mRNA_Ecto-sp13_S_contig94099.21005.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig94099.21005.1
Unique NamemRNA_Ecto-sp13_S_contig94099.21005.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.060e-27
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 1 
Query:    1 NDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 180
            NDAFWILALGG+GIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI
Sbjct:  377 NDAFWILALGGIGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 436
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 6.690e-27
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 1 
Query:    1 NDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 180
            +DAFWILALGG GIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI
Sbjct:  321 DDAFWILALGGFGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 380
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.520e-25
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 1 
Query:    1 NDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 180
            ++AFWILALGG GIV GLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMM+IIGTRLEI
Sbjct:  378 DNAFWILALGGFGIVTGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMIIIGTRLEI 437
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 4.680e-24
Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 1 
Query:    1 NDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 180
            N+AFWILA GGLG+VAGLA+YGY IIAAIGVKIAKITPSRGFAIELGSA+ VIIGTRLEI
Sbjct:  388 NNAFWILAFGGLGMVAGLALYGYNIIAAIGVKIAKITPSRGFAIELGSALTVIIGTRLEI 447
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 7.280e-22
Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 1 
Query:    1 NDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 180
            ND FWILALGG GIVAGL IYGYKII+AIGVKI K+TPSR F+I+LGSA+M+IIGTRLEI
Sbjct:  378 NDMFWILALGGAGIVAGLTIYGYKIISAIGVKIPKVTPSRCFSIKLGSAIMIIIGTRLEI 437
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: A0A7S2UTK1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTK1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.850e-20
Identity = 42/58 (72.41%), Postives = 51/58 (87.93%), Query Frame = 1 
Query:    4 DAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLE 177
            DA+WILALGGLGIV GLA YGYKI+AAIGVK+  ++PSRGF IELG+  ++IIG+RLE
Sbjct:    8 DAYWILALGGLGIVIGLATYGYKIMAAIGVKLTPMSPSRGFCIELGATFIIIIGSRLE 65
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: A0A6C0FAM7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0FAM7_9ZZZZ)

HSP 1 Score: 86.7 bits (213), Expect = 1.950e-18
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 1 
Query:    1 NDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 180
             DA+WILALGG GI  GLA+YGYKII AIG+K+ KITPSRG AIEL SA+++I G+RLEI
Sbjct:  395 TDAYWILALGGAGIALGLALYGYKIIQAIGLKLCKITPSRGVAIELASALVIITGSRLEI 454
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: G9E5H5_9PHYC (Phosphate permease n=1 Tax=Ostreococcus lucimarinus virus OlV4 TaxID=754063 RepID=G9E5H5_9PHYC)

HSP 1 Score: 82.4 bits (202), Expect = 2.680e-18
Identity = 38/58 (65.52%), Postives = 51/58 (87.93%), Query Frame = 1 
Query:    1 NDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRL 174
            NDA+WIL+LG  GIVAGL++YGYKI+ A+G K+AK+TPSRG  IELG+A ++I+G+RL
Sbjct:   48 NDAYWILSLGATGIVAGLSLYGYKILNALGTKMAKLTPSRGICIELGAAAVIILGSRL 105
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: A0A7S3YL38_9EUKA (Phosphate transporter n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YL38_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 2.750e-18
Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 1 
Query:    4 DAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEI 180
            DA+WILA+GGLGIV GLA YGY I+ AIG+K+AKITPSRG  IELGSA ++I G+RLE+
Sbjct:  449 DAYWILAIGGLGIVVGLATYGYHIVRAIGIKLAKITPSRGTCIELGSAAVIITGSRLEL 507
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BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Match: A0A6S9IV20_HETAK (Phosphate transporter n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IV20_HETAK)

