mRNA_Ecto-sp13_S_contig9468.21077.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9468.21077.1
Unique NamemRNA_Ecto-sp13_S_contig9468.21077.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE)

HSP 1 Score: 500 bits (1288), Expect = 2.290e-163
Identity = 284/326 (87.12%), Postives = 298/326 (91.41%), Query Frame = 2
Query:  410 ASVRPRRRSAGSSGSSVPSHRKPEAKLSSPVHTLKRKNRPGTSSSRHEESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAVNNHQEKRVTAPAPTGGKKXXXXQEKKERKLTGMAADQRGAKKARRESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSRPSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 1387
            AS RPRRRS GSSGSSVPSHRKP+  LSS VHTLKRKNRPGTSSSRHEESPA +NRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMV+LFSEA AVNNH+EK VT+ APT GKK    Q KKER++TGM ADQRGAK+ARRESSI E NKG TSKD GGHRGAK IR NETKVNRGMGAS GSVGAIATAAAAGTSEMS K PAAKP VKST +AKEPADTTAPPPQPTSRPS+GMAPSVEMLIL+QAREAAKTEAEASG GRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVN+ELR+KRK+SREAGLKVGVVLEAFV
Sbjct:  192 ASARPRRRSTGSSGSSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKSVTSAAPTEGKKKKQTQAKKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDDGGHRGAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 517          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 3.220e-160
Identity = 280/326 (85.89%), Postives = 291/326 (89.26%), Query Frame = 2
Query:  410 ASVRPRRRSAGSSGSSVPSHRKPEAKLSSPVHTLKRKNRPGTSSSRHEESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAVNNHQEKRVTAPAPTGGKKXXXXQEKKERKLTGMAADQRGAKKARRESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSRPSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 1387
            AS +PRRRS GSSG SVPS  KP+AKLSS VHTLKRKNRPGTSSS HEESPA QNR CLFPGCGARP +GLPGAA AVYCFSHKKGSMVNLFS APAVNNH+EK VT  APT GK+ XXX     RK+TGM ADQRGAKKARRESSIKEDNKGATSKD GGHRGAK  RGNETKVNRG GASEGSVG +ATAAAAGTSEMS K PAAKP VK T KA+EPADT APPPQPTSRPSEGMAPSVEMLIL+QAREAAKTEAEASGGGRR RAPSRRALEASG+L+GDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV
Sbjct:   38 ASAQPRRRSTGSSGPSVPSQCKPKAKLSSSVHTLKRKNRPGTSSSGHEESPAPQNRPCLFPGCGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNNHEEKMVTPAAPTEGKRKXXXXXXXXRKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKNRGNETKVNRGTGASEGSVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSRPSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 1.190e-157
Identity = 273/326 (83.74%), Postives = 290/326 (88.96%), Query Frame = 2
Query:  410 ASVRPRRRSAGSSGSSVPSHRKPEAKLSSPVHTLKRKNRPGTSSSRHEESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAVNNHQEKRVTAPAPTGGKKXXXXQEKKERKLTGMAADQRGAKKARRESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSRPSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 1387
            AS +PRRRS GS+GSSVPSHRKP+AKLSS VH LKRK+RPGTSSSRHEES A Q  SCLFP CGARP +GLPGAARA YCFSHKKGSMV+LFSEAPAVNNH+ KRVT  APT GK+    +  +ERK+TGM ADQRGAKKARRESSIKEDNKGATSKD GGHRGAK IR N+TKVN GMGASE SVGAI TAAAAGTSEMS K PAAKP VK TRK KEPADT  PPPQPTSRPS+GMAPSVEMLIL+QAREAAKTEAEASG GRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVN+ELR+KRK+SREAGLKVGVVLEAFV
