mRNA_Ecto-sp13_S_contig94325.21038.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: D7FGU3_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU3_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 3.610e-16 Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRI 138
FDGVPA+IPGRIEGEE+DYGGEGV YSDTDAGNNGG R ENV I
Sbjct: 761 FDGVPATIPGRIEGEEFDYGGEGVGYSDTDAGNNGGQFRPSENVDI 806
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: A0A6H5JFJ7_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ7_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 2.350e-15 Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRI 138
F+G+PA+IPGR+EGEE+DYGGEGV YSDTDAGNNGG R ENV I
Sbjct: 581 FEGIPATIPGRVEGEEFDYGGEGVGYSDTDAGNNGGQFRTSENVDI 626
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: UPI001F3C47B9 (carbohydrate-binding protein n=1 Tax=Chitinophaga filiformis TaxID=104663 RepID=UPI001F3C47B9) HSP 1 Score: 61.6 bits (148), Expect = 8.540e-10 Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRI 138
++G P +IPG+IE EEYD GG+G+AY+DTDA NNGG+ R E V +
Sbjct: 397 YNGSPLAIPGKIEAEEYDKGGQGIAYNDTDASNNGGLFRPSEGVDL 442
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: X0RZV0_9ZZZZ (Glyco_hydro_3_C domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0RZV0_9ZZZZ) HSP 1 Score: 61.2 bits (147), Expect = 1.140e-9 Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDE 126
F+G P++IPG+IE E++D GGEGVAY DTDAGNNGG R ++
Sbjct: 310 FNGTPSAIPGKIEAEDFDTGGEGVAYHDTDAGNNGGQYRAED 351
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: A0A6H5JEN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEN4_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 2.970e-9 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRIVCG 147
+ G+PA IPG ++ E++D+GGEGV+YSDT GN+GGV R +E+V I G
Sbjct: 105 YGGIPAVIPGMVQAEKFDHGGEGVSYSDTTPGNSGGVFRPNEDVDISGG 153
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: D8LL13_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL13_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 2.980e-9 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRIVCG 147
+ G+PA IPG ++ E++D+GGEGV+YSDT GN+GGV R +E+V I G
Sbjct: 853 YGGIPAVIPGMVQAEKFDHGGEGVSYSDTTPGNSGGVFRPNEDVDISGG 901
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: A0A317M5T5_9BACT (Putative secreted protein (Por secretion system target) n=1 Tax=Chitinophaga sp. S165 TaxID=2135462 RepID=A0A317M5T5_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 5.580e-9 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRI 138
F+G P IPG+IE EEYD GG+GVAYSD D+ NNGG+ R E V +
Sbjct: 397 FNGTPLIIPGKIETEEYDKGGQGVAYSDADSTNNGGLFRPSEGVDL 442
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: A0A3N5W2E5_9BACT (Carbohydrate-binding protein (Fragment) n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A3N5W2E5_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 3.520e-8 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRI 138
+ GVP ++P RIE E+YD GGEG+AY DTD GNNG R E+V +
Sbjct: 93 YHGVPFALPTRIEAEDYDAGGEGIAYHDTDPGNNGNQYRTSEDVDV 138
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: A0A1G9TN35_9BACT (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Catalinimonas alkaloidigena TaxID=1075417 RepID=A0A1G9TN35_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 3.640e-8 Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRI-VCG 147
+ GVP IPGRIE E+YD GG+ +AYSD+D+ N+GG R DE V + CG
Sbjct: 318 YGGVPWPIPGRIESEDYDEGGQAIAYSDSDSTNHGGQYRPDEFVDVETCG 367
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Match: A0A5B2VVK5_9BACT (Carbohydrate-binding protein n=1 Tax=Chitinophaga agrisoli TaxID=2607653 RepID=A0A5B2VVK5_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 3.650e-8 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 1 FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRI 138
F+G P ++PGRIE E+YD GG+G+AYSD D N GG R +E V +
Sbjct: 397 FNGTPFTLPGRIEAEQYDNGGQGIAYSDADTANQGGQFRPNEGVDL 442 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94325.21038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig94325.21038.1 >prot_Ecto-sp13_S_contig94325.21038.1 ID=prot_Ecto-sp13_S_contig94325.21038.1|Name=mRNA_Ecto-sp13_S_contig94325.21038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp FDGVPASIPGRIEGEEYDYGGEGVAYSDTDAGNNGGVSRKDENVRIVCG*back to top mRNA from alignment at Ecto-sp13_S_contig94325:291..440+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig94325.21038.1 ID=mRNA_Ecto-sp13_S_contig94325.21038.1|Name=mRNA_Ecto-sp13_S_contig94325.21038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig94325:291..440+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig94325:291..440+ >mRNA_Ecto-sp13_S_contig94325.21038.1 ID=mRNA_Ecto-sp13_S_contig94325.21038.1|Name=mRNA_Ecto-sp13_S_contig94325.21038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig94325:291..440+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |