGAGCCAATGTACG CGGGGCAGACCAGCGTTCAGGTATGTGTGTACCGTATGTTCAGGACCTCT GTCCGGAGTGGGTGTATATCTCGCACCTTCGGCGGCTGTTGTCTGATGTC ATCGCCGATGAGCCCGGATTGCAATGTGTAAATGCTTACATAAGGGACAA GAGGAATGTATGTACTTGTAAGGAAAATGTACATCTTGCAAGTCATACAA ATATTTTCACCAGTGCCATGGGGCCTAAAGTGGATCCAAAGGTGGTCGAT GATAGTCGTGGTCGTGTTTTTCGTCGGATGGACTCTAGCTCAATGGGGAA GTGCGAGGCATCCGTTTCGACAAAGCTCATTACGGCCGGTGCTGCTCGTT GTTCACGACTCCTTTCGTTTGTCTGCCGTTCTTTCTTTCTCTCACTATCC TGCTTGATTTCATTCGGTTTTCTTGCCGGCGTCGTTGGCCGTTGTTCCGG CTTGTATGTCTCTCCAGGTTATGATATCGTGCCGCGTCGTCTGGTGCTAT TACAGCGCTTTGCTTTGTTTCACCTCCCCATCTCTCAGCGATCTCCCACT TGAGTGCAGAAAAAAATGTGCTTTGCTGGCATTTCCTAGTCTTTTCTTTT TTATCACACATCCCGTCCGTTCAAGATCTCGCACGAAGCCGTCCCGACGC CCTGCCAGATATCACCGCAGAGAATGCCCCACTCTGATTTCGGTACACAC GGCCCGCACGCACGCACCAAGAGTTAATGATTTTCCTCGTACACCTTCGC TTCCTCCGTCAATTTCTGTCGTGTCCCTTGTTTTTTTTTTTCTAGACGAT TCTCCTTCTCCTAGCCTTGGGGTCCATCCCCGTTCTCCTCCTGGCCAAGC CCCTCACGATCCGCAGCCGCATGAAGAAGGCCGCCGCCAGGCACGACAGC TTTAGCTCGGAGAGCCAGCTCATGGCCGGGGAGCACAACTCGTCGGACAA GGTTGAAAACGGCGGGCACGGTGCCGCGGGCGGAGATCACGGTGGGCACG AGGAGCACGACTTCTCCGAGATCGTTATTCACCAGGTACATGTGTAAGCG CGAAGGGTTTTGTTCTCATTCGCGTAGATGAGCATTAATATTATGATGAA TGTTAGCATATTTTTTGTTTTGGGGCCGATCCCTGGGGGATGACTTACCT TCCGTAGATGTGAGATGATGCCTTCCAAAGGTGCGAGATATTGCCTTGCG TAGGTGTGGAGATGTTGCCTCGCGTACATGTGGATGGTTCCCCTTGTTTA ACAGTAGTATGGGTGGGGTAGGGGGCGACGGACGAAGAGGGTCTGAACCG GAAAACTTTGCTATCACACGATGTTTTTCGCCGCGCGCACCACCTTCTAT GGTAAACCAAAATCCTGTTTTGAAGGCCATCGAGACGATCGAGTTCGTGC TCGGGATGGTCTCGAACACTGCCTCGTACCTCCGGCTGTGGGCGCTGTCG CTGGCGCACACGGAGCTCGCGGCGGTGTTCTGGGAGAAGACGATGCTCAC CACTATCCAGATGGGCAACGCCTTCGCCATCTTCATCGGCTTCGCGATGT TCGCCGGGGTTACCTTTGGCGTCATCCTGTGCATGGACGTGCTGGAGTGC TTCCTGCACGCCCTCCGGCTGCACTGGGTGGAGTTCCAGACCAAGTTCTA CAAGGCCGACGGGTGAGAAAGTTGGATTTTTTTTTTCTCGCTCTTGGAGA GACCTGTTTCGCTCCTCTGTCGTGTTTGCGGGGATGTCCGGGATCAATTC GACGTGGGAGCCTGTCTGTCTTTATTTCGTGTTTCATTTTGGAAACGACT GCCATCGGCGTGCTCAAACTGAACCCCATATGTGATGTGCTAGTGCATTG GCTATAGTTCAATGCATAGACGGGTGATTGCCGCTTGGGGTGTCACCCCT TGCACCCTGACCGGTAGACTGGAAGGAACTGTTGACTGTATTGCTTTGCC ATGTTGGGTTTCTTGATCAGGGCGGGGTGCCACTTATAATAGGTAGGTGG GTCTCTGTTGTTGCGATGTGAAGTGAGTAAGTATTTTTTTTCGGCACGTG TAGGTGGTTCTGCGTTTTACAAAGTGTTATTTGTACACGGCAAGTGCGGC AGGTCCAGACGCCGCCAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT TCTCACATGAGCTCTATAGTCCACTCCAATGTTTCCTGAAGCCGACGAGT TCACTGGGTGTGTGTATTTGTTTGTTTGTGGTTCGCCGACTGTCTTTCGT TCCGCCTTTGTGCGTCCGTGACGCCCTTGGGAACATTTTATGTTCGTCTC TCTCTCTACCTCCCGCCCTCTCTGTCTCTCTCTTCCTCTTTCTCTGCATG TCCGTCTATCTTGCCGCCGTCGCCTTGCTGGTCACACACGTAACCTTGAC TGGCTTACACCCGTCGCGAACTCGCCCTGTGTTTCGCCTGTTCCTCCCGG