mRNA_Ecto-sp13_S_contig9569.21178.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9569.21178.1
Unique NamemRNA_Ecto-sp13_S_contig9569.21178.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: D8LM13_ECTSI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM13_ECTSI)

HSP 1 Score: 785 bits (2026), Expect = 9.480e-279
Identity = 378/399 (94.74%), Postives = 385/399 (96.49%), Query Frame = 1
Query:    1 QEEGRHLQLQFQFRFTRDSEEVLFAFCFPYSYDDCNKDLESYEDQACLARRDGMAVQPLITPPPSSTGYFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPHLFLEHAPPSKCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPVNGGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKH 1197
            +EEGRHLQLQFQFRFTRDSEEVLFAFCFPYSYDDCNKDLE  EDQA   RRDGMA+QPL++P P  TGYFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPHLF EHAPPS+CRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDG+AAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAAR SGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPP +GGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLER   H
Sbjct:  140 EEEGRHLQLQFQFRFTRDSEEVLFAFCFPYSYDDCNKDLECCEDQA---RRDGMALQPLMSPRPGPTGYFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPHLFPEHAPPSRCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGIAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARPSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPASGGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERETSH 535          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: A0A6H5JLN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN3_9PHAE)

HSP 1 Score: 614 bits (1583), Expect = 2.530e-211
Identity = 393/494 (79.55%), Postives = 399/494 (80.77%), Query Frame = 1
Query:  511 LVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPVNGGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKHLINELRNQPSYREQSLLLRRGTSFPATPPLPTPPQ----EPGLRGKRRGSTGSVFGGSRGASPPLSGQSSNLDKAPAATITADLAGAGKSGXXXXXXXXXXXXXXXXXXXXXXXXLLPRRPVGRKKVSTSRSRSEESVRRTSSQIGGVGGVGGG-ISVVPTRRIGSGSSGSRNXXXXXXXXXXXXXXXXXXXXXRDWAKAAARRKPPSPNPGRCRSASREARRGQQSTGRSKRGNASXXXXXXXXXXXXKRGDRDXXXGGKKGVR 1977
            LVPLLNPDG+AAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAAR  GRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPP NGGRRGE FASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLER      NE                            PP+    EPGLRGKRRGSTGSVFG    ASPPLSGQSSNLDKAPAATITADLAGAGK+GXXXXXXXXXXXXXXXXXXXXXXXXLLPRRPVGRK VSTSRSRS ESV RTSSQIGG        I+VVPTRRIGSGSSGSR+XXXXXXXXXXXX         RD AKAA  RKPPS           +ARRG  STGRS      XXXXXXXXXX  KRGD D   GGK GVR
Sbjct:    2 LVPLLNPDGIAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARPLGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPANGGRRGELFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERVSIGRANE---------------------------RPPEIIELEPGLRGKRRGSTGSVFGSGSDASPPLSGQSSNLDKAPAATITADLAGAGKNGXXXXXXXXXXXXXXXXXXXXXXXXLLPRRPVGRK-VSTSRSRSGESVHRTSSQIGGXXXXXXXXITVVPTRRIGSGSSGSRSXXXXXXXXXXXXSVSCESGATRDRAKAATGRKPPSXXXXXXXXXXGKARRGPPSTGRSXXXXXXXXXXXXXXXXGGKRGDGDDSGGGKNGVR 467          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: A0A7S2RK48_9STRA (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK48_9STRA)

HSP 1 Score: 380 bits (976), Expect = 6.410e-117
Identity = 205/410 (50.00%), Postives = 272/410 (66.34%), Query Frame = 1
Query:   25 LQFQFRFTRDSEEVLFAFCFPYSYDDCNKDLESYED-QACLARRDGMAVQPLITPPPSSTGYFHRELLIRTPEGRRVDLLTVTDCNGIL--NEREPQIDPHLFLEHAPPSKCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPVNGGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKHLINELRNQPSYREQSL 1245
            L +   F    EE+ FAFC+P SY +C   L   E   A      G+A + L +    S  ++HRELL R+ +GRR+DL+T++D +G+    E EP I+ + F       + R   F  K VVF+SARVHPGETPA+FVF+G+L FLL  +DPRA  LR+ FVFKL+P+LNPDGVA GH+R D +G NLNR+Y  P  E+  ++ A+K  ++   +   G+G LTLY+DLHAHA+ RGCFIYGN + SL DQ E QL   L+ +N+ HF++  C F+ KHM RVD+ D GLSAEG+GRV   +  G+LRSYTLECNYNTGKA+ NH+    G R G    SPER  T+PP+Y PQ W +VG G L +LLD EG + WSRL  SKFR+LERAR+ + +E+R +P + +QSL
Sbjct:  175 LSWDVTFANPEEEIFFAFCYPQSYTECQNMLVDVERVHAAEPPVPGLAWK-LPSGRQDSDIFYHRELLARSLDGRRLDLVTLSDWSGLSPEGESEPHIEDYDFCFPERADRARAPLFPEKPVVFISARVHPGETPAAFVFRGVLEFLLRVDDPRAVALRKHFVFKLIPILNPDGVARGHYRMDQWGRNLNRYYTAPTAEEQPTILAAKQAIL--LSARLGKG-LTLYVDLHAHATKRGCFIYGNAMDSLTDQVECQLYAQLVAVNSAHFEYDGCVFSKKHMQRVDAVD-GLSAEGSGRVATHQGTGLLRSYTLECNYNTGKAL-NHVAAAQGDRSG--MVSPERHITSPPKYTPQEWEEVGRGLLTSLLDTEGLNPWSRLGNSKFRTLERARQAVCSEIRQKPQFSKQSL 576          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: A0A7S1CCH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCH4_9STRA)

HSP 1 Score: 325 bits (832), Expect = 3.040e-101
Identity = 166/346 (47.98%), Postives = 224/346 (64.74%), Query Frame = 1
Query:  205 YFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPHLFLEHAPPSKCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPVNGGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKHLINELRNQPSYREQS 1242
            Y+HRELL R+ +GRR+DL+T++   G+  ERE ++ P LF + A  +  R  +F  K V+F+S RVHPGETP  FV+ G+  FLL  +DPRA  +R  FVFKLVP+LNPDGVA GH+R D  G NLNR Y +P+     +++A+ +VV HH       G L LYLDLHAHA+ RGCF+YGNHLP L DQ  N +   ++TLN+P+ +FG+CNF+ K+M   D  D G+S EG GRV   +H G++  YTLECNYNTG+  CN I   +G       + P     T P+Y P+ WRDVG G   A LD   A+ WSRLP+S +R++E  R+ L   L+ +  Y+EQ+
Sbjct:    9 YYHRELLTRSLDGRRIDLVTLSSRLGLTAEREARL-PGLFPDGA--AHPRAHKFLEKKVIFISCRVHPGETPGQFVYDGLAEFLLRRDDPRARRVRDMFVFKLVPMLNPDGVARGHYRADQRGVNLNRCYKEPNPAVEPTIFAAVSVVRHHG----DAGNLWLYLDLHAHATKRGCFLYGNHLPDLHDQVTNLMYARMVTLNSPYLEFGACNFSEKNMSLKDRRDKGVSKEGAGRVALYRHTGIIHCYTLECNYNTGRE-CNQIFAADGDGERRGASPPREHRATVPKYAPEHWRDVGKGCAIAFLDMFAANPWSRLPRSTWRTMEGMRQALERGLKCESPYKEQA 346          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: A0A7S3Y6E6_HETAK (Hypothetical protein (Fragment) n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6E6_HETAK)

HSP 1 Score: 330 bits (846), Expect = 3.480e-99
Identity = 186/430 (43.26%), Postives = 243/430 (56.51%), Query Frame = 1
Query:   52 DSEEVLFAFCFPYSYDDCNKDLESYEDQACLARR-DGMAVQPLITPPPSSTGYFHRELLIRTPEGRRVDLLTVTDCNGILN--EREPQIDPHLFLEHAPPSKCRPFEFE--------------------------------GKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPVNGGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKHLINELRNQPSYRE 1236
            ++ E  FAFCFPYSY++C ++L   E++  ++   +  A    +     +  YF RE L  + EGRRVDLLT+TD +G  +  + EP I   LF +    SK RP  F                                 GK+ VFVSARVHPGETP  F F G+LR LL+P DPRA  LRRR+VF+LVP+LNPDGV  GH R D+ G NLNRHY  PD E   +++A +   MH+      R  LT Y D HAH + RGCF++GN L  +  Q +NQ +  LM LNT HF++ +C F+  HM RVD GD GL A GTGRV +    G++RSYTLEC+Y TGK +       N         S   +S  PP+Y P+ WRDVG  FL ALLD EG +  SRLP  KFR+L++ ++ +   L+  P Y E
Sbjct:  221 ENTETSFAFCFPYSYEECQEELAKIEEEYGISGSIESAADIQKVAQAKHNNIYFFREHLTNSVEGRRVDLLTITDFDGYEHCAQTEPFIHDRLFPDR---SKPRPTMFSYRGGGSNNGGVTEEGTKHGDSGSPSPNQGSGVGKETVFVSARVHPGETPGQFAFLGLLRLLLDPADPRARALRRRYVFRLVPMLNPDGVCHGHTRHDTLGQNLNRHYTAPDPETAPAIFAVREA-MHYLKE---RCALTAYFDCHAHNTKRGCFVFGNQLDGVRQQTDNQFVAQLMALNTQHFEYAACKFSKGHMYRVDPGDRGLPATGTGRVGFFLQLGLVRSYTLECSYATGKKLNQLAATTNNAH-----LSDAPQSRRPPKYLPEHWRDVGRSFLLALLDVEGRNPQSRLPNHKFRTLDQVKQSIYRTLKQDPLYSE 638          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: A0A835Z1I4_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1I4_9STRA)