HSP 1 Score: 85.9 bits (211), Expect = 3.630e-18
Identity = 41/58 (70.69%), Postives = 53/58 (91.38%), Query Frame = 1 
Query:    4 DAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLE 177
            DA+WIL LGGLGIV GLA YGYKI+AAIGV+I++ITPSRGF IE+G+ ++V++G+RLE
Sbjct:  394 DAYWILFLGGLGIVLGLATYGYKIMAAIGVQISRITPSRGFCIEMGATVIVVMGSRLE 451
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94099.21005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNE7_9PHAE1.060e-2798.33Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A6H5JNL8_9PHAE6.690e-2796.67Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G0K9_ECTSI2.520e-2591.67Phosphate transporter n=2 Tax=Ectocarpus siliculos... [more]
D7FWT9_ECTSI4.680e-2488.33Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D7FZJ7_ECTSI7.280e-2281.67Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2UTK1_9STRA2.850e-2072.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6C0FAM7_9ZZZZ1.950e-1871.67Uncharacterized protein n=1 Tax=viral metagenome T... [more]
G9E5H5_9PHYC2.680e-1865.52Phosphate permease n=1 Tax=Ostreococcus lucimarinu... [more]
A0A7S3YL38_9EUKA2.750e-1871.19Phosphate transporter n=3 Tax=Lotharella globosa T... [more]
A0A6S9IV20_HETAK3.630e-1870.69Phosphate transporter n=3 Tax=Heterosigma akashiwo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94099contigEcto-sp13_S_contig94099:27..489 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score111.3
Seed ortholog evalue1.6e-22
Seed eggNOG ortholog2880.D7G0K8
Preferred namePHO89
Model size182
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
Exons2
EggNOG free text desc.inorganic phosphate transmembrane transporter activity
EggNOG OGsCOG0306@1,KOG2493@2759
EC3.4.14.10
Cds size180
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464208.498549-CDS-Ecto-sp13_S_contig94099:26..911681464208.498549-CDS-Ecto-sp13_S_contig94099:26..91Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig94099 27..91 +
1681464208.5116847-CDS-Ecto-sp13_S_contig94099:372..4871681464208.5116847-CDS-Ecto-sp13_S_contig94099:372..487Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig94099 373..487 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94099.21005.1prot_Ecto-sp13_S_contig94099.21005.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig94099 27..487 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig94099.21005.1

>prot_Ecto-sp13_S_contig94099.21005.1 ID=prot_Ecto-sp13_S_contig94099.21005.1|Name=mRNA_Ecto-sp13_S_contig94099.21005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
NDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAM
MVIIGTRLEI
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mRNA from alignment at Ecto-sp13_S_contig94099:27..489+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig94099.21005.1 ID=mRNA_Ecto-sp13_S_contig94099.21005.1|Name=mRNA_Ecto-sp13_S_contig94099.21005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=463bp|location=Sequence derived from alignment at Ecto-sp13_S_contig94099:27..489+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACGACGCCTTCTGGATCCTCGCCCTCGGCGGCCTTGGTATCGTTGCCGG
GCTTGCCATCTACGGGTAAGCAAGTTTGCCAAGGCGACAAAGCAGACATC
ATGTCGTTCGCCATACCTTGCCGAGCCGTATGCATATGTTAACGTTTAGC
TGAAATGAAGCCGTGCCTAAGCCCTTCCTTAAAGGAACGTCGAAAATGAG
TAGACATGTCCAGAAGATACCTAGGACACATGCGGGGATTCTGGTGTGGT
GTACTTACCAGGCCCTGCTTTCTCGTGACGTATGACACTCACATTTTCTG
ACATGGTGCCTCACGCCTTGCCATTTTTACCATCTGACGACGTCAGGTAC
AAGATCATCGCTGCCATCGGCGTCAAGATCGCAAAGATCACGCCTTCCCG
TGGTTTCGCGATCGAGCTCGGTTCCGCAATGATGGTCATCATCGGCACCC
GGCTCGAGATCCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig94099:27..489+

>mRNA_Ecto-sp13_S_contig94099.21005.1 ID=mRNA_Ecto-sp13_S_contig94099.21005.1|Name=mRNA_Ecto-sp13_S_contig94099.21005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=180bp|location=Sequence derived from alignment at Ecto-sp13_S_contig94099:27..489+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACGACGCCTTCTGGATCCTCGCCCTCGGCGGCCTTGGTATCGTTGCCGG
GCTTGCCATCTACGGGTACAAGATCATCGCTGCCATCGGCGTCAAGATCG
CAAAGATCACGCCTTCCCGTGGTTTCGCGATCGAGCTCGGTTCCGCAATG
ATGGTCATCATCGGCACCCGGCTCGAGATC
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