Sbjct:  138 ASAQPRRRSTGSTGSSVPSHRKPKAKLSSSVHALKRKSRPGTSSSRHEESRAPQYHSCLFPECGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNHEAKRVTPAAPTEGKRKKQKKGHEERKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKIRDNKTKVNGGMGASEASVGAIVTAAAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 1.440e-152
Identity = 273/326 (83.74%), Postives = 287/326 (88.04%), Query Frame = 2
Query:  410 ASVRPRRRSAGSSGSSVPSHRKPEAKLSSPVHTLKRKNRPGTSSSRHEESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAVNNHQEKRVTAPAPTGGKKXXXXQEKKERKLTGMAADQRGAKKARRESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSRPSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 1387
            AS +PRRRS GSSGS VPSHRKP+AKLSS VHTLKRKNRP  SSS HEESPA QNRSCLFPGC ARPT+GLPGAARAVYCFSHKKGSMVNLFS+APAVNN++EKRVTA APT GK+  XX          M ADQRGAKKARRESSIKEDNKGATSKDGGG++GAK IR NE KVNRG+G SE SVGAIATAAAAGTSEMS K  AAKPPVKST  AKEPADT A PPQPT+RPSEGM+PSVEMLIL+QAREAAK EAEASGGGRR RAPSRRALEASGRLRGDGAQWMTREK+AEQARVNTELREKRKKSREAGL VGVVLEAFV
Sbjct:  138 ASAQPRRRSTGSSGSLVPSHRKPKAKLSSSVHTLKRKNRPEPSSSGHEESPALQNRSCLFPGCDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEKRVTAVAPTEGKRKKXXXXXXXXXXXSMTADQRGAKKARRESSIKEDNKGATSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTNRPSEGMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: A0A6H5JZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL0_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 1.120e-65
Identity = 143/179 (79.89%), Postives = 147/179 (82.12%), Query Frame = 2
Query:  791 LTGMAADQRGAKKARRESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSRPSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELRE 1327
            +TGM ADQRGAKKARRESSIKEDNK ATSKD GGHRGAK I GNETKVN GMG+SEGSV                K PAAKP VKSTRK KEPADT APPPQPTSRPSEGMAPSVEMLIL+QAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQW TREKK  QAR   EL+E
Sbjct:    1 MTGMTADQRGAKKARRESSIKEDNKRATSKDDGGHRGAKKICGNETKVNGGMGSSEGSVXXXXXXXXXXXXXXXXKSPAAKPSVKSTRKVKEPADTIAPPPQPTSRPSEGMAPSVEMLILRQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWKTREKKPGQARX--ELKE 177          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 1.330e-53
Identity = 156/320 (48.75%), Postives = 182/320 (56.88%), Query Frame = 2
Query:  497 PVHTLKRKNRPGTSSSRHEESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAVNNHQEKRVT----APAPTGGKKXXXXQEKKERKLTGMAADQRGAKKARR-ESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSR--PSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV*SPAPTEATPADVESQ 1435
            P    K  NRPG S   +  S + +NRSCLFPGC ARP +GLPGA RAVYCFSHKKG MV LF E PA+ ++  K  T    + APT           K  +      D+  AKKARR +   +EDN    S   G HR  K   G   K  RG  +S    G   T   A TS  S   PA             PA    PP  P +R   S GMAPSVE L+L+QARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE  R+  ELR++RK+ + AGLK GVVLE FV     TEA    +E +
Sbjct:   25 PCSINKGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDNPGKATTGKPRSQAPTEPAAAAASVGTKNPRAPSNI-DRNAAKKARRGQQETEEDNDADVS---GTHRSKKRSSGG--KDERGAISSSTVAGENLTKTTAKTSAPSFPSPA-------------PAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEAAGDGIEER 325          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 2.420e-52
Identity = 170/354 (48.02%), Postives = 200/354 (56.50%), Query Frame = 2
Query:  404 MTASVRPRRRSAGSSG-SSVPSHRKPEAKLSSPVHTLKRKNRPGTSSSRHEESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAVNNHQEKRVTAPAPTGGKKXXXXQE------KKERKLTGMAADQRGAKKARR-ESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSR--PSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV*SPAPTEATPADVESQ 1435
            + AS + R  S GSSG SS  SH KPE    +    LKR NR G S   +  S + +NR+CLFPGC ARP +GLPGA RA+YCF+HKK  MV LF E PA+ N      T     G   XXXX         K R  + +  D+ GAKKARR     +EDN      D GG   +K  R    K  RG  +S    G   T     TS  S  PPA             PA    PP    +R   S GMAPSVE L+L+QAREAAKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE  R+  ELR +RK+ + AGLK GVVLE FV +   TEA    +E +
Sbjct:  230 LVASDQSRLPSTGSSGASSSSSHPKPEETSGTRGQVLKRANRQGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKAGNATTGKRSQGPAAXXXXXXXXSVGANKTRAPSNI--DRNGAKKARRGPQETEEDN----DVDSGGKHTSKKRRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPA-------------PAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEQR 564          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 1.510e-51
Identity = 168/369 (45.53%), Postives = 211/369 (57.18%), Query Frame = 2
Query:  389 IFR*KMTASVRPRRRSAGSSGS-SVPSHRKPEAKLSSPVHTLKRKNRPGTSSSRHEESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAVNNHQEKRVT----APAPTGGKKXXXXQEKK----------ERKLTGMAADQRGAKKARRESSIKEDNKGATSKDGGG-HRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTS--EMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSR--PSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV*SPAPTEATPADVESQ 1435
            I +  + AS + R  S GSSG+ S  SH KP     +    LKR NRPG S   + ES + ++ +CLFPGC ARP +GLPGA RAVYCFSHKKG MV LF E PA+ +   K  T    +  PT    XXXX              ++K      D+ GAK ARR     E++  A   DG G H+  K   G + +            GAI+++   G +  + +AKP A+  P  +      PA    PP  P +R   S GMAPSVE L+L+QARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE  R+  ELR +RK+ + AGLK GVVLE FV +   TEA    +E +
Sbjct:  215 INKGNLAASDQSRLPSTGSSGAPSSSSHPKPGKTSGTRGQVLKRANRPGLSGGNNRESQSSRDSACLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSAGKATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNIDRNGAKNARRGRQETEEDNNA---DGSGTHKSEKRSSGGKDER-----------GAISSSTVTGENLTKTTAKPAASSLPSPA------PAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEER 563          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.730e-37
Identity = 133/287 (46.34%), Postives = 154/287 (53.66%), Query Frame = 2
Query:  530 GTSSSRHEESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAVNNHQEKRVTAPAP------TGGKKXXXXQEKKERKLTGMAA---------DQRGAKKARR-ESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSR--PSEGMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRK 1336
            G SSS     P R +      GC ARP +GLPGA RAVYCFSHKKG MV LF E P++ N   +  +A AP      T GK+              + A         D+ G+KKARR +   +EDN    S   G HR  K   G   K  RG  +S        T   A TS  S   PA             PA    PP  P +R   S GMAPSVE L+L+QARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE  RV  ELR++RK
Sbjct:   73 GRSSSSSHPMPGRTS---ATRGCEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTGKRSQGPAXXXXXXXXSVGAKKTRAPSDIDRNGSKKARRGQQETEEDNDADVS---GTHRSKKRRSGG--KDERGAISSAQVTKENLTKTTAKTSAPSLPSPA-------------PAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRK 338          
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.040e-26
Identity = 111/277 (40.07%), Postives = 142/277 (51.26%), Query Frame = 2
Query:  587 FPGCGARPTHGLPGAARAVYCFSHK--KGSMVNLFSEAPAVNNHQEKRVTAPAPTGGKKXXXXQEKKERKLTGMAADQRGAKKARRESSIKEDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTSEMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSRPSE--GMAPSVEMLILKQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV*SPAPT 1405
            +  C A PT       R  +C S K  + S   L  +       Q   V A  P G  +     +K     TG     +G K  +   S    +K ++SK   G  G K+ RG  +KVN        +   + T  +  T+  S + P +             A  T P   P +R  +  GMAPSVE  +L+QARE AK EA ASGGGRRPRAPSRRALEASG+L+ DGAQWMTRE+KAE+AR   ELRE+R++ + AGLK GVVLEAFV   A T
Sbjct:   28 YAPCTAAPTR------RVSWCISSKNRRTSQTTLSKKTTGTTPRQAPTVAAGVPQGEARAPSNVDK-----TGANKAWQGRKATKDRDSTDGGDKNSSSKKRRGSNGGKDNRGEVSKVNA-------TREDLPTTVSVETTVSSLRSPTS-------------AAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGT 273          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9468.21077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KLI4_9PHAE2.290e-16387.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH07_ECTSI3.220e-16085.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYF0_9PHAE1.190e-15783.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGW8_ECTSI1.440e-15283.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZL0_9PHAE1.120e-6579.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0V0_ECTSI1.330e-5348.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L360_9PHAE2.420e-5248.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LLY6_9PHAE1.510e-5145.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0U7_ECTSI1.730e-3746.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEM4_ECTSI1.040e-2640.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9468contigEcto-sp13_S_contig9468:592..5532 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2718
Hectar predicted targeting categoryother localisation
Exons6
Cds size987
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9468.21077.1prot_Ecto-sp13_S_contig9468.21077.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9468 1920..4167 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464214.4703782-UTR-Ecto-sp13_S_contig9468:591..19191681464214.4703782-UTR-Ecto-sp13_S_contig9468:591..1919Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9468 592..1919 -