HSP 1 Score: 326 bits (835), Expect = 1.130e-97
Identity = 179/356 (50.28%), Postives = 219/356 (61.52%), Query Frame = 1
Query:   64 VLFAFCFPYSYDDCNKDL------------ESYEDQACLARRDGMAVQPLITPPPSSTG-YFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPH--LFLEHAPPSKC-------------RPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSL---------EDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPVNGGRR 1020
            V FAFC+P+ Y D  + L               + +A LAR  G AV+    P PS+   Y+HRE L  + EGRR+DL+TV+DC GI   RE   + H  LF E A                  RPF+F GK VVFVSARVHPGETP+SFV QG+L FLL  +D RAA LRRR+VFK+VP+LNPDGV  GH R D+ G NLNR Y  P      +++A K ++    +R    G L +YLDLHAHA  RGCFIYGNH   +         E Q ENQL+PLLMT N+ HFD+G+CNF+LKHM RVD GD G+SAEG GRV+ G+  GV+RSYTLECNYN G+A  N +P     RR
Sbjct:   65 VSFAFCYPHGYGDLQRHLAVPTHTYLPALSHGSDTEAALARA-GAAVRSSSPPLPSAAIIYYHREALAASLEGRRLDLITVSDCTGIQPAREAYFERHHGLFPEGAADGGASPETAPEPAAVSQRPFKFAGKQVVFVSARVHPGETPSSFVLQGVLEFLLRQSDLRAAALRRRYVFKIVPMLNPDGVWRGHSRHDTLGKNLNRFYTSPCPRAQPTIFAVKKLLERLCSRADDSGPLKVYLDLHAHAVKRGCFIYGNHRDRIGGGGSAGKGEGQIENQLIPLLMTANSAHFDYGACNFSLKHMTRVDGGDGGMSAEGAGRVWCGQVGGVVRSYTLECNYNGGRAPTNRVPSAGPRRR 419          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: A0A8C5UBP3_9PASS (Tubulin-glutamate carboxypeptidase n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5UBP3_9PASS)

HSP 1 Score: 319 bits (817), Expect = 1.480e-95
Identity = 202/471 (42.89%), Postives = 262/471 (55.63%), Query Frame = 1
Query:   70 FAFCFPYSYDDCNKDLESYEDQACLARRDG--MAVQPLITPPPSSTGYFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPHLFLEHAPPSKCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHH--------------------------AARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPV--NGGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKHLINELRNQPSYREQSLLLRRGTSFPATPP---LPTPPQEPGLRGKRRGSTG-SVFGGSRGASPPL 1380
            FAFC+P+SY +C         Q  LA+ DG     + +    P  + Y+HRELL R+ +  RVDLLT+T C+G+  +REP++D  LF + + P   RP  F GK V F+S+RVHPGETP+SFVF G L F+L   DPRA  LRR FVFKL+P+LNPDGV  GH+R DS G NLNR Y+ PD E H +VY +KAV+++H                          A + SG   L  Y+DLH HAS RGCF+YGN+     DQ EN L P L++LN+PHFDF  CNF+ K+M   D  D G S EG+GRV   K  G++ SYTLECNYNTG+++ N IP    + GR     ASP      P RY  +++  VG     A LD    + W R+  S+   L   R  ++  +R   S    S   RRG + P   P   LPT   +  L   R  S G S  GGS+  SP +
Sbjct:  140 FAFCYPFSYTEC---------QDMLAQLDGRFQDCRHMSPSSPLDSVYYHRELLCRSLDNLRVDLLTITSCHGMQEKREPRLD-KLFPDTSTP---RPRCFTGKKVFFLSSRVHPGETPSSFVFNGFLDFILREEDPRAQMLRRMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLHPDAELHPAVYGAKAVLLYHHIHSRVLPGSPDWRTFEGSWSPPPPIAPKDSG---LAYYVDLHGHASKRGCFMYGNNFSDENDQVENMLFPKLISLNSPHFDFTGCNFSEKNMYARDKRD-GQSKEGSGRVAIYKALGIIHSYTLECNYNTGRSV-NSIPGACHDNGR-----ASPPPAPAFPSRYTVELFEQVGRAVAVAALDMAECNPWPRIVLSEHTCLGNLRAWMLKHVRGLRSTSGGSR--RRGGADPHLSPCSGLPTSASDNALARARSFSNGTSGSGGSQQDSPRI 585          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: A0A3Q0RES4_AMPCI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0RES4_AMPCI)

HSP 1 Score: 319 bits (817), Expect = 1.770e-95
Identity = 185/420 (44.05%), Postives = 242/420 (57.62%), Query Frame = 1
Query:   70 FAFCFPYSYDDCNKDL----ESYEDQACLARRDGMAVQPLITPPPSSTGYFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPHLFLEHAPPSKCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHA-------------ARTSGRGRLTL------------------YLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPV--NGGRRGERFASPERKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKHLINELRN 1218
