mRNA_Ecto-sp13_S_contig952.21128.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig952.21128.1
Unique NamemRNA_Ecto-sp13_S_contig952.21128.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K)

HSP 1 Score: 667 bits (1721), Expect = 1.460e-225
Identity = 333/429 (77.62%), Postives = 369/429 (86.01%), Query Frame = 3
Query: 1578 MATPTPKREKLT---GITSIWRAGFDPTNVTASTPRTK-KYKSPVSLKKVFDRPHEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTDRERLDQRRATYDRLRRNGSALSALHGLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            MA+   KR KL+   G+T++ RAGFDP++V   +PRTK  YKSPV+LK VF+RP E QVK FYHARNHSGVP+ RL DA+KL WTESLHDN CLMGYLVYSQLLPCA+ENR KLKS SAHWNEL+ STDR RL+QRRA YDRLRRNGS LSA +GLPYSVD  KNVLEYMNIDFEQSDLRHR F+ R+FA+T+SE GK+  SSVYTSCS ALSL+YF VV LGRPCCLESV+LP+SVTERSVLEQTWGCPG H+DG INKFQTNWREVFRAI TPHR+INYVCLE+ATEESYIGGKHVAD F L+  TRSAPGD KTI    NHYRL+SK GVE+GAVVCVLDVLREKP+EAVGKIDGSVLGAITSTYGQ+VSL VQ RCLGLQAG HSLFD SVSNKL E+I+H+D  LWKARKRL+VEL VN SLDP
Sbjct:    1 MASQATKRTKLSSSAGLTTLLRAGFDPSDVATLSPRTKVTYKSPVTLKNVFERPTESQVKVFYHARNHSGVPFDRLSDAEKLTWTESLHDNSCLMGYLVYSQLLPCAAENRVKLKSGSAHWNELNVSTDRARLEQRRAAYDRLRRNGSTLSAFYGLPYSVDMTKNVLEYMNIDFEQSDLRHRFFLGREFAMTSSEHGKMNASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVLEQTWGCPGTHLDGPINKFQTNWREVFRAIGTPHRSINYVCLERATEESYIGGKHVADCFALYNATRSAPGDAKTIAGLANHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGQRVSLDVQARCLGLQAGEHSLFDCSVSNKLGEIINHADIALWKARKRLKVELKVNDSLDP 429          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)

HSP 1 Score: 655 bits (1689), Expect = 6.410e-214
Identity = 325/423 (76.83%), Postives = 361/423 (85.34%), Query Frame = 3
Query: 1587 PTPKREKLTGITSIWRAGFDPTNVTASTPRTK-KYKSPVSLKKVFDRPHEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTDRERLDQRRATYDRLRRNGSALSALHGLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            P+P   +  G+T++ RAGF+P++V   +PRTK  YKSPV+LK VFDRP E QVK FYH+RNHSGVP++RL DA+KL WTESLHDN CLMGYLVYSQLLPCASENR KLKS SAHWNEL+ STDR RL QRRA YDRLRRNGS  SA +GLPYSVD  KNVL YMNIDFEQSDLRHR F+ R+FA+T+SE GK+  SSVYTSCS ALSL+YF VV LGRPCCLESV+LP+SVTERSVLEQTWGCPG H+DG INKFQTNW EVFRAI TPHRNINYVCLE+ATE+ YIGGKHVAD F L+  TRSAPGD KTI   VNHYRL+SK GVE+GAVVCVLDVLREKP+EAVGKIDGSVLGAITSTYG++VSL VQ RCLGLQAG HSLFD SVSNKL E+I+H+D  LWKARKRL VEL VN SLDP
Sbjct:  542 PSPASPEDVGLTTLLRAGFNPSDVATLSPRTKVTYKSPVTLKNVFDRPTESQVKIFYHSRNHSGVPFNRLSDAEKLIWTESLHDNSCLMGYLVYSQLLPCASENRVKLKSGSAHWNELNVSTDRARLGQRRAAYDRLRRNGSTFSAFYGLPYSVDMTKNVLAYMNIDFEQSDLRHRFFLGREFAMTSSEHGKINASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVLEQTWGCPGTHLDGPINKFQTNWCEVFRAIGTPHRNINYVCLERATEDCYIGGKHVADCFALYNATRSAPGDAKTIKGLVNHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGKRVSLDVQARCLGLQAGEHSLFDCSVSNKLGEIINHADMKLWKARKRLIVELKVNDSLDP 964          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: B2KWI7_ECTSI (EsV-1-213-like protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI7_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 1.350e-135
Identity = 218/415 (52.53%), Postives = 287/415 (69.16%), Query Frame = 3
Query: 1617 ITSIWRAGFDPTNVTASTPRTKK-YKSPVSLKKVFDRPHEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTD--RERLDQRRATYDRLRRNGSALSALHGLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            +T++    FD  +V  S   TK  ++ PV++  VF  P   QVK FY +R+  G P+  LP+ +KLAWTES HDN+ LMG++VY+QL P   +NR KL +A+ HW  L  S++  R +L+QRR   DRL+RNGS  S   GLPY+VDT+ N+L +M +D E+ D R R F  R+F++  S+RG+V  SSVY SCS ALSLL+FA   L RPCCLES++LP+SVTER  +EQ + CP Q  DG I  FQTNW++VF AIDT HRNINY  LEKA E  YI G H+AD++ +F+ T +AP D  +ITA V  Y  H+K GVE+GAVV V+DV+R+K VEA+GKIDG VLG+I   YG++  L VQ  C GL+ G+ SLFD SVSNKL E+++H D  LWKARK+ +VE  V  ++DP
Sbjct:   20 VTTLDNKAFDEKDVAESKTHTKMTFRCPVTIDNVFTAPTATQVKVFYESRSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGSTRSVFMGLPYTVDTSANILTFMKMDVEEEDERFRFFTKREFSMIFSKRGEVSSSSVYASCSMALSLLWFATAVLARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATMTAPDDMNSITALVRSYIQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFPAYGERACLKVQAECSGLEGGS-SLFDDSVSNKLTEILAHFDCELWKARKKDKVERVVAANMDP 433          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 7.890e-132
Identity = 215/415 (51.81%), Postives = 284/415 (68.43%), Query Frame = 3
Query: 1617 ITSIWRAGFDPTNVTASTPRTKK-YKSPVSLKKVFDRPHEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTD--RERLDQRRATYDRLRRNGSALSALHGLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            +T++    FD   +  S   TK  ++ PV++  VF  P   QVK FY +R+  G P+  LP+ +KLAWTES HDN+ LMG++VY+QL P   +NR KL +A+ HW  L  S++  R +L+QRR   DRL+RNG   S   GLPY VDT+ ++L YM +D E+ D R R F  R+F++  S+RG+V  SSVY SCS ALSLL+FA   L RPCCLES++LP+SVTER  +EQ + CP Q  DG I  FQTNW++VF AIDT HRNINY  LEKA E+ YI G H+AD++ +F+ T +AP D  +I A V  Y  H+K GVE+GAVV V+DV+R+K VEA+GKIDG VLG+I S YG++  L VQ  C  L+ G+ SLFD SVSNKL E+++H D  LWKARK+ +VE  V  ++DP
Sbjct:   20 VTTLDNKAFDEKELAESKTHTKMTFRCPVTIDNVFTAPTSTQVKVFYESRSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGFTRSVFMGLPYRVDTSADILAYMKMDVEEEDERFRFFTKREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAILARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEDKYIEGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFSAYGERACLKVQAECSRLEGGS-SLFDDSVSNKLAEILAHFDCELWKARKKDKVERVVAANMDP 433          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 2.620e-128
Identity = 212/415 (51.08%), Postives = 281/415 (67.71%), Query Frame = 3
Query: 1617 ITSIWRAGFDPTNVTASTPRTKK-YKSPVSLKKVFDRPHEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTD--RERLDQRRATYDRLRRNGSALSALHGLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            +T++    FD  +V  S   TK  ++ PV++  VF  P   QV  FY + +  G P+  LP+ +KLAWTES HDN+ LMG++VY+QL P   +NR KL +A+ HW  L  S++  R +L+QRR   DRL+RNG   S   GLPY VDT+ ++L YM +D E+ D R R F  R+F++  S+RG+V  SSVY SCS ALSLL+ A   L RPCCLES++LP+SVTER  +EQ + CP Q  DG I  FQTNW++VF AIDT HRNINY  LEKA E+ YI G H+AD++ +F+ T +AP D  +I A V  Y  H+K GVE+GAVV V+DV+R+K VEA+GKIDG VLG+I S YG++  L VQ  C  L+ G+ SLFD SVSNK  E+++H D  LWKARK+ +VE  V  ++DP