1681464214.525596-UTR-Ecto-sp13_S_contig9468:4167..42521681464214.525596-UTR-Ecto-sp13_S_contig9468:4167..4252Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9468 4168..4252 -
1681464214.5371695-UTR-Ecto-sp13_S_contig9468:4705..48411681464214.5371695-UTR-Ecto-sp13_S_contig9468:4705..4841Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9468 4706..4841 -
1681464214.5483673-UTR-Ecto-sp13_S_contig9468:5350..55321681464214.5483673-UTR-Ecto-sp13_S_contig9468:5350..5532Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9468 5351..5532 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464214.4821534-CDS-Ecto-sp13_S_contig9468:1919..27151681464214.4821534-CDS-Ecto-sp13_S_contig9468:1919..2715Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9468 1920..2715 -
1681464214.4933755-CDS-Ecto-sp13_S_contig9468:3069..31481681464214.4933755-CDS-Ecto-sp13_S_contig9468:3069..3148Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9468 3070..3148 -
1681464214.5049543-CDS-Ecto-sp13_S_contig9468:3496..36041681464214.5049543-CDS-Ecto-sp13_S_contig9468:3496..3604Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9468 3497..3604 -
1681464214.5149622-CDS-Ecto-sp13_S_contig9468:4163..41671681464214.5149622-CDS-Ecto-sp13_S_contig9468:4163..4167Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9468 4164..4167 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9468.21077.1

>prot_Ecto-sp13_S_contig9468.21077.1 ID=prot_Ecto-sp13_S_contig9468.21077.1|Name=mRNA_Ecto-sp13_S_contig9468.21077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=329bp
MTASVRPRRRSAGSSGSSVPSHRKPEAKLSSPVHTLKRKNRPGTSSSRHE
ESPARQNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVNLFSEAPAV
NNHQEKRVTAPAPTGGKKKKQTQEKKERKLTGMAADQRGAKKARRESSIK
EDNKGATSKDGGGHRGAKNIRGNETKVNRGMGASEGSVGAIATAAAAGTS
EMSAKPPAAKPPVKSTRKAKEPADTTAPPPQPTSRPSEGMAPSVEMLILK
QAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQA
RVNTELREKRKKSREAGLKVGVVLEAFV*
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mRNA from alignment at Ecto-sp13_S_contig9468:592..5532-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9468.21077.1 ID=mRNA_Ecto-sp13_S_contig9468.21077.1|Name=mRNA_Ecto-sp13_S_contig9468.21077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4941bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9468:592..5532- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTTCCGAAATCGACGCCAACCCCATGTCGTCAAGGCCTCAAGCTGCG CCGGCAGACGAAACATGCGGCACATCCTCCTCGCAATCGCCCGGCGTTTC CCCTACATCCTCCCTGTCGCCACCTCCGACATCCACATCATCTCCGAAGA AGCTGCTGGCCCCAAAGGCTCCTCCCTGCGAGGTACAGACACACGTATTT CGGCGATGATGCTGCACTCTTCATTTACCTTTACAACGTGGATGAATGCA ATTGTTAACCTCTTTAGTAGTTTGTGTGGTCCGTGGTTGAAGCATCTAGG AAAAGGCCCGTAGAGTATGAGGAGTGTGCTGAGCAAGTGGGTAGCCCTGC ACAGCGCACACCGAAGTACTATGTGGCAAGACCGACAAGTTCATGGTCGA GGAAGTTTGTTTTGCATTTTCGAGAAGTATGAGGCTGACACGGTGTTCCA TTCGGAATCGTTGTGTTTTGTGGTTGTGCATTTGTTTGTGCTGTGCCCGT TTCAAGTAGCAAACGAGACCGAAACAGAAAGGGTGAGCACTACATGCCCT CACAGTAGCTTCGTGTCCTCAGGTCGTACCTTTCTTTACGAACATGTGTT CTTAGTGAAAGCGAACACACAAGATAAACATTTTGATAAAGTATCACCGC TCTTTTCGCATTCTGTCTATGCGTGCGTTCATCCCGAGCAGTATCCGGGG TGCCCGAAGTATGCAAAGTATGGCCTGAGGGACGCCCCGCCCAGCAAGTG TCAGGCTCACAAGAGGGCCGGTCAATACACTACCAATCGCCACGGAGAGC TGCTGATGGCAACCCGTGACGGCGACGGTAAGTTACAACCGTGAACCATG CAGCTGCTGCTGCTGCTGTTGTAATTGTTCCTATCGGCATCGATGTTTTC TCAGTCAAGCCCTCTCCCGAAACGAAGTCATCGGGTGGGGGAGGCCTTGC GGGATTGTGGGTACGCCTTCAGAGTACCGGGACACGCTTCCTCTTTCAAA GCCTTACCGAATCGCTTTCACCGTGAGCTACGGTTTATTCCCGACGCTTG ATCAACGTCCGAACATCATTTGCGCATCCCCAACCCGGTCGTTCACCCGT ACAACGTTCTACTCCAGCCTTTCGTAGGGTTGAGTAGTACCGGTTGATCC CTGAGTTCCACACCGTTGTCATCGTTGAAGAGAAGCCCGCCGGCGCCCGC GCCGTCTCATGCTTCGCATCTTTTCGTGTTTCGCGTCATTCTCAAACGGC GGCCATGCCTTTCCTGCTGTGCTACCGTAGCGTTCCGGACACCGGCGGTG GCGGTGCCAGTGCCAGATGTGACGGTGCCCCCCTCCCCAGCCAGCAGTGA ATTTTCAGGTGAAAAATGAGCGTGGTGTTTGTCTAGTATTGTGCCGCCCC TGTGTTTCAGCCTTGGCCCCTAGGGCAGGGCGGAAGTATGCGTTGAACAG AGCATGGCGCGTGTCTTCCACTTCAATGTATGCCCTTGCTTCCGTAGTGG TGGTGGTGTTGCCGTGCCGGCGGCGTTTATTGATTTTTTTGCCGGTGGTC CGCTCATGCCCTGAACCATTGCTACCCGTTCCATGGAAATTGTTGTGTGA GTCGGCTGTAAGCAAGTCCGTCGGGCTAAACTGAGGGATAGCAAACCTGC TCACGTATTTCCAGCCTGGCAGTTCTATCCCACCCGGCGGGTACCCAACC AACGGAGAGATTAATATACATCGCGTGGTGGATGTATCGCGAAGTATGTT TGCCACATGTTTTCCGACCTCTTTCTGGTCTCGAGCAGGCAAAGCGGGTA GCCAATCGGTCGGTTCGTCAATAACGTCCTTTTCAACCGCAACTGCCGCT TAATTCCCGTTCTTTCGTTTGCCGCCGTCTATTTCCACGATCTTCTTTCT CTCTTCGGCTGTTTGACTGGGACGGAAGCGGCATCCGTCCGACCGAGGCG GCGCTCTGCAGGAAGCAGCGGCTCCTCGGTACCCTCTCACCGCAAGCCCG AAGCGAAGCTTTCTTCTCCGGTACACACGTTGAAACGTAAGATACTGGGG GGTGTACCAGCAAGTGGCTCTGACCGGCTGTTGTTTCGTGCGCATGTATG ATACAAGAAGTTGGATGTTTGTGAACGCATTCGGCAATGACACACGAGTT AGCCTGGCGATCTAAACCACTCCCACATATCCCATGGCATTGAGCGTGCG AAGGGATAGCGTTTGTATGCAACGTATTCACTCGAGTTTTTGGCCCACAT AGCCGACACTAGTCCGACTCTGAGTAGGAAACAACTACTTGCGCCCGTTG ACGCACTGCACTTCGATGCGGCAACTCTGCGCTATGCGTGTTCCCAACGC CGGGTTTTGGTCTGGAACTCCAATCGTGCTACAGGCAAGAACCGACCGGG GACATCATCAAGCAGACATGAAGAAAGCCCGGCACGGCAAAACCGCTCCT GCCTCTTTCCAGGGTGAGACAGCGCATAGATCAAACCCAAGCTCTTGGAG AACATATTCGAACTAAATCCTGATCATGCCCGTGCTTGAGAGCTGCGATT GAGGTCGAGGTATCTTTTTGTCTGTCTGTTCAATCGTGGAGGTTGTAGAT CGTTTTCACCGCAGCAGCTGCGGTAGAATGAATGCAACGGCGACAGACCT CGACTTCTGTTCCAACTTATTGACGAAATAAAAGCGATTAGCCCTCGTTC GCGGGGACATAATATTGACTGACGTGTTTCGAGTGCTGTCGAGAGATCAT GTTGTGCTCGTTCGCAACGTTTCGTCCCTTCCGCCTACAACCTGGTGGCA ATCATTTTATGTCTCAGGTGTGGCGCTCGCCCTACCCACGGCCTGCCGGG GGCGGCGCGCGCTGTGTACTGCTTCTCCCACAAGAAGGGCTCGATGGTCA ACCTTTTCAGCGAAGCGCCAGCAGTGAATAACCACCAAGAGAAACGGGTA ACAGCCCCGGCCCCTACCGGGGGCAAGAAGAAGAAGCAGACGCAGGAGAA GAAGGAGCGGAAATTGACCGGCATGGCCGCCGACCAAAGAGGAGCGAAAA AGGCTCGCCGCGAATCAAGCATCAAGGAGGACAACAAAGGCGCCACAAGC AAGGATGGCGGCGGCCACCGAGGTGCCAAGAATATTCGTGGCAACGAAAC GAAAGTGAACAGAGGCATGGGTGCCTCGGAGGGGAGCGTTGGCGCCATTG CCACCGCTGCTGCCGCAGGTACCTCTGAGATGAGCGCGAAACCACCAGCA GCAAAACCACCAGTGAAATCGACCAGGAAAGCAAAAGAACCCGCCGACAC TACGGCACCGCCTCCTCAACCGACCAGCCGGCCGTCGGAGGGAATGGCTC CCTCTGTTGAGATGCTCATTCTGAAGCAGGCGAGGGAGGCGGCCAAGACG GAGGCGGAGGCCAGCGGTGGCGGTCGAAGGCCGCGCGCTCCCTCACGCCG CGCTCTGGAAGCCTCCGGTCGATTGAGGGGCGATGGGGCTCAGTGGATGA CCCGGGAGAAGAAGGCCGAGCAAGCCAGGGTCAACACCGAGCTCCGGGAG AAGAGGAAGAAATCCAGGGAGGCGGGGCTTAAGGTTGGGGTTGTGCTCGA GGCGTTCGTGTGATCGCCGGCACCGACCGAAGCAACACCGGCCGATGTAG AGAGTCAGGGGTGGTGACGGTGGTGGTGGTGGAAGAGGAGGGGTTGTGGG CACGTTGCCGCCATTTCTTTAGCACCCCCTCGGCAGCAGCGGCAGTCATA GACGGGGCGAGGATTTCTTGCCCGCGCCGCGTGAGATAGGCCGGGAAGCG AGCCAGACCGATTCTCAGCGGCAGTATTTGACGGAGGGATATGGTCGTGG TGTGTGTCGCTCACGTGAGGGCAGATGCCTTGTCGGGTGGAGAGCTCAAG GAGCTTTTGTAGGGCTGCTGTTGCTGCAATGCAGCAACCGACGCAGGGAT GCTGTTGTGGACGAACACTGTCTGAAAGAGCGAAACAAAGCGGTGCGTCA TGAGGTGCTCGAGAAAGAAGGTACATTTTAATACGGATATCTCATGCGGC TACCGTGGCGCACGTGTTTTGTGAGGACGACTACCTGCGAGAGAAGATGG GCGCTAATCACGCTGTGTGGACACAGGGGGGATATTCCAGGTGGGAATCT GGCGAACAGAATCATGGTGTCGCACCCGTGTGGGTGGTCGTCTTCAGAGA TATGGAGGATGCGGCTATCTGTCTTTGCCAAGCGTTTTACAATGGGATTG TGTGTTTCCCTGTCGTAGAGACGCGTCTTTGACTTTGATACATATGTTTC GCGCATGTCTGTGAGAGACTCGGTTCTCGTTGGTGGAGCGCCCTCTGTTT GTAACCCTTTTTCGCCGCCACGATGCGACGTGGGTTAGAAGGCATCCCCC GGGACGTATTCTCGTGTGGGTTTGTATCTCCACGCGGTAGAAACTATGGG TAGTAGGTATCTCGTCGGGAGCTTCACTAAGCATGGCACTCTTTGTTGGA AGGCCCTACATCGAGCCAAGACATTGGTCCATCAAGTATGTGGTAAACGT GTGTTGCGTACGTATGCGGCGCGTGTCGTGAGTCGTGAGACGTACGCAAA GGGTAGGCACGAGAAAGGAATCGACCCTTACTTGCGCAAGGGACTTTGTG TTATTTTGTATCGGGAAGGACTAAGCAAGAGGTAGTCGCTGCCGTCAGTT GTAATAAGACGGTACGGGTTAGATTGTATTGTGGATGCCATGTTTCGTGT CGAGTTTCATTGTAGCGGGGAGGTCGCGAAATGTATTGAAGGCCTACTTC ATTTTCTCGTGTTGTCGTTGTTACATGGCATGCCAAAATAATGATATGAC CGCAAACCGAATCGAACATAGTCGAAAAAGTGATGGTGTGCATGTGGCAT ACTTGGTCATGCTGACGAGGAGAAAAAAACTATGGGTGCAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9468:592..5532-

>mRNA_Ecto-sp13_S_contig9468.21077.1 ID=mRNA_Ecto-sp13_S_contig9468.21077.1|Name=mRNA_Ecto-sp13_S_contig9468.21077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=987bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9468:592..5532- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGGCATCCGTCCGACCGAGGCGGCGCTCTGCAGGAAGCAGCGGCTC
CTCGGTACCCTCTCACCGCAAGCCCGAAGCGAAGCTTTCTTCTCCGGTAC
ACACGTTGAAACGCAAGAACCGACCGGGGACATCATCAAGCAGACATGAA
GAAAGCCCGGCACGGCAAAACCGCTCCTGCCTCTTTCCAGGGTGTGGCGC
TCGCCCTACCCACGGCCTGCCGGGGGCGGCGCGCGCTGTGTACTGCTTCT
CCCACAAGAAGGGCTCGATGGTCAACCTTTTCAGCGAAGCGCCAGCAGTG
AATAACCACCAAGAGAAACGGGTAACAGCCCCGGCCCCTACCGGGGGCAA
GAAGAAGAAGCAGACGCAGGAGAAGAAGGAGCGGAAATTGACCGGCATGG
CCGCCGACCAAAGAGGAGCGAAAAAGGCTCGCCGCGAATCAAGCATCAAG
GAGGACAACAAAGGCGCCACAAGCAAGGATGGCGGCGGCCACCGAGGTGC
CAAGAATATTCGTGGCAACGAAACGAAAGTGAACAGAGGCATGGGTGCCT
CGGAGGGGAGCGTTGGCGCCATTGCCACCGCTGCTGCCGCAGGTACCTCT
GAGATGAGCGCGAAACCACCAGCAGCAAAACCACCAGTGAAATCGACCAG
GAAAGCAAAAGAACCCGCCGACACTACGGCACCGCCTCCTCAACCGACCA
GCCGGCCGTCGGAGGGAATGGCTCCCTCTGTTGAGATGCTCATTCTGAAG
CAGGCGAGGGAGGCGGCCAAGACGGAGGCGGAGGCCAGCGGTGGCGGTCG
AAGGCCGCGCGCTCCCTCACGCCGCGCTCTGGAAGCCTCCGGTCGATTGA
GGGGCGATGGGGCTCAGTGGATGACCCGGGAGAAGAAGGCCGAGCAAGCC
AGGGTCAACACCGAGCTCCGGGAGAAGAGGAAGAAATCCAGGGAGGCGGG
GCTTAAGGTTGGGGTTGTGCTCGAGGCGTTCGTGTGA
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