            F+FC+P+SY +C + L    ESY + A L+                ST Y+HRELL  + +G RVDLLTVT+C+G+ +ERE ++ P LF +   P   RP  F GK V F+S+RVHPGETP+SFVF G L F+L  +DPRA  LR  FVFKL+P+LNPDGV  GH+R DS G NLNR Y++P  E H S+YA+K ++++H              + T G G + +                  Y+DLH HAS RGCF+YGN LP    Q EN L P L+ +N+ HFDF  CNF+ K+M   D  D G S EG+GRV   K  G+L SYTLECNYNTGK M N IPP   + GR     A+P    + PP+Y P+I+  VG     + LD    + W RL  S+   L   R  ++  +RN
Sbjct:  153 FSFCYPFSYTECQEMLQQLDESYPNAAQLS---------------PSTVYYHRELLCHSLDGNRVDLLTVTNCSGMQDEREVRL-PKLFPDTNTP---RPHRFAGKRVFFLSSRVHPGETPSSFVFNGFLNFILRRDDPRAHALRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKTLLLYHHTHNRLHKTQSSTHSNTHGAGDVAVPQVEEQESVPPQEGSVAYYVDLHGHASKRGCFMYGNSLPDESQQVENMLYPRLIAVNSAHFDFLGCNFSEKNMYARDKRD-GQSKEGSGRVAIHKAIGLLHSYTLECNYNTGKTM-NTIPPACHDNGR-----ATPPPPPSFPPKYTPEIFEQVGRAVAISALDMAECNPWPRLVLSEHTCLTNLRAWILKHVRN 546          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: W4HDC5_9STRA (Cytosolic carboxypeptidase-like protein 5 n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDC5_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.310e-94
Identity = 178/396 (44.95%), Postives = 244/396 (61.62%), Query Frame = 1
Query:   28 QFQFRFT----RDSEEVLFAFCFPYSYDDCNKDLESYEDQACLARRDG-MAVQPLITPPPSSTG-YFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPHLFLEHAPPSKCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRS----YTLECNYNTGKAMCNHIPPVNGGRRGERFASPE--RKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSL 1179
            +F  RFT    +  E   FAFC+PYSY D  + L   + +     +DG     P++     S   Y+HRE L  + +GR+VDLLT++  + IL+ERE  + P LF +H  P+  RP  F+ K VVFV+ARVHP ETPASFV +G+L FLL+ +DPRA +L +  VFK++P+LNPDGVA GH+R DS G NLNRHYI P +  H +++A+KA V+   A      +L L++DLHAHA+ RGCFIYGN   ++ +QA +Q+ P L+ LN+ HF++  CNF+  +M  V+  DAGLS EG+ RV   +    +      YTLECNYN G+  C+ IP    G       SPE  RKS   P+Y    W DVG G + A+LD  G + WSR+P S FR++
Sbjct:  135 EFSIRFTHTVVKAGETQFFAFCYPYSYTDLQRMLRRLDSEFSQDPQDGKQQPMPVVRSRLRSQPIYYHRETLAHSLDGRKVDLLTISSLDNILDEREDAL-PGLFPDH--PAMPRPRHFQNKRVVFVTARVHPAETPASFVLEGVLSFLLK-DDPRAHKLLKECVFKIIPMLNPDGVARGHYRHDSLGANLNRHYIRPTLAAHPTIFATKAAVL---ATCHTHSKLALHVDLHAHAAKRGCFIYGNRYDTMPEQAASQVYPKLVGLNSVHFEYDQCNFSELNMHLVEKRDAGLSKEGSARVALHRETAAMCPPVYFYTLECNYNMGRQACS-IPHSGSGLMSTAPLSPEVARKSYV-PKYTTASWEDVGKGMMVAVLDWLGTNEWSRIPHSPFRTM 521          
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Match: A0A6G0XFA4_9STRA (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFA4_9STRA)

HSP 1 Score: 311 bits (797), Expect = 2.000e-93
Identity = 178/411 (43.31%), Postives = 254/411 (61.80%), Query Frame = 1
Query:   28 QFQFRFTRD----SEEVLFAFCFPYSYDDCNKDLESYEDQACLARRDGMAVQPLITPPPSSTGYFHRELLIRTPEGRRVDLLTVTDCNGILNEREPQIDPHLFLEHAPPSKCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRV-FYGKHAGV-LRSYTLECNYNTGKAMCNHIPPVNGGRRGERFASPE--RKSTTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKHLINELRNQ--PSY 1230
            +F  RFT       E V FAFC+PYSY D  + L   +     ARR+  A          S+ Y+HRE L+ + +GR+VDLLT++  + IL+ RE  I P LF +H  P   RPF+F+ K V+F+++RVHP ETP+SFV  G L FLL+ +DPRA +L +  VFK++P+LNPDGVA GH+R DS G NLNRHYI P ++KH +++A+KA ++   A      +L L++DLHAHA+ RGCFIYGN   +  +QA +Q+ P L+ LN+ HF++  CNFT ++M  V+  D GLS +G  RV  + + +G+ +  YTLECN+N G+     IP    G       SPE  RK+   P+Y    W DVG G + A+LD  G + WSR+P S++R++       I +++NQ  PS+
Sbjct:  132 EFSIRFTYTVAVAGETVFFAFCYPYSYTDGQRMLRRLDQD--FARRERTA----------SSMYYHRETLVHSLDGRKVDLLTISSYDNILDNREETI-PGLFPDH--PHTPRPFQFQNKRVIFLTSRVHPAETPSSFVLDGALSFLLKRDDPRAYKLLKECVFKVIPMLNPDGVARGHYRLDSLGANLNRHYISPTMDKHPTIFAAKAAIL---ATCHTMSKLALHVDLHAHAAKRGCFIYGNRYATATEQALSQVYPKLIGLNSVHFEYDQCNFTEQNMHLVEKRDHGLSKDGCARVALHRETSGIPVYFYTLECNFNMGRRP-GSIPHSGSGLMSTAPLSPEVTRKAYV-PKYTTASWEDVGKGMMVAVLDWLGTNEWSRIPHSQWRTMT----GFIQDIKNQVAPSF 518          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9569.21178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM13_ECTSI9.480e-27994.74Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
A0A6H5JLN3_9PHAE2.530e-21179.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RK48_9STRA6.410e-11750.00Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
A0A7S1CCH4_9STRA3.040e-10147.98Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3Y6E6_HETAK3.480e-9943.26Hypothetical protein (Fragment) n=5 Tax=Heterosigm... [more]
A0A835Z1I4_9STRA1.130e-9750.28Peptidase_M14 domain-containing protein n=1 Tax=Tr... [more]
A0A8C5UBP3_9PASS1.480e-9542.89Tubulin-glutamate carboxypeptidase n=1 Tax=Malurus... [more]
A0A3Q0RES4_AMPCI1.770e-9544.05Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
W4HDC5_9STRA1.310e-9444.95Cytosolic carboxypeptidase-like protein 5 n=10 Tax... [more]
A0A6G0XFA4_9STRA2.000e-9343.31Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9569contigEcto-sp13_S_contig9569:8..5714 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score786.9
Seed ortholog evalue7.8e-225
Seed eggNOG ortholog2880.D8LM13
Preferred nameAGBL5
Model size2196
Hectar predicted targeting categoryother localisation
GOsGO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007275,GO:0008092,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009605,GO:0009607,GO:0009615,GO:0009790,GO:0009792,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0016787,GO:0018193,GO:0018200,GO:0019538,GO:0022607,GO:0030030,GO:0030031,GO:0030496,GO:0032501,GO:0032502,GO:0035608,GO:0035610,GO:0035611,GO:0036211,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044782,GO:0045171,GO:0048856,GO:0050896,GO:0051607,GO:0051704,GO:0051707,GO:0060271,GO:0070011,GO:0070925,GO:0071704,GO:0071840,GO:0072686,GO:0098542,GO:0120031,GO:0120036,GO:0140096,GO:1901564
Exons9
EggNOG free text desc.protein deglutamylation
EggNOG OGsCOG2866@1,KOG3641@2759
Ec32 ortholog descriptionPeptidase M14, carboxypeptidase A
Ec32 orthologEc-14_002450.1
Cds size2196
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9569.21178.1prot_Ecto-sp13_S_contig9569.21178.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9569 8..5714 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464221.7830338-CDS-Ecto-sp13_S_contig9569:7..1511681464221.7830338-CDS-Ecto-sp13_S_contig9569:7..151Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 8..151 +
1681464221.7966435-CDS-Ecto-sp13_S_contig9569:518..6621681464221.7966435-CDS-Ecto-sp13_S_contig9569:518..662Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 519..662 +
1681464221.805864-CDS-Ecto-sp13_S_contig9569:1276..14371681464221.805864-CDS-Ecto-sp13_S_contig9569:1276..1437Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 1277..1437 +
1681464221.8149405-CDS-Ecto-sp13_S_contig9569:1910..19711681464221.8149405-CDS-Ecto-sp13_S_contig9569:1910..1971Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 1911..1971 +
1681464221.8249085-CDS-Ecto-sp13_S_contig9569:2540..27071681464221.8249085-CDS-Ecto-sp13_S_contig9569:2540..2707Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 2541..2707 +
1681464221.8339128-CDS-Ecto-sp13_S_contig9569:3076..31701681464221.8339128-CDS-Ecto-sp13_S_contig9569:3076..3170Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 3077..3170 +
1681464221.8524244-CDS-Ecto-sp13_S_contig9569:3559..37661681464221.8524244-CDS-Ecto-sp13_S_contig9569:3559..3766Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 3560..3766 +
1681464221.864317-CDS-Ecto-sp13_S_contig9569:4106..43131681464221.864317-CDS-Ecto-sp13_S_contig9569:4106..4313Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 4107..4313 +
1681464221.8819604-CDS-Ecto-sp13_S_contig9569:4703..57141681464221.8819604-CDS-Ecto-sp13_S_contig9569:4703..5714Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9569 4704..5714 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9569.21178.1

>prot_Ecto-sp13_S_contig9569.21178.1 ID=prot_Ecto-sp13_S_contig9569.21178.1|Name=mRNA_Ecto-sp13_S_contig9569.21178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=732bp
QEEGRHLQLQFQFRFTRDSEEVLFAFCFPYSYDDCNKDLESYEDQACLAR
RDGMAVQPLITPPPSSTGYFHRELLIRTPEGRRVDLLTVTDCNGILNERE
PQIDPHLFLEHAPPSKCRPFEFEGKDVVFVSARVHPGETPASFVFQGILR
FLLEPNDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYID
PDVEKHSSVYASKAVVMHHAARTSGRGRLTLYLDLHAHASARGCFIYGNH
LPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEG
TGRVFYGKHAGVLRSYTLECNYNTGKAMCNHIPPVNGGRRGERFASPERK
STTPPRYHPQIWRDVGAGFLKALLDAEGASVWSRLPQSKFRSLERARKHL
INELRNQPSYREQSLLLRRGTSFPATPPLPTPPQEPGLRGKRRGSTGSVF
GGSRGASPPLSGQSSNLDKAPAATITADLAGAGKSGGGATASSSETDTSR
KLSSSRPPPPLLPRRPVGRKKVSTSRSRSEESVRRTSSQIGGVGGVGGGI
SVVPTRRIGSGSSGSRNGSGRSSSRAGASSVSCKSGATRDWAKAAARRKP
PSPNPGRCRSASREARRGQQSTGRSKRGNASSSSGRGRGRGVGKRGDRDD
SDGGKKGVRSSSSRSERRRAGGASTSSPSSRGRSAAALDRTRHVHCHSKE
QQHRQRLQKAPPPLVVPLLHKYPVNHRKITS*
back to top

mRNA from alignment at Ecto-sp13_S_contig9569:8..5714+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9569.21178.1 ID=mRNA_Ecto-sp13_S_contig9569.21178.1|Name=mRNA_Ecto-sp13_S_contig9569.21178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5707bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9569:8..5714+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAAGAGGGCAGGCACTTGCAGCTCCAATTTCAGTTCCGCTTTACCAG AGATTCGGAGGAGGTGTTGTTTGCCTTTTGTTTCCCCTACAGCTATGACG ACTGCAACAAAGACCTCGAGAGCTACGAAGACCAGGCATGTCTTGTCGCG ATGTGTTCTGTTCTCCCTTTGAAAGGTCGAGTGTCATCATGCTTGCTTAC CGTGAACCAAGCGTGTCTTGAAGTCAACTGCGACCGCCGAGGCTCGATTG ATGCCGCCTTTCCCCCCGCGGTAGTTGACCTGTGACCGCGGAAGGCGTCC GCTTCAGTTGGACCAGTACGGACGTTGTATAAGAATTTGTTGAGCAGAGC TGGGAACGTCTTTTTATGCGAAGACGACAGAATCAACAACACGGTTGCTG ATCGGATTCCGGCCCAATTCGCCTCTTCAGTTAGCCTCCCCGCTGTGCTG CGAGCCTCTGTCCTTGCATGGCCACGTAAACGATCGTCTTTGGCGCCCCG TGTCCTTTCAGGCTAGACGAGACGGGATGGCGGTGCAACCCTTGATAACT CCGCCACCAAGCTCGACCGGCTACTTCCACCGGGAACTGCTCATTCGGAC CCCCGAGGGCAGGCGGGTCGATCTCCTCACGGTCACGGACTGCAACGGCA TTTTGGTGGGTAGGGTCCTGGTGGTGTTGGGCGGTAGCTCGCAACCCGAG CTGCTAGTCTGAGCTCAGCCTCCCTCTCTGCGTCCCTCTCCATTTTGCTC TGAAATTGCCCCGCCAGCTGTGTTGTTGATGGATCGTGCCATGACACGTA AGGTGACTACCTCACGTGCCGTCGAGGCATGTGAATCACATTCCTTAGCT ACGTTAAGCGCGCGATCAAGAATGTGCGTAGCACGCGAAAGGCGCGACTT TTATCATGGGTACTTTCCAACGATCAGGCGTTTCGTACTGGTAGAGAGAG AGAGAGAGAGAGAGAGGTGAGACAGAGATAGAACGCGACGTGTGCGGATA TGCAGAGGTGAAGATAGCTCCGCTTCGTCTTGGGCTACTGCGTGTGTGTC TATTGGGTGGATGGCTGGCTCGACCTTGCCTCCATTTTCTCGGAGTGGTT GTAGACATGGACCGACCAGCAGGTGGGCATTCAATCGGCGGGCGAAGACC TCAAATCAACAACGCTGAACAACTCAGGTTCTTCTCTTCCCCCTCCATAA CTTCGGCAACGTGCACAACCCGCTCTGCTGTGATGGCGACACCGCGCTTA TCCCCCACCCCCCTCCCAGAATGAGCGCGAGCCCCAGATAGACCCCCACT TGTTTCTGGAGCACGCCCCCCCTTCGAAGTGCCGCCCTTTCGAGTTCGAG GGCAAGGATGTCGTTTTCGTGTCCGCGAGGGTTCATCCTGGAGAGACTCC AGCAAGCTTCGTTTTCCAGGGGATTCTGAGGTGAACAGGCCGCAGCCGGC CGGTCCCCCCTGCGACCCCCCCCCCCCCCGTAGCACTCGACCGCGGACCC TCCCCCTTCCCCCTGTAGTTTGGTAATTGTGTGTGCAACAGTACAGCACC GTCATCGTCATCGGCATACCTACGGTGGCTTTTGCTCAACTCTCTACTCA CTCCCAGCTATCGTTGGGCTTGAAGCACTTCGCCCGCCATTCAGCAATGT GTGTACGGTTTTTCTCCGCACGTGTTTCTCTCGTTTGTATCTCCACACCA TGTTGGTCAGACGGAGCTTTAGCCATCCTACGATAACAAAGCAGGACGGA GAAGCGGGTAGAGACAAGAGAACAGAGGGTGGTGAGGTTCGACTACGGCG GCCGAGTTGGGCAGGGGAAGGCATGTTTCAACCTTGCAATAATCTTTGCC TCAATTCTCCCACCTCTCTCCCGACCCACCCGCCCTCCTTCGCTTCCCTC TAGGTTTCTCTTGGAACCAAATGACCCACGTGCCGCGGAGCTTCGGCGAA GATTCGTGTTCAAGGTGTGGAAGGGTTCAGCTATCTTGTGTATGGAGTTT GGTCGCGGTGGCGGTAACGAGGGGACGACACCGAATTGTTGCTGACGCTG ATGAGCTGATACTCGTCAGGAAAATATATATTTTCCGATATCGTATGAGG GGCGATAAAACTGCATTTGGTGTCCGACCCGATCGTGTTCCTTTTTGATG GCAATACCGTTGTGGCTCACGGTCGCGAGGCTTCACATATACACGGCCCA CCCCCGGTACTGAAATCACTTGAACAGAAGCAGCATTGCCTCGGTCACAT GGGTAGCGTTCAAGACTTTCTGGACGATGAGCAAAACAGATGGAGAAGGC CGTACAACCGGTCCTATCGATTCGAACGGCGTGGGATTGCTTCTTTACTT GGCCAACACTTGCGCTTAGCCTGCCATCGTGCCCACCAGCTCTCGACGCG TTCTCCTACTTCGACCAGGATGTGAGAGCGACCCTTCGCAACAAGGGCTC TGTGGACGGCATGGTAATGGGTACCCCCTTCCCCCTTGTCCCACGCCTCC TCGTGCCCTGTGACGCACTTCTGAGTTGCGCAGTTAGTGCCGCTACTGAA CCCCGACGGCGTCGCGGCGGGTCACTTCCGGCAGGATTCGTACGGTAATA ACCTGAACCGGCACTACATCGATCCGGACGTGGAGAAACACTCTTCCGTG TACGCTTCGAAGGCGGTGGTGATGCACCACGCGGCGAGGACCTCGGGAAG GTAGACATTTCGGGAGGGGGGGCAAGGGGGGGCTATGGAGCGGAATCAAT CGGGATAGGTTTCTGTGTTTCTCGAAAATGGTAATGATGTAGGGCTTGTA GGTCAATTGCTGTTAGCTTTATGCACTACACAGCATGAGTGAGAACGTCA CGCACAACAGAAGTGATCTTTTTGGCCTCACTCCTCTCGTCGCCACCCCT GGATGGGGTGGTGGTGTTCAAACAGCAGGTCGCGCCATCCAACCTCGCCT TTCGAACGCGCGAGGGTCACCCGTTCTTTTCACCATTATACCTCCCCCCT CGCGCGCTCTCCCTGCTCTCTTGATGGGTGGCTTCCTGGCTGGGTGGCCG ACCTTGCTTGTGGCCTCAGGGGGCGGCTCACGCTATACCTCGATCTCCAT GCACACGCGTCGGCCAGGGGGTGCTTCATCTACGGCAACCATCTTCCGAG CCTTGAAGACCAGGTGAGCAGTAGTTGGTAGGGCGCGCGAGGACGGCAAG GCGATGAAGCCGTCGGCGGCGTAGATAGTGAAGAGGCCGTTCTTTTGGGG GAGGAGAGGGTGAAGTGTTCGCCGGAAGAAGTGGTGCCAGGCAGTTTTCG AGGGGTGAGCGGGTGATTTTTCCAAACATCGAAAGCTGCGAAGGTCATTC GTTGGAGTTGCGGGAGTGTTCCTGTCTTCGTCGTTATCGGTCTGACGTAA GAGCCAAGTGCCGCCCACGTAAACGAACAACGTCTTCGGTACCAACGTCA AGCTCCTGGTCATGCGGGGCTCCGTATCGCGCCCCCCCCCCCCCTCCCAC GCCTCCCCTTGCCTTCCCTATCCGCGAAACTCATGCTCATCGACACCTTC AGGCGGAGAATCAGCTGCTGCCGCTCCTTATGACGTTGAACACGCCGCAC TTCGACTTCGGGTCGTGCAACTTCACGCTGAAGCACATGTGCCGCGTAGA CAGCGGAGACGCCGGCCTGAGCGCGGAAGGGACCGGGCGGGTCTTCTACG GCAAGCACGCGGGAGTCCTGCGGTCATACACGCTGGAGTGCAACTACAAC ACGGGCAAGGTGAGCGAGATGTCTACATATTGAGAGAGAGTGGAGACGGA TCGATCTCTCCGACGGATATTGGCTTCGCCGCTATCGCGCTCGAGCTGCC GTGCCCCGTCTGAGCGCACGGTTGTGTGAGTGTTCGGCTGCCAGAAACAC GCGCGTCGACACGGCCACCCACCCACGCACCCACCCACCCTCCGAAAGTG TGCGCGAGGGCAAAGGAAGGATGATGATGTACATTGATACGGGTTGGTAC GGTAAGAAACTTGTACCGGTGAACAGTCGCTGTCCCGGAAGAGAGGTAGA TGGGAGTGACGGCGTTCACGATTCTGCTGTTGCTGTCCGACCTGTTCAGG CTATGTGCAACCACATTCCGCCGGTGAATGGAGGGAGGCGAGGAGAGCGG TTCGCGAGTCCTGAGAGGAAGAGCACGACGCCGCCGCGGTACCATCCGCA AATCTGGCGGGATGTCGGCGCGGGGTTCCTGAAGGCCTTGCTGGATGCCG AGGGCGCCTCTGTCTGGTCGAGGCTGCCACAGTCCAAGTTCAGGTCGCTT GAGAGGGTGAGCATAGGACGAAGGAATGAACGCCCCCCCGAGATCATCGA GCTGGTAGGCGGCGGCAAAACGTACCTCAACAAAGCTTCTGTGCAGCTGT ATGGTGATGTTCATACTGCCCATTGTTTTCGGTGGGACCAAGGCTAGCTG ACGGGCTTGCGCGAGTTCACATTCTTAGAAGCAGCATAGATGTACTGCTG TAGCGATAGATCACATAGTGGACGACGCTGTCTTTAGCTATCGATGTCGC CGCGCACCCACCGCGTCCCGCCGATCACCCCTCGACTTCTCATCGTACTC TCCCCGTTGCCCTCCGCGTGCCCTCCCCCCGCCGCCGCCAACCTCTCCGC CCCGCTCCCCCTGTCGTTTCGAAACGACTTTCCTTTTACCCCCAAGGCGA GGAAACATCTCATCAACGAGCTCCGCAACCAGCCATCGTACCGAGAGCAA TCGCTGCTCCTACGGCGGGGGACGTCTTTTCCTGCCACCCCGCCGTTGCC AACCCCGCCCCAGGAACCGGGGCTTCGAGGAAAGAGAAGGGGGAGCACAG GAAGTGTGTTTGGTGGCTCTAGGGGTGCTTCTCCTCCGCTGTCGGGGCAA TCCTCAAACCTAGACAAGGCACCGGCGGCTACTATCACGGCGGATCTCGC CGGGGCCGGGAAAAGCGGTGGCGGCGCTACAGCCTCGTCGAGCGAGACCG ATACCAGCAGGAAGCTGTCGAGCTCTCGACCACCACCACCCCTGCTGCCG CGGCGCCCTGTAGGCCGGAAGAAAGTCTCCACCAGCAGAAGTCGATCTGA GGAATCCGTCCGCAGGACGTCAAGCCAAATTGGCGGCGTCGGCGGCGTCG GCGGCGGTATAAGTGTAGTACCGACGAGGCGCATCGGGAGCGGCAGTAGC GGCAGCCGGAACGGCAGCGGCCGTAGCAGCAGTAGGGCCGGCGCAAGCAG TGTGAGCTGCAAGAGCGGCGCTACGCGTGATTGGGCGAAGGCGGCGGCGC GGCGAAAGCCGCCATCCCCGAACCCCGGCCGCTGCCGGTCCGCGTCTCGT GAAGCGAGGAGAGGGCAGCAAAGCACGGGCCGAAGCAAGAGAGGAAATGC ATCATCATCTTCAGGGAGAGGGAGGGGCAGGGGGGTAGGAAAAAGAGGCG ATCGAGACGACAGCGACGGCGGAAAGAAAGGAGTCAGATCGTCATCCTCT CGGTCCGAGAGACGCAGGGCCGGCGGCGCGAGCACAAGCAGCCCTTCGTC ACGTGGCAGGAGTGCCGCCGCCCTGGATCGGACTAGGCATGTCCATTGTC ATAGTAAGGAGCAACAGCACCGCCAGCGGCTGCAGAAAGCACCGCCCCCG CTGGTGGTGCCCCTTCTCCACAAATACCCGGTGAACCACAGGAAGATAAC CAGTTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9569:8..5714+

>mRNA_Ecto-sp13_S_contig9569.21178.1 ID=mRNA_Ecto-sp13_S_contig9569.21178.1|Name=mRNA_Ecto-sp13_S_contig9569.21178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2196bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9569:8..5714+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAAGAGGGCAGGCACTTGCAGCTCCAATTTCAGTTCCGCTTTACCAG
AGATTCGGAGGAGGTGTTGTTTGCCTTTTGTTTCCCCTACAGCTATGACG
ACTGCAACAAAGACCTCGAGAGCTACGAAGACCAGGCATGTCTTGCTAGA
CGAGACGGGATGGCGGTGCAACCCTTGATAACTCCGCCACCAAGCTCGAC
CGGCTACTTCCACCGGGAACTGCTCATTCGGACCCCCGAGGGCAGGCGGG
TCGATCTCCTCACGGTCACGGACTGCAACGGCATTTTGAATGAGCGCGAG
CCCCAGATAGACCCCCACTTGTTTCTGGAGCACGCCCCCCCTTCGAAGTG
CCGCCCTTTCGAGTTCGAGGGCAAGGATGTCGTTTTCGTGTCCGCGAGGG
TTCATCCTGGAGAGACTCCAGCAAGCTTCGTTTTCCAGGGGATTCTGAGG
TTTCTCTTGGAACCAAATGACCCACGTGCCGCGGAGCTTCGGCGAAGATT
CGTGTTCAAGTTAGTGCCGCTACTGAACCCCGACGGCGTCGCGGCGGGTC
ACTTCCGGCAGGATTCGTACGGTAATAACCTGAACCGGCACTACATCGAT
CCGGACGTGGAGAAACACTCTTCCGTGTACGCTTCGAAGGCGGTGGTGAT
GCACCACGCGGCGAGGACCTCGGGAAGGGGGCGGCTCACGCTATACCTCG
ATCTCCATGCACACGCGTCGGCCAGGGGGTGCTTCATCTACGGCAACCAT
CTTCCGAGCCTTGAAGACCAGGCGGAGAATCAGCTGCTGCCGCTCCTTAT
GACGTTGAACACGCCGCACTTCGACTTCGGGTCGTGCAACTTCACGCTGA
AGCACATGTGCCGCGTAGACAGCGGAGACGCCGGCCTGAGCGCGGAAGGG
ACCGGGCGGGTCTTCTACGGCAAGCACGCGGGAGTCCTGCGGTCATACAC
GCTGGAGTGCAACTACAACACGGGCAAGGCTATGTGCAACCACATTCCGC
CGGTGAATGGAGGGAGGCGAGGAGAGCGGTTCGCGAGTCCTGAGAGGAAG
AGCACGACGCCGCCGCGGTACCATCCGCAAATCTGGCGGGATGTCGGCGC
GGGGTTCCTGAAGGCCTTGCTGGATGCCGAGGGCGCCTCTGTCTGGTCGA
GGCTGCCACAGTCCAAGTTCAGGTCGCTTGAGAGGGCGAGGAAACATCTC
ATCAACGAGCTCCGCAACCAGCCATCGTACCGAGAGCAATCGCTGCTCCT
ACGGCGGGGGACGTCTTTTCCTGCCACCCCGCCGTTGCCAACCCCGCCCC
AGGAACCGGGGCTTCGAGGAAAGAGAAGGGGGAGCACAGGAAGTGTGTTT
GGTGGCTCTAGGGGTGCTTCTCCTCCGCTGTCGGGGCAATCCTCAAACCT
AGACAAGGCACCGGCGGCTACTATCACGGCGGATCTCGCCGGGGCCGGGA
AAAGCGGTGGCGGCGCTACAGCCTCGTCGAGCGAGACCGATACCAGCAGG
AAGCTGTCGAGCTCTCGACCACCACCACCCCTGCTGCCGCGGCGCCCTGT
AGGCCGGAAGAAAGTCTCCACCAGCAGAAGTCGATCTGAGGAATCCGTCC
GCAGGACGTCAAGCCAAATTGGCGGCGTCGGCGGCGTCGGCGGCGGTATA
AGTGTAGTACCGACGAGGCGCATCGGGAGCGGCAGTAGCGGCAGCCGGAA
CGGCAGCGGCCGTAGCAGCAGTAGGGCCGGCGCAAGCAGTGTGAGCTGCA
AGAGCGGCGCTACGCGTGATTGGGCGAAGGCGGCGGCGCGGCGAAAGCCG
CCATCCCCGAACCCCGGCCGCTGCCGGTCCGCGTCTCGTGAAGCGAGGAG
AGGGCAGCAAAGCACGGGCCGAAGCAAGAGAGGAAATGCATCATCATCTT
CAGGGAGAGGGAGGGGCAGGGGGGTAGGAAAAAGAGGCGATCGAGACGAC
AGCGACGGCGGAAAGAAAGGAGTCAGATCGTCATCCTCTCGGTCCGAGAG
ACGCAGGGCCGGCGGCGCGAGCACAAGCAGCCCTTCGTCACGTGGCAGGA
GTGCCGCCGCCCTGGATCGGACTAGGCATGTCCATTGTCATAGTAAGGAG
CAACAGCACCGCCAGCGGCTGCAGAAAGCACCGCCCCCGCTGGTGGTGCC
CCTTCTCCACAAATACCCGGTGAACCACAGGAAGATAACCAGTTGA
back to top