mRNA_Ecto-sp13_S_contig94133.21011.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig94133.21011.1
Unique NamemRNA_Ecto-sp13_S_contig94133.21011.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: A0A6H5K166_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K166_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.530e-25
Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWY TDVMSKV
Sbjct: 1172 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSKV 1225
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: D7FUM0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUM0_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.840e-24
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            SCFDAESYGALLVVDPEAELGQDEKAKLEMDV +RGLSVVVFADWY TDVMSKV
Sbjct:  897 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVNQRGLSVVVFADWYSTDVMSKV 950
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: A0A2P6NXW7_9EUKA (Membrane-bound transcription factor protease, site 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXW7_9EUKA)

HSP 1 Score: 70.5 bits (171), Expect = 8.060e-13
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            +CFDA++YGAL++VDPE E    E  K+E DV+E GLS+V+FADWY  DVM  V
Sbjct:  677 TCFDAKNYGALVIVDPEEEYFPAEIKKIERDVREEGLSLVIFADWYNVDVMKNV 730
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: A0A7S0M209_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M209_9CRYP)

HSP 1 Score: 67.8 bits (164), Expect = 2.110e-12
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            +CFDA  YG L++VD E   G++E  KLE DV+ERGLS+VV A+WY   VM+K+
Sbjct:  141 TCFDATQYGVLMIVDSEDAFGEEEARKLEGDVRERGLSLVVLAEWYNAQVMAKI 194
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: A0A7S4JLL7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JLL7_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 2.670e-12
Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            +CFDAE+YG LL+VDPE E  ++E+AKL  DV E GL+++VFADWY   VM ++
Sbjct:  147 TCFDAENYGTLLIVDPEDEFHEEEEAKLYHDVMEEGLNLLVFADWYDEGVMDQL 200
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: A0A232EJF7_9HYME (Peptidase_S8 domain-containing protein n=2 Tax=Pteromalinae TaxID=272242 RepID=A0A232EJF7_9HYME)

HSP 1 Score: 68.9 bits (167), Expect = 2.810e-12
Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            +CF+A++YG LL+VDPE E   DE  K++ DV+E+GLS+VVFADWY   VM +V
Sbjct:  703 TCFNAQNYGTLLIVDPEEEFFPDEVLKIKKDVEEKGLSLVVFADWYNVTVMRQV 756
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: UPI0006261FF0 (membrane-bound transcription factor site-1 protease n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI0006261FF0)

HSP 1 Score: 68.9 bits (167), Expect = 2.810e-12
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            +CF A+ YG LL+VD E E   +E AKL++DV+E+GLSVVVFADWY   VM KV
Sbjct:  694 TCFHAKDYGTLLIVDSEEEFFPEEVAKLKVDVEEKGLSVVVFADWYNVTVMRKV 747
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: UPI001ED892CE (membrane-bound transcription factor site-1 protease n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED892CE)

HSP 1 Score: 68.9 bits (167), Expect = 2.810e-12
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            +CFDA SYGALL+VDPE E   +E  KL  DV  RGLSV+VFADWY + VM +V
Sbjct:  730 TCFDARSYGALLLVDPEEEFFPEEIDKLRDDVLTRGLSVIVFADWYNSSVMRRV 783
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: A0A7R9C298_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9C298_9CRUS)

HSP 1 Score: 67.8 bits (164), Expect = 7.130e-12
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            +CFDA++YG LLVVDPE E   +E  KL+ DV+   LS++VFADWY T VM KV
Sbjct:  274 TCFDAQNYGVLLVVDPEEEFFPEEVTKLKRDVESGSLSLLVFADWYNTTVMKKV 327
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BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Match: A0A2G8JLY9_STIJA (Putative membrane-bound transcription factor site-1 protease isoform X3 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JLY9_STIJA)

HSP 1 Score: 67.4 bits (163), Expect = 9.800e-12
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:    1 SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDVMSKV 162
            +CFDAE YG LL+VDPE E   +E  KL  DV + GLSV++FADWY T VM KV
Sbjct:  665 TCFDAEQYGTLLIVDPEEEYFPEEITKLRRDV-DNGLSVIIFADWYNTTVMKKV 717
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94133.21011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K166_9PHAE1.530e-2598.15Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D7FUM0_ECTSI1.840e-2494.44Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A2P6NXW7_9EUKA8.060e-1359.26Membrane-bound transcription factor protease, site... [more]
A0A7S0M209_9CRYP2.110e-1255.56Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S4JLL7_9EUKA2.670e-1257.41Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A232EJF7_9HYME2.810e-1257.41Peptidase_S8 domain-containing protein n=2 Tax=Pte... [more]
UPI0006261FF02.810e-1261.11membrane-bound transcription factor site-1 proteas... [more]
UPI001ED892CE2.810e-1262.96membrane-bound transcription factor site-1 proteas... [more]
A0A7R9C298_9CRUS7.130e-1259.26Hypothetical protein (Fragment) n=1 Tax=Notodromas... [more]
A0A2G8JLY9_STIJA9.800e-1261.11Putative membrane-bound transcription factor site-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94133contigEcto-sp13_S_contig94133:216..380 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score105.1
Seed ortholog evalue1e-20
Seed eggNOG ortholog2880.D7FUM0
Preferred nameMBTPS1
Model size165
KEGG koko:K08653
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000139,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005794,GO:0005795,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006606,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006972,GO:0006984,GO:0006986,GO:0006991,GO:0006996,GO:0007033,GO:0007040,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016485,GO:0016787,GO:0017038,GO:0017171,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0023052,GO:0030968,GO:0031090,GO:0031293,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031984,GO:0032933,GO:0033036,GO:0033365,GO:0033554,GO:0033619,GO:0034504,GO:0034613,GO:0034620,GO:0034976,GO:0035103,GO:0035966,GO:0035967,GO:0036211,GO:0036500,GO:0042175,GO:0042221,GO:0042538,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045540,GO:0045893,GO:0045935,GO:0045944,GO:0046890,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0062012,GO:0065007,GO:0070011,GO:0070013,GO:0070727,GO:0070887,GO:0071310,GO:0071501,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0080171,GO:0090181,GO:0098588,GO:0098791,GO:0098827,GO:0106118,GO:0140096,GO:1901564,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons1
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsCOG1404@1,KOG4266@2759
EC3.4.21.112
Cds size165
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464209.101847-CDS-Ecto-sp13_S_contig94133:215..3801681464209.101847-CDS-Ecto-sp13_S_contig94133:215..380Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig94133 216..380 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94133.21011.1prot_Ecto-sp13_S_contig94133.21011.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig94133 216..380 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig94133.21011.1

>prot_Ecto-sp13_S_contig94133.21011.1 ID=prot_Ecto-sp13_S_contig94133.21011.1|Name=mRNA_Ecto-sp13_S_contig94133.21011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
SCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYGTDV
MSKV*
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mRNA from alignment at Ecto-sp13_S_contig94133:216..380-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig94133.21011.1 ID=mRNA_Ecto-sp13_S_contig94133.21011.1|Name=mRNA_Ecto-sp13_S_contig94133.21011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig94133:216..380- (Ectocarpus species13 EcNAP12_S_4_19m)
TCCTGTTTTGATGCTGAGAGCTACGGAGCGCTACTTGTGGTGGATCCAGA
GGCCGAGTTGGGGCAAGACGAAAAGGCCAAGCTCGAGATGGACGTGAAGG
AGAGAGGCCTGTCGGTGGTGGTGTTTGCCGATTGGTACGGCACGGATGTG
ATGTCCAAGGTATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig94133:216..380-

>mRNA_Ecto-sp13_S_contig94133.21011.1 ID=mRNA_Ecto-sp13_S_contig94133.21011.1|Name=mRNA_Ecto-sp13_S_contig94133.21011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig94133:216..380- (Ectocarpus species13 EcNAP12_S_4_19m)
TCCTGTTTTGATGCTGAGAGCTACGGAGCGCTACTTGTGGTGGATCCAGA
GGCCGAGTTGGGGCAAGACGAAAAGGCCAAGCTCGAGATGGACGTGAAGG
AGAGAGGCCTGTCGGTGGTGGTGTTTGCCGATTGGTACGGCACGGATGTG
ATGTCCAAGGTATAG
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