CCCCCGCGATCGTCCAAACCAACACGACACGCAGGTACAAGTTCGCTCCA TTCTCCATTGCTGCTATTGTGAAGGAGGCGCCTGTGATGTAGTTCAGTTA GTAGCCACACACGCCGTGTTGTCTTGTGTTTCCGATCATGAGATCAAAGA AAAATGGGGGGTGGGGGTCGTGGACAGAGTCTGTGTTAGTGTAACAACAT AGCTTTGAAGAGCGGAGAGAAGTTGTAGTAGGGGGACGAACGCCCACGTT GTACTAGTCGTCTAAGGGGTGTAGAGGGAGAAAGACGACGAGCAGCAGCA GCAGGAGGAGGGGAGTCAAGATGGAGGAGATGCGCTGCCTGCTTGTTGGC GAGAACGAGTCCAGGTGTGTGGCGGTCGCGAGCATGCAATCTGGGAGGTG GCGCAGCACCCCACTTACGCGGGCCTTGTTTTGTTGCGCCCCCGAACCAG ACGTGCGCGGAGGGCGGTCAAGAACGGAGCCCTGTTGCGGGGTGTCTGTC TCGTTTACTGCTGAGGCATGACAAGAACTGCCGTTTGTGGTGGAGACTTT GAACGCGGGGTGAAATGACGAGGATAGTTTTGTATGTCGTATGCATAGGC TTTGATATGGCCCCCAAGAAGTACGCGATTCGTTCTTTGTGCACGATTCT GCATCGCGAGTTTGGGGATGTGGGGAACGATTTCTGCGAGATTCCCCCAT TTTGTTGACGTTCGGAGCTCGAGGATGCTTAAATGTATTTCGACCGCTAG CGAGTTGTTGTTCCGGTTGTTGTTCCTTGGGCAACTAATTGCTACGTTGT AACGCAAAGGAGAAACGGCGACGACTTTTGTAGACGTTCATTTCGTCTAC CCTTGGGAGACACTATCGGTGCCTTAATCAATTTCGTGGAAACTTTCAAA CTTTGCTCCGTAGACTACATGTTCGACACGTGCGTCCCATTTTTATCTAG TCTACCATCTGACTTGTCGGGTAACAAAGTGACAGGGGTTGTCAAGCACA TAAATCTGTCCAGTCGTACATGTCCACCCCTCTCCATGTTTCGACATCTT GCTCTTGTACCTCTCTTTGGCCGGACCGCGATACTCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig957:15199..20235-

>mRNA_Ecto-sp13_S_contig957.21182.1 ID=mRNA_Ecto-sp13_S_contig957.21182.1|Name=mRNA_Ecto-sp13_S_contig957.21182.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=993bp|location=Sequence derived from alignment at Ecto-sp13_S_contig957:15199..20235- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATGAAGACTTCGGTGATCCTGGGCGTAACCCAAATGACGTTTGG
TGTCGTCCTCAAGGCGATGAACGCGCTGTACTTCAAGGAGTCCCTCGACT
TTTTCTACGAATTCATCCCCATGATCATCTTCGTCCTGTCCCTCTTCGGG
TACATGATCCTCTTGATCTTCATGAAGTGGTCCATCGACTGGGACTACCG
CATGTTCACCGCCACGTGCTTCGACGGGCTCACGCCTCAGAACGTCACGT
GCGACTCCGATAGTACCACCGCCGACATGTGCCCCCTGGACTACGGGGGA
AGCGGCGACGGTTGCCAGCCGCCCAACCTTATAACGAGCCTCATCAACAT
CGCGCTGTCGCCGGGTGATGTCGACGAGCCAATGTACGCGGGGCAGACCA
GCGTTCAGACGATTCTCCTTCTCCTAGCCTTGGGGTCCATCCCCGTTCTC
CTCCTGGCCAAGCCCCTCACGATCCGCAGCCGCATGAAGAAGGCCGCCGC
CAGGCACGACAGCTTTAGCTCGGAGAGCCAGCTCATGGCCGGGGAGCACA
ACTCGTCGGACAAGGTTGAAAACGGCGGGCACGGTGCCGCGGGCGGAGAT
CACGGTGGGCACGAGGAGCACGACTTCTCCGAGATCGTTATTCACCAGGC
CATCGAGACGATCGAGTTCGTGCTCGGGATGGTCTCGAACACTGCCTCGT
ACCTCCGGCTGTGGGCGCTGTCGCTGGCGCACACGGAGCTCGCGGCGGTG
TTCTGGGAGAAGACGATGCTCACCACTATCCAGATGGGCAACGCCTTCGC
CATCTTCATCGGCTTCGCGATGTTCGCCGGGGTTACCTTTGGCGTCATCC
TGTGCATGGACGTGCTGGAGTGCTTCCTGCACGCCCTCCGGCTGCACTGG
GTGGAGTTCCAGACCAAGTTCTACAAGGCCGACGGGTACAAGTTCGCTCC
ATTCTCCATTGCTGCTATTGTGAAGGAGGCGCCTGTGATGTAG
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