mRNA_Ecto-sp13_S_contig9526.21135.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: D7FRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF7_ECTSI) HSP 1 Score: 404 bits (1039), Expect = 1.990e-139 Identity = 196/204 (96.08%), Postives = 200/204 (98.04%), Query Frame = 1
Query: 1 RKMMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAEDRLLLLSDGVGDITAVDLRTTTQVWKREAHEKKVNTVHVHPGNRHLFVT 612
R+MMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKV GNVGLWTVDETDD DAAHGVFQFKPHTGAV RMTFDPLDGNK+LSTSYDGTVRRMDVEKGAFEQVF NKAGE+AFFTDGHL+AEDRLLLLSDGVGDITAVDLRTTTQVWKREAHEKKVNTVHVHPGNRHLFVT
Sbjct: 199 RQMMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKV-GNVGLWTVDETDDRDAAHGVFQFKPHTGAVPRMTFDPLDGNKLLSTSYDGTVRRMDVEKGAFEQVFGNKAGEDAFFTDGHLVAEDRLLLLSDGVGDITAVDLRTTTQVWKREAHEKKVNTVHVHPGNRHLFVT 401
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: A0A6H5K3Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y8_9PHAE) HSP 1 Score: 138 bits (348), Expect = 3.060e-36 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
Query: 211 VGNVGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQ 405
VGNVGLWTVDETDDNDAAHGVFQFKPHTGAV RMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQ
Sbjct: 260 VGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQ 324
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: E9H8N0_DAPPU (WD repeat-containing protein 76 n=3 Tax=Daphnia TaxID=6668 RepID=E9H8N0_DAPPU) HSP 1 Score: 122 bits (307), Expect = 6.600e-29 Identity = 70/205 (34.15%), Postives = 108/205 (52.68%), Query Frame = 1
Query: 4 KMMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAEDRLLLLSDGVGDITAVDLRTTTQVWKR--EAHEKKVNTVHVHPGNRHLFVT 612
K + ++ +++G E A+ D LK + + E GV KV + R YS WHPS KLL+AVGD+ GN+G W +D+ DD GV FK H ++ +TFD + ++L+TSYDG VR +D+ F++V+ K + T H + L++S GD+ VD RT + E T+ +HP + +LF+T
Sbjct: 212 KFIEEMIPLLEKEGELEKLP-ADQQDFLKLMKSFSINEEGVAKVSKSRIYSLAWHPSNCKLLVAVGDRD-GNIGFWDIDKLDDKH--QGVRAFKVHNQPINCITFDKFNSTRLLTTSYDGYVRCLDLHSNVFDEVYSIKRTNNTW-TAYHAQKDPSTLIISQSNGDVAVVDCRTKPGSVANLIQCFEMSARTISLHPQDENLFMT 411
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: A0A8J2WHD0_9CRUS (WD repeat-containing protein 76 n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WHD0_9CRUS) HSP 1 Score: 117 bits (293), Expect = 8.180e-27 Identity = 71/212 (33.49%), Postives = 114/212 (53.77%), Query Frame = 1
Query: 4 KMMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDK------VVGN-VGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAEDRLLLLSDGVGDITAVDLRTTT-QVWKR-EAHEKKVNTVHVHPGNRHLFVT 612
K + ++ +++G E A+ D LK + + E GV KV + R YS WHPS KLL+AVGD+ +V N G W +D+ +D GV FK H ++ +TFD + ++L+TSYDG VR +D+ F++V+ K ++ + T H + L++S GD+ VD+RT +V K + E T+ +HP + +LF+T
Sbjct: 428 KFIEEMIPLLEKEGELEKLP-ADQQDFLKLMKSFTIHEEGVAKVSKSRIYSLAWHPSNCKLLVAVGDRDGNVANIVNNHTGFWDIDKLEDKH--QGVRAFKVHNQPINCITFDKFNSTRLLTTSYDGYVRCLDLHSNVFDEVYSIKRTKDTW-TAYHAQKDPATLIVSQSNGDVAVVDVRTKPGRVEKMIQCFEMSARTISLHPQDENLFMT 635
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: A0A7S1J3R6_9EUGL (Guanine nucleotide-binding protein subunit beta-like protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J3R6_9EUGL) HSP 1 Score: 116 bits (291), Expect = 1.060e-26 Identity = 71/172 (41.28%), Postives = 90/172 (52.33%), Query Frame = 1
Query: 124 VCKVVRERAYSTTWHPSGDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAED-RLLLLSDGVGDITAVDLR------TTTQVWKREAHEKKVNTVHVHPGNRHLFVTVS 618
V KVV ER YS +HPS KLL+A GDK GN+GLW VD + D VF +KPH + + + P D +K+++ SYDGTVR MDV KG F ++F E + G L D + ++ G + AVD R W AH KK NTVH P HL T S
Sbjct: 253 VAKVVPERIYSCAFHPSTSKLLVAAGDKQ-GNLGLWNVDAAAEVDP---VFLYKPHGSVIGALQYKPDDSSKLVTWSYDGTVRCMDVVKGEFARMFVVNEDEHGWVQHGCLSEGDPNAMYVATSQGKVMAVDWRQCGPGAAPKPQWTLPAHLKKCNTVHSSPAAPHLLATCS 420
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: A0A0P5K982_9CRUS (WD repeat-containing protein 76 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5K982_9CRUS) HSP 1 Score: 113 bits (282), Expect = 1.870e-25 Identity = 66/205 (32.20%), Postives = 107/205 (52.20%), Query Frame = 1
Query: 4 KMMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAEDRLLLLSDGVGDITAVDLRTTTQVWKREAH--EKKVNTVHVHPGNRHLFVT 612
K + ++ +++G E A+ D LK + + E GV KV + R YS WHPS KLL+A D+ GN+G W +D+ +D GV F+ H ++ TFD + ++L+TSYDG VR +D+ ++V+ + + + T H + L++S GD+ VD+RT + H E TV +HP + +LF+T
Sbjct: 224 KFIEEMIPLLEKEGELEKLP-ADQQDFLKLMRSFSIREEGVAKVTKSRIYSMAWHPSNSKLLIAACDRD-GNIGFWDIDKHEDKH--QGVRAFRVHKQPINCATFDKFNPMRLLTTSYDGYVRCLDMHSNVVDEVYSIQRTKNTW-TAYHAQKDPSTLIVSQSNGDVVVVDVRTKPSKVENVIHCFEMSARTVSLHPQDDNLFMT 423
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: V4A1W1_LOTGI (WD repeat-containing protein 76 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A1W1_LOTGI) HSP 1 Score: 110 bits (276), Expect = 1.020e-24 Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 85 LKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAEDRLLLLSDGVGDITAVDLRT--TTQVWKREAHEKKVNTVHVHPGNRHLFVTVS 618
LK ++ LK+EETG+ KVV R +S HP DKLL+A G K G VGLW VD TD+ D GV +KP+ V+ ++F + +TSYDG+ R D E G F +++ + E + + + LL+ S G + VD RT TT E HE+ + T+++HP ++ F T S
Sbjct: 210 LKEINNLKLEETGIAKVVPTRVFSLAIHPMVDKLLIAAGGKW-GGVGLWDVDSTDNQD---GVVAYKPYVSPVNWVSFHQDYPAHIYTTSYDGSCRYADFETGKFLEIYAVPSDENILLRNADFLTSETLLI-SQSDGCVALVDRRTPSTTAENIYEVHERPLRTLNIHP-DKQYFCTAS 383
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: A0A8J9WJU0_9CHLO (WD repeat-containing protein 76 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WJU0_9CHLO) HSP 1 Score: 109 bits (273), Expect = 2.250e-24 Identity = 65/191 (34.03%), Postives = 102/191 (53.40%), Query Frame = 1
Query: 91 RLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKVVGNVGLWTVD------------ETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAEDRLLLLSDGVGDITAVDLRTTTQVWKREAHEKKVNTVHVHPGNRHLFVTVSERR 627
+L L+++E+ V KV RE +HP +L++A GDK G+V LW VD + +D+ + GV+ FKPHT +S + + +L+ +YDG VRRMD +G FE + E++ F+ A+ +LL D GD+ VD R ++ H++K+NT+H+ PG HL V+ S R
Sbjct: 183 QLKKLRLKESDVAKVTREGISHLAFHPQAPQLIVATGDKQ-GHVALWDVDKKTAPEAAEEDADVEDSGSEDGVYLFKPHTSYISGLRWA---SGCLLTAAYDGIVRRMDPAQGEFELLAVR---EDSEFSAFDCTADGNSMLLGDKDGDVEVVDARDPSKGTSINLHDRKINTLHIEPGEEHLVVSSSGDR 366
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: K3W540_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W540_GLOUD) HSP 1 Score: 108 bits (270), Expect = 5.720e-24 Identity = 68/190 (35.79%), Postives = 102/190 (53.68%), Query Frame = 1
Query: 88 KRLSCLKVEETGV------------CKVVRERAYSTTWHPSGDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAEDRLLLLSDGVGDITAVDLRTTTQVWKREA-HEKKVNTVHVHPGNRHLFVTVS 618
++ S LKV+ TGV K ER YS +H DKL++A GDK GN+ LW+ DE +DA V ++PHT ++++ F P D K++S S+DG++R D++ GAF +++ + ++ T L E L+S G + +VD R + + R HEKK+NTVH HP R T S
Sbjct: 158 EKESDLKVDATGVETVNYQLSSEDIVKATEERIYSIVFHSRQDKLVVATGDKR-GNLSLWSADEP--SDAEDVVVMYRPHTLPITQLHFAPEDSTKLVSASFDGSIREFDLKAGAFSELYGTQ--DDVGITSMTLDIEHNAYLISCDDGHVCSVDRRESQKNASRFLLHEKKINTVHQHPEFRFCLATAS 342
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Match: A0A498LFG4_LABRO (WD repeat-containing protein 76 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498LFG4_LABRO) HSP 1 Score: 108 bits (270), Expect = 6.860e-24 Identity = 66/199 (33.17%), Postives = 109/199 (54.77%), Query Frame = 1
Query: 19 LVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVSRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQVFCNKAGEEAFFTDGHLIAEDRLLLLSDGVGDITAVDLRTTTQVWKR--EAHEKKVNTVHVHPGNRHLFV 609
L+ ++ D +++ E ++ + L L ++++ V KVV++R S +HPS LL+A GDK G++GLW D +D GV F+PH+ ++ M F N +++ SYDG+ R MDVEK F++V+ + G ++F L A+ LLL + GD+ VD RT ++ + +VH+HP +H FV
Sbjct: 194 LINLWNEDALKQETETSDLKSYQQMLQRLSIDDSCVVKVVKDRVCSAAFHPSSSNLLMAAGDKS-GHLGLWKPDAKWGDD---GVIYFEPHSRPITSMAFTSHPCN-LITISYDGSARSMDVEKAVFDEVYRSHFGLKSF---DFLSADYSTLLLGEWNGDVAVVDRRTPETSYESLYTMAANPLRSVHIHPVQQHYFV 384 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9526.21135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9526.21135.1 >prot_Ecto-sp13_S_contig9526.21135.1 ID=prot_Ecto-sp13_S_contig9526.21135.1|Name=mRNA_Ecto-sp13_S_contig9526.21135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp MMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSback to top mRNA from alignment at Ecto-sp13_S_contig9526:3440..5785- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9526.21135.1 ID=mRNA_Ecto-sp13_S_contig9526.21135.1|Name=mRNA_Ecto-sp13_S_contig9526.21135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2346bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9526:3440..5785- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9526:3440..5785- >mRNA_Ecto-sp13_S_contig9526.21135.1 ID=mRNA_Ecto-sp13_S_contig9526.21135.1|Name=mRNA_Ecto-sp13_S_contig9526.21135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=624bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9526:3440..5785- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |