mRNA_Ecto-sp13_S_contig9513.21123.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A6H5KYQ1_9PHAE (Tim44 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYQ1_9PHAE) HSP 1 Score: 179 bits (454), Expect = 2.070e-51 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 3
Query: 3 SRVVASGSLGQGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR 278
SRVVASGSLG+GAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR
Sbjct: 393 SRVVASGSLGRGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR 484
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A7S2XX10_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX10_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.440e-27 Identity = 48/91 (52.75%), Postives = 69/91 (75.82%), Query Frame = 3
Query: 6 RVVASGSLGQGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR 278
+ + ++GQ A K T D++EDV+E WETSQ P++YKLS+AWD +++E++ GI VRELRRLDP+FS++DWK+D+ E L F+ AFLR
Sbjct: 9 KAIGKSAVGQAAGKVKTTFNDRLEDVREMWETSQSPIIYKLSAAWDMVSSETEVGIAVRELRRLDPNFSIDDWKQDVVENMLRPFLEAFLR 99
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A7S1XKH2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKH2_9STRA) HSP 1 Score: 107 bits (267), Expect = 6.350e-26 Identity = 49/91 (53.85%), Postives = 70/91 (76.92%), Query Frame = 3
Query: 6 RVVASGSLGQGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR 278
R VA S+G+GAK + V+DK++D++EAWETSQHP+VY +SSAWDS+TAE++EG +RELRRLDP F+ E W+ + E P ++A+L+
Sbjct: 146 RDVADSSVGKGAKKVGEKVQDKIDDLKEAWETSQHPIVYGISSAWDSITAETEEGYTLRELRRLDPGFNHETWRYQVTEEICPGLLAAYLK 236
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A6U0VAX0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VAX0_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.700e-23 Identity = 46/91 (50.55%), Postives = 69/91 (75.82%), Query Frame = 3
Query: 6 RVVASGSLGQGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR 278
R VA +G+ A+ + V+D+++D++EAWETSQHP+VY LSSAWDSLTAE++EG +R+LRRLDP+F+ E W+ + E P ++A+L+
Sbjct: 180 RDVADSKIGREAQKVGEKVQDRIDDLKEAWETSQHPVVYGLSSAWDSLTAETEEGYTLRQLRRLDPNFNPEAWRLQVTEEMCPPLLAAYLK 270
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A7S3XJ89_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJ89_HETAK) HSP 1 Score: 98.6 bits (244), Expect = 8.820e-23 Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 3
Query: 6 RVVASGSLGQGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR 278
++V +G+ A A V DK+ED +EAWETSQ+PLVYKLS +D LTA+++E + VRE RRLDP + +WK D+ E FLP F+ AFLR
Sbjct: 112 KLVGRSPVGRAAGKAAGAVGDKLEDAREAWETSQNPLVYKLSGWYDDLTADTEEALAVREFRRLDPGWDPNEWKADVVEDFLPGFLRAFLR 202
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: W7TL62_9STRA (Membrane transporter, Tim44-related/Ribosomal protein L45 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL62_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 8.670e-22 Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 3
Query: 27 LGQGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR 278
LG+ A + ++D+VED +E WETSQ+P+VYKLSS WD LT+E++ GI +RE+RR DP F VEDW + E FLP F A+L+
Sbjct: 380 LGRQAGKLRGKLQDRVEDARELWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLK 463
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A067D249_SAPPC (Tim44 domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D249_SAPPC) HSP 1 Score: 96.7 bits (239), Expect = 1.140e-21 Identity = 45/85 (52.94%), Postives = 62/85 (72.94%), Query Frame = 3
Query: 24 SLGQGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLR 278
++G GAK AKD + D EDV+E WETSQ+P VY+LSS +D L E+ E I +RE+RR DPSF+VE+WK ++ E +P + AFL+
Sbjct: 202 TVGSGAKVAKDKIGDATEDVREYWETSQNPWVYRLSSIYDGLFGETAESIAIREIRRADPSFNVEEWKDNVAESVVPFVLDAFLK 286
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A7R9YWE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YWE6_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.170e-21 Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 3
Query: 36 GAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFL 275
GAK K V ED +EAWETSQ+P VY++SS +D+LTAES+ I V+ELR+LDP F++E+WKRD+ E LPE M+ FL
Sbjct: 85 GAKDVKRKVDHLSEDAREAWETSQNPWVYRVSSVYDTLTAESEYAIAVKELRKLDPDFTLEEWKRDVVEHTLPEVMALFL 164
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A7S1D526_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D526_CYCTE) HSP 1 Score: 92.4 bits (228), Expect = 1.080e-20 Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 3
Query: 36 GAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFL 275
GAK K + D ED +EAWETSQ+P VY++SS +D++TAES+ + +RELR LDP F++EDWK D+ E LP M FL
Sbjct: 83 GAKHVKQKIDDLSEDAREAWETSQNPWVYRISSVYDTVTAESEYTVAIRELRMLDPDFTLEDWKEDVVERTLPRIMEWFL 162
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Match: A0A7S2YSU1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSU1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.520e-20 Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 3
Query: 36 GAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFL 275
GA+ AK+ V + ED +EAWETSQ+P VY++SS +D+LTAES E + V+ELR LDP F+++DW+RD+ E LP+ M FL
Sbjct: 201 GARKAKERVDEIKEDAREAWETSQNPWVYRVSSVYDTLTAESAETLAVKELRELDPEFTLDDWRRDVVEHTLPQIMEWFL 280 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9513.21123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9513.21123.1 >prot_Ecto-sp13_S_contig9513.21123.1 ID=prot_Ecto-sp13_S_contig9513.21123.1|Name=mRNA_Ecto-sp13_S_contig9513.21123.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp LLELWPRGRWDRGPRLRRTRSRTRWRTFRKPGRPASTPSYISCPRRGIA*back to top mRNA from alignment at Ecto-sp13_S_contig9513:638..1225- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9513.21123.1 ID=mRNA_Ecto-sp13_S_contig9513.21123.1|Name=mRNA_Ecto-sp13_S_contig9513.21123.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=588bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9513:638..1225- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9513:638..1225- >mRNA_Ecto-sp13_S_contig9513.21123.1 ID=mRNA_Ecto-sp13_S_contig9513.21123.1|Name=mRNA_Ecto-sp13_S_contig9513.21123.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9513:638..1225- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |