mRNA_Ecto-sp13_S_contig9429.21030.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: D8LGT0_ECTSI (Alpha-tubulin folding cofactor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT0_ECTSI) HSP 1 Score: 287 bits (735), Expect = 1.300e-92 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 2
Query: 980 MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR
Sbjct: 1 MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 142
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A6H5KGJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ0_9PHAE) HSP 1 Score: 278 bits (712), Expect = 9.070e-88 Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 2
Query: 980 MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
MAADLAALKDWV AADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQT+GDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSK LGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRV KYRMSEEDYD+REGTLR
Sbjct: 1 MAADLAALKDWVIAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTIGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKMLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVPKYRMSEEDYDRREGTLR 142
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A835ZAK6_9STRA (Putative tubulin-specific chaperone B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK6_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.470e-55 Identity = 91/142 (64.08%), Postives = 112/142 (78.87%), Query Frame = 2
Query: 980 MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
M+AD+AALK WVTAAD + LP G VS+ ++HSN+ A MIELKFDL QT+ VK KIYTHCGT P QKL LRS G+ + L DDS+ LG+YG +SGME+HV D DPFSL+RGG LED+S VQKYRM++E+YD+R+GTLR
Sbjct: 1 MSADMAALKGWVTAADANMYKSLPHGTVSLTVTHSNLKATMIELKFDLHQTIESVKRKIYTHCGTKPDSQKLQLRSAGRVLTMLADDSRMLGYYGAESGMEVHVMDTDPFSLSRGGGLEDVSLVQKYRMTDEEYDQRKGTLR 142
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A7S2W9K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9K5_9STRA) HSP 1 Score: 182 bits (462), Expect = 2.360e-50 Identity = 80/136 (58.82%), Postives = 111/136 (81.62%), Query Frame = 2
Query: 998 ALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
A++D+VT DG Q+ RLP+G+++V+ +HSN++ARMIELKFDL T+G+VK K++ HCGT Q+L L+ GGQ +C+L DDS+ LGFY V+SGM IH+ D+DP+SL+RGG LED S ++KYRMSE+ YDKR+GT+R
Sbjct: 19 AIRDYVTQDDGRQWDRLPQGMIAVHCTHSNVSARMIELKFDLHTTVGEVKSKLHRHCGTPAQFQRLVLKDGGQPICELSDDSRMLGFYSVESGMTIHIIDEDPYSLSRGGGLEDTSLIEKYRMSEDTYDKRKGTVR 154
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A7S3UUL1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUL1_HETAK) HSP 1 Score: 175 bits (444), Expect = 7.750e-48 Identity = 84/138 (60.87%), Postives = 108/138 (78.26%), Query Frame = 2
Query: 992 LAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
L A+++WVTA D EQ+ LP+GVVSV ISHSN+ ARM+ELKFDL ++ VK +I TH GT P Q+L LR G+ +C+L D LG+Y V+SGMEIHV DDDP+SL+RGG LED+S+V+KYRM+EEDYD+R GT+R
Sbjct: 10 LRAIRNWVTAKDHEQYQNLPDGVVSVTISHSNLQARMMELKFDLHDSIQTVKERIRTHVGTAPQYQRLILRLNGEEICELGDGM--LGYYSVESGMEIHVVDDDPYSLSRGGGLEDVSQVEKYRMTEEDYDRRSGTIR 145
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A8J2SV38_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SV38_9STRA) HSP 1 Score: 172 bits (435), Expect = 6.700e-46 Identity = 78/139 (56.12%), Postives = 109/139 (78.42%), Query Frame = 2
Query: 989 DLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
++ ++DWVTA D E ++ LPEGVV +N++HSN+ +M+EL+FDL QT+G+VK +++ H GT Q+L+LR GG + QLDDDSK LGFY V SGM IHVTD DP S+++GGALE+++ V++YRM EE YDKR+GT+R
Sbjct: 74 EMRGVQDWVTARDDENWTLLPEGVVCINVTHSNLNQKMLELRFDLHQTIGEVKARLHLHHGTPSQSQRLTLRDGGVDIAQLDDDSKMLGFYSVTSGMFIHVTDVDPHSISKGGALENVNLVERYRMDEETYDKRKGTVR 212