Sbjct:   20 VTTLDTKAFDEKDVAESKTHTKMTFRCPVTIDNVFTAPTATQVNVFYESSSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGFTRSVFMGLPYRVDTSAHILAYMKMDVEEEDERCRFFTKREFSMIYSKRGQVGSSSVYASCSMALSLLWVATAILARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEDKYIKGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFSAYGERACLKVQPECSRLEGGS-SLFDDSVSNKQTEILAHFDCELWKARKKDKVERVVAANMDP 433          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: D8LP31_ECTSI (EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP31_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 6.080e-126
Identity = 211/432 (48.84%), Postives = 285/432 (65.97%), Query Frame = 3
Query: 1584 TPTPKREKLTGI-------TSIWRAGFDPTNVTASTPRTKKYKSPVSLKKVFDRPHEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTD--RERLDQRRATYDRLRRNGSALSALHGLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            +P PKR K++ I       T++ +  F+   V  +T  T  +K PVS KK+F  P + QV+ FY ARN SG PY RLP A+KLAW ESL DN  L+G+ VYSQL P   ENR KL  AS H+ ++  +T   R +L+QRR    RL+R GSA S  HGLPY VD +K++L++M +DF+  D R R F+ RDFA  + +RG+   SSVY SCS+A+ L++FA V LGRP   ESVVLP++V ER VLE+ W CP  H+DG I  ++T+WR VFRAI+ PHRNI Y+ LE+A ++ YI G HV D + LFK TRSAPGD + I      Y   +K G+E G VV  LD++R++PV++VG++DGSVLG+I  TYG++  +     C   Q G  +LFD SV  KL E+++H D+ LWK RKRL++   V+ +LDP
Sbjct:    5 SPAPKRIKVSSISKAKKQITTLQKPNFNANEVKRATKETTSFKCPVSPKKIFLEPTDGQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRNQLEQRREALTRLQRVGSARSVFHGLPYGVDKSKSILQFMKMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRTYTEKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIHLTYGERAGVAAMAACNTPQGGP-TLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSNNLDP 435          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.070e-125
Identity = 213/423 (50.35%), Postives = 287/423 (67.85%), Query Frame = 3
Query: 1596 KREKLTGITSIWRAGFDPTNVTASTPRTKK-YKSPVSLKKVFDRPHEDQVKDFYHARN-HSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTD--RERLDQRRATYDRLRRNGSALSALHGLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            KR KL+ IT++    F+  +V      TK  ++ PV++  VF  P   QV+ FY +R   SG P+  LP+ + LAWTES HDN+ LMG++VYSQL P   + R KL +A+ HW  L  +++  R +L+QRR+  DRL+RNG   S   GLP+ VDT  N+L +M +D ++ D R R F  R+F++  +ERG+V  SSVY+SCS ALSLL+FA   L RPCCLESV+LP+SV ER ++EQ + CP +  DG I  F TNW++VF AI T HRNI+Y  LEKA E  YI G HVAD++  F+ T +APGD  +I A V  Y+ HSK GVE+GAVV ++DV+R+KPVEA+GKIDG VLG I  TYG++    V+  C  L++G+ +LFD SVSNKLRE+++H D  LWKARK+ +VE  V  +LDP
Sbjct:    9 KRAKLSPITTLDNIDFNVNDVAEPKTHTKMTFRCPVTIDSVFSAPTPAQVQMFYESRTGSSGKPFGDLPEDEILAWTESFHDNKTLMGFIVYSQLFPKLLQTRIKLNAATYHWGHLDPASEKGRTKLEQRRSADDRLKRNGFTPSVFRGLPHRVDTCANILAFMKMDVDEEDERLRFFNRREFSILVAERGQVGSSSVYSSCSMALSLLWFATTVLARPCCLESVILPLSVAERKMMEQRFRCPPECFDGPIKSFHTNWKDVFTAIGTCHRNIDYTLLEKACENKYIEGVHVADVYAAFRATMTAPGDMNSIAALVQSYKEHSKHGVESGAVVGIIDVIRDKPVEAIGKIDGGVLGTIFQTYGERACAEVRAACNKLESGS-TLFDDSVSNKLREIMAHFDCELWKARKKEKVERIVAANLDP 430          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: D7FZG9_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG9_ECTSI)

HSP 1 Score: 399 bits (1026), Expect = 1.570e-124
Identity = 195/239 (81.59%), Postives = 214/239 (89.54%), Query Frame = 3
Query: 2136 LTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            +T+SE GK+  SSVYTSCS ALSL+YF VV LGRPCCLESV+LP+SVTERSVLEQTWGCPG H+DG INKFQTNWREVFRAI TPHRNINYVCLE+ATEESYIGGKHVAD F L+  TRSAPGD KTI   VNHYRL+SK GVE+GAVVCVLDVLREKP+EAVGKIDGSVLGAITSTYG++VSL VQ RCLGLQAG HSLFD+SVSNKL E+I+H+DT LWKARKRL+VEL VN SLDP
Sbjct:    1 MTSSEHGKMNASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVLEQTWGCPGTHLDGPINKFQTNWREVFRAIGTPHRNINYVCLERATEESYIGGKHVADCFALYNATRSAPGDAKTIAGLVNHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGKRVSLDVQARCLGLQAGEHSLFDSSVSNKLGEIINHADTKLWKARKRLKVELKVNDSLDP 239          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 1.940e-115
Identity = 204/435 (46.90%), Postives = 275/435 (63.22%), Query Frame = 3
Query: 1572 PNMATPTPKREKLTG---ITSIWRAGFDPTNVTASTPRTK-KYKSPVSLKKVFDRPHEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTDRERL--DQRRATYDRLRRNGSALSALHGLPYSVDTAKN--VLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            P +  P  KR K +G   +T++    FD  +V A+    K  ++ PV++  VF  P  DQV  FY +RNH   P+  L + ++  W ES HDN+ LMG++VY+ L P    NR KL +A+ HW  L  S+ + RL  +QRR    RLRR G A S   GLP+ +D   +  +L +MN+  E+ D R R F  R+F++  SERG+V  SSVY+SCSTALSLL+FA   L RPCCLES++LPI+V ER  +EQ +GCP    DG I  FQT W  VF AI TPHR+I+Y  +E AT E Y+ G HV+D +  F+ T +APGD  +I A V  YR  +K GVE+GAVV  LDV+R++P  A+GKIDG VLG I STYG+    +VQ  C+ L  GA SLFD SV +KL E+++H D  LW+ARK+ +VE  +  ++DP
Sbjct:    6 PVIKPPPSKRAKRSGAERVTTLDNPAFDADDVAAAKSHAKMSFRCPVTIDSVFAPPAPDQVCTFYESRNHGSKPWGHLSEPEQREWAESCHDNKTLMGFIVYATLFPKLLRNRIKLNAATYHWAHLDSSSAKGRLKLEQRRGAVSRLRRVGFARSLFRGLPHRIDPVADTSILVFMNMSVEEEDERFRFFTNREFSMIYSERGEVGSSSVYSSCSTALSLLWFATTVLARPCCLESIILPINVRERRRMEQRFGCPSHFFDGPIRSFQTTWGGVFAAIGTPHRSIDYTVIEFATSEKYVEGVHVSDAYAAFRATMTAPGDCASIAALVQSYRRSAKHGVESGAVVGALDVIRDRPAGAIGKIDGGVLGTILSTYGETACANVQAECVKLDGGA-SLFDDSVRSKLGEIMTHFDNQLWRARKKDKVERLIVANMDP 439          
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE)

HSP 1 Score: 388 bits (996), Expect = 2.420e-112
Identity = 206/429 (48.02%), Postives = 277/429 (64.57%), Query Frame = 3
Query: 1593 PKREKLTGI-------TSIWRAGFDPTNVTASTPRTKKYKSPVSLKKVFDRPHEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLLPCASENRTKLKSASAHWNELSGSTD--RERLDQRRATYDRLRRNGSALSALHGLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSVYTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHIDGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNLFKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVGKIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVISHSDTTLWKARKRLQVELNVNGSLDP 2852
            PKR K++ I       T++ +  F+   V  +T  T  +K PVS KK+F  P + QV+ FY ARN SG PY RLP A+ LAW ESL DN  L+G+ VYSQL P   ENR KL  AS H+ ++  +T   R++L+QRR    RL+R GSA S  HGLPYSVD +K++L++MN+DF+  D R R F+ RDFA  + +RG+   SSVY SCS+A+ L++FA V LGRP   ESVVLP++V ER VLE+ W CP  H+DG I  ++T+WR VFRAI+ PHRNI Y+ LE+A ++ YI G HV D + LFK TRSAPGD + I      Y   +K G+E G VV  LD++R++PV++VG++DGSVLG+I  T  Q+ S                   T VS KL E+++H D+ LWK RKRL++   V+ +LDP
Sbjct:    8 PKRIKVSSISKVKKQITTLEKPNFNANEVKRATKDTTSFKCPVSPKKIFLEPTDGQVRQFYGARNFSGTPYDRLPQAENLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSARSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTEKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIHLTAAQRSS-------------------TLVSAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDP 417          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig952.21128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
Q8QN77_ESV1K1.460e-22577.62EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K[more]
A0A6H5JJP2_9PHAE6.410e-21476.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B2KWI7_ECTSI1.350e-13552.53EsV-1-213-like protein 1 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5L2T2_9PHAE7.890e-13251.81Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0T8_9PHAE2.620e-12851.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP31_ECTSI6.080e-12648.84EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP... [more]
B2KWI6_ECTSI1.070e-12550.35EsV-1-213-like protein 2 n=1 Tax=Ectocarpus silicu... [more]
D7FZG9_ECTSI1.570e-12481.59EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5J9C0_9PHAE1.940e-11546.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVT4_9PHAE2.420e-11248.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig952contigEcto-sp13_S_contig952:8322..11173 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2854
Hectar predicted targeting categoryother localisation
Exons1
Cds size1275
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464218.134742-UTR-Ecto-sp13_S_contig952:8321..98981681464218.134742-UTR-Ecto-sp13_S_contig952:8321..9898Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig952 8322..9898 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464218.1453197-CDS-Ecto-sp13_S_contig952:9898..111731681464218.1453197-CDS-Ecto-sp13_S_contig952:9898..11173Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig952 9899..11173 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig952.21128.1prot_Ecto-sp13_S_contig952.21128.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig952 9899..11173 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig952.21128.1

>prot_Ecto-sp13_S_contig952.21128.1 ID=prot_Ecto-sp13_S_contig952.21128.1|Name=mRNA_Ecto-sp13_S_contig952.21128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=425bp
MATPTPKREKLTGITSIWRAGFDPTNVTASTPRTKKYKSPVSLKKVFDRP
HEDQVKDFYHARNHSGVPYHRLPDADKLAWTESLHDNRCLMGYLVYSQLL
PCASENRTKLKSASAHWNELSGSTDRERLDQRRATYDRLRRNGSALSALH
GLPYSVDTAKNVLEYMNIDFEQSDLRHRLFMTRDFALTTSERGKVCHSSV
YTSCSTALSLLYFAVVTLGRPCCLESVVLPISVTERSVLEQTWGCPGQHI
DGNINKFQTNWREVFRAIDTPHRNINYVCLEKATEESYIGGKHVADLFNL
FKETRSAPGDTKTITASVNHYRLHSKKGVETGAVVCVLDVLREKPVEAVG
KIDGSVLGAITSTYGQKVSLHVQERCLGLQAGAHSLFDTSVSNKLREVIS
HSDTTLWKARKRLQVELNVNGSLDP
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mRNA from alignment at Ecto-sp13_S_contig952:8322..11173+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig952.21128.1 ID=mRNA_Ecto-sp13_S_contig952.21128.1|Name=mRNA_Ecto-sp13_S_contig952.21128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2852bp|location=Sequence derived from alignment at Ecto-sp13_S_contig952:8322..11173+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGTGCAAGTGATGATGTGCGGCGCGTCTACGAAAAAGGTTCCAAAA TTTTTGTTGCGTTTCTAATGGGCATATGCGGCGAAAAAGGTCAAGTGGTC CGATTGACTTCGGATTTTTTTCATCGTTTGCTGTTGATCCCCGCGCGTCG CGCCAGCAGGGTAGTCCGGATGAAATCGGACACCAGGAGTGTATTCGTCA CACCGCATGCATTTTGCCCAACAGCCCCCGGTGGGTGAACTGCGGGCAAT CACAAAACAAACGCTGAGCAGACGGGGGCTGCGAAATAAAATCCAAATGT CCCGATATGACTCTGCTGTGTCTGGAGACGAACTTGCCCAAATATGGAGA GCAAACTCGTGCTCCCGGCGATGCATTGCCCCTGTTCCTGGGCAGTTGGC TAGGAACCCAGTGCAGCGCCATTTTTTGAAACTGTGTGGAGTGTTTTTTA TTTTAGTCGAACCAGCATGTGTGCCACCGCCCAGCAAACACTCACCCCCA CGCGTACGTTCGGTCCACGACCCAACACAGCCAAAGCAAACAAGCATATG CTAACCTCACCCCTACCCAACTACAGCAAACCGCGAGTCGTCGATGTCAA GCTTCCTCTTCCTCAAAACACGATACTCGGCAAAGAGATTGTCGGGGTGC GACCGGAGCACGTTCACCCTCTCTTTGGCGTGACACACCCGGGACGCACA CTGGATTTTCGTTGCCGACACCGACTGCTTCCTGTCTCTGTACTGTAGAT ACACATTCTCCAGCAACTTGGCGAGAACCTCTCTACTGTACTGTTGGGCG ACCTCGGGATCGATCTCGGATATCGCGCGGGCCATGTAGAGCGCGGTACC AGCCCGTATACATTCGTCCATGTAACTATCGAGACACTCCTCTGCATCCC ATGAAATCTCCCACTCTTCCGTGTAATCTTCAGAGGAGAAATCATCACGA AAGTATACTATAATATGCAGCTGTACACATCACAGAAATCCTCACGTTTG TATCCCTCGCTCAACCAGTAGCACAGCGGTAAACCTGAATTCAGAGGAAT TATAATGTACTTGCGCTTGACCATCTCTTTAATGGTTTCCTTGCGATAGT TGTCGGAAACACGTGAAGAAGGTATCATCAACCTGGATTCTATCCATTCG TTCCACTTGGAAGCGTCATAGGGGATACACGACTCAACATCACGTCCCGT AGCATCGGAGCCATCGGCGACCAGCCAGTCGGCGACATAGAACGCTTGGT GTTGTACTACCACCGCCCAAATAACCGCTTCCTCTTCGAAGGTGTCATAA CCCTCGCGCTCCATGCGACTTATTAGCTGGCGCTGCTCCCACCATGGTAG TTCACCGATAATGCCGGAGAGGAAGTCTTCGTGAGACATCTCGGTAATGA TTGATTGATTTTGCACAGGTTCATGGGTAAGTTAAAATCAACAGTTTTGT CCGTGAACACGCCTGAACCCCCCACACCCCTCATGTAAAATCAGTCTCGT AAGCGTGGCCCCGCTCCATTCGGAACGAATAACTTTTGCATCGCTTTCAC ACCCCACCAGAACTCACACACCCAAACATGGCGACTCCCACACCCAAGCG CGAGAAGCTTACAGGCATCACCAGCATTTGGAGAGCTGGATTCGACCCTA CGAACGTTACCGCGTCTACACCGCGCACCAAAAAATACAAATCGCCCGTG TCCTTGAAAAAGGTGTTTGACCGGCCGCACGAGGACCAGGTTAAGGATTT CTACCATGCTCGAAACCACAGCGGGGTACCATACCACCGCCTACCCGATG CCGACAAGCTCGCCTGGACGGAGTCACTCCACGACAACAGGTGTTTGATG GGCTATCTCGTCTACTCGCAATTGCTCCCATGTGCCTCGGAGAATCGAAC CAAGCTCAAGTCAGCAAGCGCCCACTGGAACGAGCTAAGTGGCTCGACGG ACAGGGAAAGACTGGATCAACGCCGGGCCACGTATGACAGGCTACGGAGG AACGGGTCTGCCCTATCAGCCTTACATGGACTCCCTTACAGCGTGGACAC GGCGAAAAATGTGTTGGAGTACATGAATATCGATTTTGAGCAGAGCGACT TGAGGCACAGATTGTTCATGACCCGCGATTTCGCGTTGACAACGTCGGAG CGCGGGAAGGTATGCCACAGTTCGGTGTACACATCGTGCTCTACAGCACT ATCTCTCCTGTACTTCGCCGTCGTCACTCTGGGGAGACCGTGCTGTCTAG AATCGGTAGTCCTTCCAATCTCAGTGACGGAACGCTCTGTCTTGGAGCAG ACGTGGGGTTGCCCAGGACAGCATATCGACGGCAACATCAACAAGTTTCA GACGAATTGGCGCGAGGTTTTCCGGGCGATCGACACGCCTCACCGGAACA TCAACTATGTGTGTCTGGAGAAAGCAACGGAGGAAAGCTATATCGGCGGG AAACACGTAGCCGACTTGTTTAATTTGTTCAAAGAAACTCGATCGGCTCC CGGGGACACCAAGACCATCACGGCGTCGGTCAACCACTACAGGCTACATT CCAAGAAAGGGGTTGAAACGGGCGCTGTCGTTTGCGTTCTCGATGTGTTG AGGGAAAAGCCCGTGGAAGCCGTCGGAAAGATTGACGGCTCTGTGCTGGG GGCAATCACGTCAACCTACGGGCAAAAGGTGAGCCTCCACGTGCAGGAGA GGTGCCTCGGGCTGCAAGCGGGAGCTCACTCTCTATTCGATACTTCCGTC AGCAACAAGCTGAGGGAGGTCATCAGTCACTCTGACACGACGCTCTGGAA GGCCAGGAAACGACTGCAAGTTGAGCTCAACGTCAACGGCAGCCTGGACC CG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig952:8322..11173+

>mRNA_Ecto-sp13_S_contig952.21128.1 ID=mRNA_Ecto-sp13_S_contig952.21128.1|Name=mRNA_Ecto-sp13_S_contig952.21128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1275bp|location=Sequence derived from alignment at Ecto-sp13_S_contig952:8322..11173+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGACTCCCACACCCAAGCGCGAGAAGCTTACAGGCATCACCAGCAT
TTGGAGAGCTGGATTCGACCCTACGAACGTTACCGCGTCTACACCGCGCA
CCAAAAAATACAAATCGCCCGTGTCCTTGAAAAAGGTGTTTGACCGGCCG
CACGAGGACCAGGTTAAGGATTTCTACCATGCTCGAAACCACAGCGGGGT
ACCATACCACCGCCTACCCGATGCCGACAAGCTCGCCTGGACGGAGTCAC
TCCACGACAACAGGTGTTTGATGGGCTATCTCGTCTACTCGCAATTGCTC
CCATGTGCCTCGGAGAATCGAACCAAGCTCAAGTCAGCAAGCGCCCACTG
GAACGAGCTAAGTGGCTCGACGGACAGGGAAAGACTGGATCAACGCCGGG
CCACGTATGACAGGCTACGGAGGAACGGGTCTGCCCTATCAGCCTTACAT
GGACTCCCTTACAGCGTGGACACGGCGAAAAATGTGTTGGAGTACATGAA
TATCGATTTTGAGCAGAGCGACTTGAGGCACAGATTGTTCATGACCCGCG
ATTTCGCGTTGACAACGTCGGAGCGCGGGAAGGTATGCCACAGTTCGGTG
TACACATCGTGCTCTACAGCACTATCTCTCCTGTACTTCGCCGTCGTCAC
TCTGGGGAGACCGTGCTGTCTAGAATCGGTAGTCCTTCCAATCTCAGTGA
CGGAACGCTCTGTCTTGGAGCAGACGTGGGGTTGCCCAGGACAGCATATC
GACGGCAACATCAACAAGTTTCAGACGAATTGGCGCGAGGTTTTCCGGGC
GATCGACACGCCTCACCGGAACATCAACTATGTGTGTCTGGAGAAAGCAA
CGGAGGAAAGCTATATCGGCGGGAAACACGTAGCCGACTTGTTTAATTTG
TTCAAAGAAACTCGATCGGCTCCCGGGGACACCAAGACCATCACGGCGTC
GGTCAACCACTACAGGCTACATTCCAAGAAAGGGGTTGAAACGGGCGCTG
TCGTTTGCGTTCTCGATGTGTTGAGGGAAAAGCCCGTGGAAGCCGTCGGA
AAGATTGACGGCTCTGTGCTGGGGGCAATCACGTCAACCTACGGGCAAAA
GGTGAGCCTCCACGTGCAGGAGAGGTGCCTCGGGCTGCAAGCGGGAGCTC
ACTCTCTATTCGATACTTCCGTCAGCAACAAGCTGAGGGAGGTCATCAGT
CACTCTGACACGACGCTCTGGAAGGCCAGGAAACGACTGCAAGTTGAGCT
CAACGTCAACGGCAGCCTGGACCCG
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