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A7S2D093_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D093_9STRA) HSP 1 Score: 168 bits (426), Expect = 4.570e-45 Identity = 75/153 (49.02%), Postives = 115/153 (75.16%), Query Frame = 2
Query: 950 SSGNRRSEATMAADLAA-LKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
S+G + +M A++ +++++TA D +Q+S LP+G+V+++ +HSN+ +MIELKFDL T+GD+K +++ HCGT Q+L LR GGQ + LDDDSK +GFY ++SGM IH+ D DPFS++RGG LED+S +QKY+M +E Y+ R+GT+R
Sbjct: 2 SAGLTEAIGSMGAEMRTDIRNYITAGDDQQWSGLPQGMVAIHCTHSNLMKKMIELKFDLHTTIGDLKARLHMHCGTPASAQRLILRDGGQDIAHLDDDSKMMGFYSIESGMTIHIIDTDPFSMSRGGGLEDVSLIQKYKMDDETYEARKGTVR 154
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A7S1TNN8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNN8_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.310e-44 Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 2
Query: 980 MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
MAADLAAL+ +VTA D + +PE +VS+NISHSN+T + IE+KF+ T+GDVK KI HCGT Q L+LRSGG + +LDDDS+ LG+Y + GMEI V D DP SL+ G LED+S V+KYRM+++DYD+REGTLR
Sbjct: 1 MAADLAALRGYVTARDEVAYDLIPEHLVSLNISHSNLTQQHIEIKFERRATIGDVKQKIRQHCGTPAQHQVLTLRSGGSNLARLDDDSRMLGYYSPEHGMEIFVLDTDPHSLSTNGGLEDVSLVEKYRMTDDDYDRREGTLR 142
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A7R9UBU7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBU7_9STRA) HSP 1 Score: 165 bits (418), Expect = 3.200e-44 Identity = 79/142 (55.63%), Postives = 107/142 (75.35%), Query Frame = 2
Query: 980 MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
MAADLAAL+++VTA D E+ +RLP VVS+NI+HSN+ +E++FD S ++ +VK +++ HCGT Q+L LRSGG LDDD++ LG+Y + GME+HV D DP SL++GG LED S ++KYRM+EE YDKREGTLR
Sbjct: 1 MAADLAALRNYVTAKDSEEHARLPAHVVSLNITHSNLAQTHMEIRFDRSSSVAEVKQRLHQHCGTPQQYQRLILRSGGTDYAFLDDDTRMLGYYSPEHGMELHVIDLDPHSLSKGGGLEDTSMIEKYRMTEEAYDKREGTLR 142
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Match: A0A7S2Y1T8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1T8_9STRA) HSP 1 Score: 162 bits (410), Expect = 6.790e-44 Identity = 78/142 (54.93%), Postives = 106/142 (74.65%), Query Frame = 2
Query: 980 MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQTLGDVKGKIYTHCGTNPGMQKLSLRSGGQTMCQLDDDSKKLGFYGVQSGMEIHVTDDDPFSLTRGGALEDLSRVQKYRMSEEDYDKREGTLR 1405
MA L A++ VTA D +QF LP+G+V++N+ HSNI + +E++FDL T+ VK KI HCGT+P Q+L L+S GQ +C+LDD+ +KLGFY SGM+I V D DP SL+R G LED+S+V+KYRMS+E+YDKR GT+R
Sbjct: 1 MAEALRAMRHHVTAVDDQQFQSLPDGIVALNVVHSNIRTKYMEVRFDLHSTIQLVKEKISRHCGTSPEFQRLVLQSEGQPVCELDDNLQKLGFYSPVSGMDIMVFDQDPNSLSRAGGLEDVSQVKKYRMSDEEYDKRSGTMR 142 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9429.21030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9429.21030.1 >prot_Ecto-sp13_S_contig9429.21030.1 ID=prot_Ecto-sp13_S_contig9429.21030.1|Name=mRNA_Ecto-sp13_S_contig9429.21030.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp MAADLAALKDWVTAADGEQFSRLPEGVVSVNISHSNITARMIELKFDLSQback to top mRNA from alignment at Ecto-sp13_S_contig9429:2454..5550+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9429.21030.1 ID=mRNA_Ecto-sp13_S_contig9429.21030.1|Name=mRNA_Ecto-sp13_S_contig9429.21030.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3097bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9429:2454..5550+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9429:2454..5550+ >mRNA_Ecto-sp13_S_contig9429.21030.1 ID=mRNA_Ecto-sp13_S_contig9429.21030.1|Name=mRNA_Ecto-sp13_S_contig9429.21030.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=426bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9429:2454..5550+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |